RNA–Protein interactions for RNA: ENST00000540771.5

RAB6A-206, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB6A, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-206ENST00000540771 ARHGEF11O15085 1522 aa36.85■■■■□ 3.49
RAB6A-206ENST00000540771 KIF21BO75037 1637 aa36.85■■■■□ 3.49
RAB6A-206ENST00000540771 SHROOM2Q13796 1616 aa36.82■■■■□ 3.49
RAB6A-206ENST00000540771 RIMBP3CA6NJZ7 1639 aa36.77■■■■□ 3.48
RAB6A-206ENST00000540771 RIMBP3BA6NNM3 1639 aa36.77■■■■□ 3.48
RAB6A-206ENST00000540771 RIMBP3Q9UFD9 1639 aa36.77■■■■□ 3.48
RAB6A-206ENST00000540771 IQGAP2Q13576 1575 aa36.75■■■■□ 3.47
RAB6A-206ENST00000540771 PRG4Q92954 1404 aaPredicted RBP36.72■■■■□ 3.47
RAB6A-206ENST00000540771 GOLGA3Q08378 1498 aa36.69■■■■□ 3.46
RAB6A-206ENST00000540771 CTTNBP2Q8WZ74 1663 aa36.68■■■■□ 3.46
RAB6A-206ENST00000540771 ERCC6L2Q5T890 1561 aa36.65■■■■□ 3.46
RAB6A-206ENST00000540771 EHMT2Q96KQ7 1210 aa36.62■■■■□ 3.45
RAB6A-206ENST00000540771 UGGT2Q9NYU1 1516 aa36.61■■■■□ 3.45
RAB6A-206ENST00000540771 UBTFP17480 764 aaKnown RBP36.6■■■■□ 3.45
RAB6A-206ENST00000540771 ARAP1Q96P48 1450 aa36.59■■■■□ 3.45
RAB6A-206ENST00000540771 CARMIL2Q6F5E8 1435 aa36.55■■■■□ 3.44
RAB6A-206ENST00000540771 CYB5RLQ6IPT4 315 aa36.54■■■■□ 3.44
RAB6A-206ENST00000540771 DISP1Q96F81 1524 aa36.5■■■■□ 3.43
RAB6A-206ENST00000540771 TNIKQ9UKE5 1360 aa36.41■■■■□ 3.42
RAB6A-206ENST00000540771 KIAA0556O60303 1618 aa36.39■■■■□ 3.42
RAB6A-206ENST00000540771 PTPRGP23470 1445 aa36.35■■■■□ 3.41
RAB6A-206ENST00000540771 RANGAP1P46060 587 aaPredicted RBP36.33■■■■□ 3.41
RAB6A-206ENST00000540771 SAMD9Q5K651 1589 aa36.3■■■■□ 3.4
RAB6A-206ENST00000540771 LOC105371045A0A1W2PR82 267 aa36.28■■■■□ 3.4
RAB6A-206ENST00000540771 P3H3Q8IVL6 736 aa36.27■■■■□ 3.4
RAB6A-206ENST00000540771 TTBK1Q5TCY1 1321 aaPredicted RBP36.26■■■■□ 3.39
RAB6A-206ENST00000540771 EFCAB5A4FU69 1503 aa36.23■■■■□ 3.39
RAB6A-206ENST00000540771 ARHGAP35Q9NRY4 1499 aa36.13■■■■□ 3.37
RAB6A-206ENST00000540771 FHOD3Q2V2M9 1422 aa36.13■■■■□ 3.37
RAB6A-206ENST00000540771 UACAQ9BZF9 1416 aa36.12■■■■□ 3.37
RAB6A-206ENST00000540771 UHRF1BP1LA0JNW5 1464 aa36.07■■■■□ 3.37
RAB6A-206ENST00000540771 CLIP1P30622 1438 aa36.06■■■■□ 3.36
RAB6A-206ENST00000540771 ADCY10Q96PN6 1610 aa36.05■■■■□ 3.36
RAB6A-206ENST00000540771 PLB1Q6P1J6 1458 aa36.03■■■■□ 3.36
RAB6A-206ENST00000540771 ABCC2Q92887 1545 aa36.01■■■■□ 3.36
RAB6A-206ENST00000540771 ABCA8O94911 1581 aa36■■■■□ 3.35
RAB6A-206ENST00000540771 NPM1P06748 294 aaKnown RBP eCLIP35.99■■■■□ 3.35
RAB6A-206ENST00000540771 CEP162Q5TB80 1403 aa35.98■■■■□ 3.35
RAB6A-206ENST00000540771 FMN1Q68DA7 1419 aa35.92■■■■□ 3.34
RAB6A-206ENST00000540771 KDM5BQ9UGL1 1544 aa35.88■■■■□ 3.33
RAB6A-206ENST00000540771 RAPGEF6Q8TEU7 1601 aa35.86■■■■□ 3.33
RAB6A-206ENST00000540771 MAPKBP1O60336 1514 aa35.78■■■■□ 3.32
RAB6A-206ENST00000540771 NUP153P49790 1475 aaKnown RBP35.77■■■■□ 3.32
RAB6A-206ENST00000540771 ATP10BO94823 1461 aa35.74■■■■□ 3.31
RAB6A-206ENST00000540771 ZCCHC11Q5TAX3 1644 aaKnown RBP35.74■■■■□ 3.31
RAB6A-206ENST00000540771 ARID3CA6NKF2 412 aa35.71■■■■□ 3.31
RAB6A-206ENST00000540771 CASKIN1Q8WXD9 1431 aa35.69■■■■□ 3.3
RAB6A-206ENST00000540771 ASXL2Q76L83 1435 aa35.68■■■■□ 3.3
RAB6A-206ENST00000540771 ATP1B4Q9UN42 357 aaPredicted RBP35.67■■■■□ 3.3
RAB6A-206ENST00000540771 TRHP20396 242 aaPredicted RBP35.64■■■■□ 3.3
RAB6A-206ENST00000540771 HECW1Q76N89 1606 aa35.64■■■■□ 3.3
RAB6A-206ENST00000540771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.62■■■■□ 3.29
RAB6A-206ENST00000540771 HNRNPUL2Q1KMD3 747 aaKnown RBP35.62■■■■□ 3.29
RAB6A-206ENST00000540771 PCF11O94913 1555 aaKnown RBP35.6■■■■□ 3.29
RAB6A-206ENST00000540771 FYCO1Q9BQS8 1478 aa35.6■■■■□ 3.29
RAB6A-206ENST00000540771 ABCC10Q5T3U5 1492 aa35.59■■■■□ 3.29
RAB6A-206ENST00000540771 EPRSP07814 1512 aaKnown RBP35.58■■■■□ 3.29
RAB6A-206ENST00000540771 WDR7Q9Y4E6 1490 aa35.56■■■■□ 3.28
RAB6A-206ENST00000540771 VPS8Q8N3P4 1428 aa35.54■■■■□ 3.28
RAB6A-206ENST00000540771 CDK13Q14004 1512 aaKnown RBP35.53■■■■□ 3.28
RAB6A-206ENST00000540771 FAM69CQ0P6D2 419 aa35.51■■■■□ 3.28
RAB6A-206ENST00000540771 PLEKHD1A6NEE1 506 aa35.5■■■■□ 3.27
RAB6A-206ENST00000540771 DIP2BQ9P265 1576 aa35.49■■■■□ 3.27
RAB6A-206ENST00000540771 CCDC18Q5T9S5 1454 aa35.48■■■■□ 3.27
RAB6A-206ENST00000540771 KCNH8Q96L42 1107 aa35.45■■■■□ 3.27
RAB6A-206ENST00000540771 CDK11AQ9UQ88 783 aaPredicted RBP35.45■■■■□ 3.27
RAB6A-206ENST00000540771 LRRIQ1Q96JM4 1722 aa35.43■■■■□ 3.26
RAB6A-206ENST00000540771 GLI2P10070 1586 aa35.42■■■■□ 3.26
RAB6A-206ENST00000540771 KIF13AQ9H1H9 1805 aa35.41■■■■□ 3.26
RAB6A-206ENST00000540771 TROQ12816 1431 aaPredicted RBP35.31■■■■□ 3.24
RAB6A-206ENST00000540771 MAGI3Q5TCQ9 1506 aa35.23■■■■□ 3.23
RAB6A-206ENST00000540771 MAP3K4Q9Y6R4 1608 aa35.23■■■■□ 3.23
RAB6A-206ENST00000540771 CD109Q6YHK3 1445 aa35.22■■■■□ 3.23
RAB6A-206ENST00000540771 ABCA9Q8IUA7 1624 aa35.21■■■■□ 3.23
RAB6A-206ENST00000540771 MAP3K1Q13233 1512 aa35.2■■■■□ 3.23
RAB6A-206ENST00000540771 CFAP43Q8NDM7 1665 aa35.19■■■■□ 3.22
RAB6A-206ENST00000540771 TIAM1Q13009 1591 aa35.18■■■■□ 3.22
RAB6A-206ENST00000540771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.16■■■■□ 3.22
RAB6A-206ENST00000540771 MTUS2Q5JR59 1369 aa35.16■■■■□ 3.22
RAB6A-206ENST00000540771 APLP2Q06481 763 aa35.14■■■■□ 3.22
RAB6A-206ENST00000540771 KIF14Q15058 1648 aa35.13■■■■□ 3.21
RAB6A-206ENST00000540771 TSPOAP1O95153 1857 aa35.09■■■■□ 3.21
RAB6A-206ENST00000540771 PPRC1Q5VV67 1664 aaKnown RBP35.09■■■■□ 3.21
RAB6A-206ENST00000540771 EHBP1L1Q8N3D4 1523 aa35.08■■■■□ 3.21
RAB6A-206ENST00000540771 TEX14Q8IWB6 1497 aa35.08■■■■□ 3.21
RAB6A-206ENST00000540771 TTC37Q6PGP7 1564 aa35.08■■■■□ 3.21
RAB6A-206ENST00000540771 LRRC9Q6ZRR7 1453 aa35.06■■■■□ 3.2
RAB6A-206ENST00000540771 KANK4Q5T7N3 995 aaPredicted RBP35.04■■■■□ 3.2
RAB6A-206ENST00000540771 PLCH2O75038 1416 aa35.01■■■■□ 3.2
RAB6A-206ENST00000540771 ARAP3Q8WWN8 1544 aa34.93■■■■□ 3.18
RAB6A-206ENST00000540771 PHLDB1Q86UU1 1377 aa34.93■■■■□ 3.18
RAB6A-206ENST00000540771 NEO1Q92859 1461 aa34.92■■■■□ 3.18
RAB6A-206ENST00000540771 NCOA2Q15596 1464 aa34.9■■■■□ 3.18
RAB6A-206ENST00000540771 MYO5CQ9NQX4 1742 aa34.9■■■■□ 3.18
RAB6A-206ENST00000540771 EFCAB2Q5VUJ9 269 aa34.9■■■■□ 3.18
RAB6A-206ENST00000540771 FANCAO15360 1455 aa34.9■■■■□ 3.18
RAB6A-206ENST00000540771 SUPT6HQ7KZ85 1726 aaKnown RBP34.89■■■■□ 3.18
RAB6A-206ENST00000540771 CCNB3Q8WWL7 1395 aa34.89■■■■□ 3.18
RAB6A-206ENST00000540771 GPATCH8Q9UKJ3 1502 aaKnown RBP34.89■■■■□ 3.18
RAB6A-206ENST00000540771 AKNAQ7Z591 1439 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms