RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 PBRM1Q86U86 1689 aa15.72■□□□□ 0.11
FOXO3-203ENST00000540898 FHOD3Q2V2M9 1422 aa15.72■□□□□ 0.11
FOXO3-203ENST00000540898 APLP2Q06481 763 aa15.7■□□□□ 0.1
FOXO3-203ENST00000540898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
FOXO3-203ENST00000540898 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
FOXO3-203ENST00000540898 ATP1B4Q9UN42 357 aaPredicted RBP15.68■□□□□ 0.1
FOXO3-203ENST00000540898 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
FOXO3-203ENST00000540898 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
FOXO3-203ENST00000540898 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
FOXO3-203ENST00000540898 ADAMTS12P58397 1594 aa15.64■□□□□ 0.09
FOXO3-203ENST00000540898 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
FOXO3-203ENST00000540898 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
FOXO3-203ENST00000540898 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
FOXO3-203ENST00000540898 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
FOXO3-203ENST00000540898 PCF11O94913 1555 aaKnown RBP15.61■□□□□ 0.09
FOXO3-203ENST00000540898 FBLN2P98095 1184 aa15.61■□□□□ 0.09
FOXO3-203ENST00000540898 MYT1Q01538 1121 aa15.6■□□□□ 0.09
FOXO3-203ENST00000540898 ARID3CA6NKF2 412 aa15.55■□□□□ 0.08
FOXO3-203ENST00000540898 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
FOXO3-203ENST00000540898 SAMD9Q5K651 1589 aa15.53■□□□□ 0.08
FOXO3-203ENST00000540898 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.08
FOXO3-203ENST00000540898 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
FOXO3-203ENST00000540898 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
FOXO3-203ENST00000540898 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
FOXO3-203ENST00000540898 IQGAP2Q13576 1575 aa15.5■□□□□ 0.07
FOXO3-203ENST00000540898 ITGAEP38570 1179 aa15.5■□□□□ 0.07
FOXO3-203ENST00000540898 LRRIQ1Q96JM4 1722 aa15.49■□□□□ 0.07
FOXO3-203ENST00000540898 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
FOXO3-203ENST00000540898 CEP170Q5SW79 1584 aa15.47■□□□□ 0.07
FOXO3-203ENST00000540898 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
FOXO3-203ENST00000540898 PHLDB1Q86UU1 1377 aa15.46■□□□□ 0.07
FOXO3-203ENST00000540898 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
FOXO3-203ENST00000540898 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
FOXO3-203ENST00000540898 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
FOXO3-203ENST00000540898 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
FOXO3-203ENST00000540898 CFAP43Q8NDM7 1665 aa15.43■□□□□ 0.06
FOXO3-203ENST00000540898 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
FOXO3-203ENST00000540898 KIAA0586Q9BVV6 1533 aa15.42■□□□□ 0.06
FOXO3-203ENST00000540898 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
FOXO3-203ENST00000540898 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
FOXO3-203ENST00000540898 UGGT2Q9NYU1 1516 aa15.38■□□□□ 0.05
FOXO3-203ENST00000540898 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
FOXO3-203ENST00000540898 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
FOXO3-203ENST00000540898 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
FOXO3-203ENST00000540898 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
FOXO3-203ENST00000540898 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
FOXO3-203ENST00000540898 JPH4Q96JJ6 628 aa15.34■□□□□ 0.05
FOXO3-203ENST00000540898 NUP160Q12769 1436 aa15.34■□□□□ 0.05
FOXO3-203ENST00000540898 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
FOXO3-203ENST00000540898 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
FOXO3-203ENST00000540898 CHD1O14646 1710 aa15.32■□□□□ 0.04
FOXO3-203ENST00000540898 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
FOXO3-203ENST00000540898 EPRSP07814 1512 aaKnown RBP15.3■□□□□ 0.04
FOXO3-203ENST00000540898 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
FOXO3-203ENST00000540898 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.04
FOXO3-203ENST00000540898 HECW1Q76N89 1606 aa15.26■□□□□ 0.03
FOXO3-203ENST00000540898 ERCC6L2Q5T890 1561 aa15.23■□□□□ 0.03
FOXO3-203ENST00000540898 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
FOXO3-203ENST00000540898 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
FOXO3-203ENST00000540898 RAPGEF6Q8TEU7 1601 aa15.22■□□□□ 0.03
FOXO3-203ENST00000540898 PTPRKQ15262 1439 aa15.21■□□□□ 0.03
FOXO3-203ENST00000540898 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.02
FOXO3-203ENST00000540898 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.02
FOXO3-203ENST00000540898 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
FOXO3-203ENST00000540898 RAB3GAP2Q9H2M9 1393 aa15.2■□□□□ 0.02
FOXO3-203ENST00000540898 SUPT6HQ7KZ85 1726 aaKnown RBP15.19■□□□□ 0.02
FOXO3-203ENST00000540898 CARMIL2Q6F5E8 1435 aa15.18■□□□□ 0.02
FOXO3-203ENST00000540898 MYOM3Q5VTT5 1437 aa15.18■□□□□ 0.02
FOXO3-203ENST00000540898 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
FOXO3-203ENST00000540898 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
FOXO3-203ENST00000540898 CHIC2Q9UKJ5 165 aa15.15■□□□□ 0.02
FOXO3-203ENST00000540898 PTPN23Q9H3S7 1636 aa15.12■□□□□ 0.01
FOXO3-203ENST00000540898 KIF14Q15058 1648 aa15.12■□□□□ 0.01
FOXO3-203ENST00000540898 PTPRGP23470 1445 aa15.12■□□□□ 0.01
FOXO3-203ENST00000540898 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
FOXO3-203ENST00000540898 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
FOXO3-203ENST00000540898 ABCA8O94911 1581 aa15.11■□□□□ 0.01
FOXO3-203ENST00000540898 ATP10BO94823 1461 aa15.1■□□□□ 0.01
FOXO3-203ENST00000540898 RRP7BPQ9NSQ0 103 aa15.09■□□□□ 0.01
FOXO3-203ENST00000540898 SHROOM2Q13796 1616 aa15.08■□□□□ 0
FOXO3-203ENST00000540898 NEUROD1Q13562 356 aa15.07■□□□□ 0
FOXO3-203ENST00000540898 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
FOXO3-203ENST00000540898 TROQ12816 1431 aaPredicted RBP15.05■□□□□ 0
FOXO3-203ENST00000540898 MAPKBP1O60336 1514 aa15.05■□□□□ 0
FOXO3-203ENST00000540898 CLASP1Q7Z460 1538 aa15.05■□□□□ 0
FOXO3-203ENST00000540898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.05■□□□□ -0
FOXO3-203ENST00000540898 SIN3AQ96ST3 1273 aa15.04■□□□□ -0
FOXO3-203ENST00000540898 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
FOXO3-203ENST00000540898 KDM6BO15054 1643 aa15.02■□□□□ -0
FOXO3-203ENST00000540898 NAIPQ13075 1403 aa15.02□□□□□ -0.01
FOXO3-203ENST00000540898 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
FOXO3-203ENST00000540898 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
FOXO3-203ENST00000540898 PLEKHD1A6NEE1 506 aa15.01□□□□□ -0.01
FOXO3-203ENST00000540898 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
FOXO3-203ENST00000540898 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
FOXO3-203ENST00000540898 UACAQ9BZF9 1416 aa14.99□□□□□ -0.01
FOXO3-203ENST00000540898 HFM1A2PYH4 1435 aa14.98□□□□□ -0.01
FOXO3-203ENST00000540898 MIA2Q96PC5 1412 aa14.97□□□□□ -0.01
FOXO3-203ENST00000540898 ABCC5O15440 1437 aa14.97□□□□□ -0.01
FOXO3-203ENST00000540898 KCNH8Q96L42 1107 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms