RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
MDM1-210ENST00000540418 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
MDM1-210ENST00000540418 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
MDM1-210ENST00000540418 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
MDM1-210ENST00000540418 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
MDM1-210ENST00000540418 KIF21BO75037 1637 aa24.56■■□□□ 1.52
MDM1-210ENST00000540418 PRG4Q92954 1404 aaPredicted RBP24.53■■□□□ 1.52
MDM1-210ENST00000540418 IQGAP2Q13576 1575 aa24.53■■□□□ 1.52
MDM1-210ENST00000540418 EHMT2Q96KQ7 1210 aa24.47■■□□□ 1.51
MDM1-210ENST00000540418 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
MDM1-210ENST00000540418 GOLGA3Q08378 1498 aa24.46■■□□□ 1.51
MDM1-210ENST00000540418 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
MDM1-210ENST00000540418 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
MDM1-210ENST00000540418 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
MDM1-210ENST00000540418 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
MDM1-210ENST00000540418 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
MDM1-210ENST00000540418 CARMIL2Q6F5E8 1435 aa24.41■■□□□ 1.5
MDM1-210ENST00000540418 DISP1Q96F81 1524 aa24.36■■□□□ 1.49
MDM1-210ENST00000540418 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
MDM1-210ENST00000540418 RANGAP1P46060 587 aaPredicted RBP24.29■■□□□ 1.48
MDM1-210ENST00000540418 PTPRGP23470 1445 aa24.28■■□□□ 1.48
MDM1-210ENST00000540418 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
MDM1-210ENST00000540418 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
MDM1-210ENST00000540418 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
MDM1-210ENST00000540418 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
MDM1-210ENST00000540418 SAMD9Q5K651 1589 aa24.2■■□□□ 1.47
MDM1-210ENST00000540418 EFCAB5A4FU69 1503 aa24.17■■□□□ 1.46
MDM1-210ENST00000540418 UACAQ9BZF9 1416 aa24.12■■□□□ 1.45
MDM1-210ENST00000540418 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
MDM1-210ENST00000540418 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
MDM1-210ENST00000540418 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
MDM1-210ENST00000540418 UHRF1BP1LA0JNW5 1464 aa24.07■■□□□ 1.44
MDM1-210ENST00000540418 NPM1P06748 294 aaKnown RBP eCLIP24.07■■□□□ 1.44
MDM1-210ENST00000540418 PLB1Q6P1J6 1458 aa24.05■■□□□ 1.44
MDM1-210ENST00000540418 CLIP1P30622 1438 aa24.05■■□□□ 1.44
MDM1-210ENST00000540418 ABCC2Q92887 1545 aa24.03■■□□□ 1.44
MDM1-210ENST00000540418 ABCA8O94911 1581 aa24.02■■□□□ 1.44
MDM1-210ENST00000540418 CEP162Q5TB80 1403 aa24■■□□□ 1.43
MDM1-210ENST00000540418 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
MDM1-210ENST00000540418 KDM5BQ9UGL1 1544 aa23.95■■□□□ 1.42
MDM1-210ENST00000540418 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
MDM1-210ENST00000540418 MAPKBP1O60336 1514 aa23.89■■□□□ 1.42
MDM1-210ENST00000540418 ARID3CA6NKF2 412 aa23.87■■□□□ 1.41
MDM1-210ENST00000540418 NUP153P49790 1475 aaKnown RBP23.87■■□□□ 1.41
MDM1-210ENST00000540418 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
MDM1-210ENST00000540418 ATP10BO94823 1461 aa23.86■■□□□ 1.41
MDM1-210ENST00000540418 ZCCHC11Q5TAX3 1644 aaKnown RBP23.86■■□□□ 1.41
MDM1-210ENST00000540418 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
MDM1-210ENST00000540418 ASXL2Q76L83 1435 aa23.84■■□□□ 1.41
MDM1-210ENST00000540418 CASKIN1Q8WXD9 1431 aa23.81■■□□□ 1.4
MDM1-210ENST00000540418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
MDM1-210ENST00000540418 HNRNPUL2Q1KMD3 747 aaKnown RBP23.81■■□□□ 1.4
MDM1-210ENST00000540418 HECW1Q76N89 1606 aa23.78■■□□□ 1.4
MDM1-210ENST00000540418 ABCC10Q5T3U5 1492 aa23.77■■□□□ 1.4
MDM1-210ENST00000540418 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
MDM1-210ENST00000540418 PCF11O94913 1555 aaKnown RBP23.75■■□□□ 1.39
MDM1-210ENST00000540418 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
MDM1-210ENST00000540418 WDR7Q9Y4E6 1490 aa23.74■■□□□ 1.39
MDM1-210ENST00000540418 EPRSP07814 1512 aaKnown RBP23.74■■□□□ 1.39
MDM1-210ENST00000540418 PLEKHD1A6NEE1 506 aa23.72■■□□□ 1.39
MDM1-210ENST00000540418 CDK13Q14004 1512 aaKnown RBP23.71■■□□□ 1.39
MDM1-210ENST00000540418 KCNH8Q96L42 1107 aa23.7■■□□□ 1.38
MDM1-210ENST00000540418 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
MDM1-210ENST00000540418 DIP2BQ9P265 1576 aa23.69■■□□□ 1.38
MDM1-210ENST00000540418 CDK11AQ9UQ88 783 aaPredicted RBP23.68■■□□□ 1.38
MDM1-210ENST00000540418 CCDC18Q5T9S5 1454 aa23.67■■□□□ 1.38
MDM1-210ENST00000540418 GLI2P10070 1586 aa23.64■■□□□ 1.38
MDM1-210ENST00000540418 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.38
MDM1-210ENST00000540418 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
MDM1-210ENST00000540418 TROQ12816 1431 aaPredicted RBP23.56■■□□□ 1.36
MDM1-210ENST00000540418 CD109Q6YHK3 1445 aa23.53■■□□□ 1.36
MDM1-210ENST00000540418 MAP3K4Q9Y6R4 1608 aa23.52■■□□□ 1.36
MDM1-210ENST00000540418 ABCA9Q8IUA7 1624 aa23.5■■□□□ 1.35
MDM1-210ENST00000540418 MAGI3Q5TCQ9 1506 aa23.5■■□□□ 1.35
MDM1-210ENST00000540418 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
MDM1-210ENST00000540418 MTUS2Q5JR59 1369 aa23.48■■□□□ 1.35
MDM1-210ENST00000540418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.47■■□□□ 1.35
MDM1-210ENST00000540418 APLP2Q06481 763 aa23.47■■□□□ 1.35
MDM1-210ENST00000540418 MAP3K1Q13233 1512 aa23.46■■□□□ 1.35
MDM1-210ENST00000540418 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
MDM1-210ENST00000540418 TSPOAP1O95153 1857 aa23.45■■□□□ 1.34
MDM1-210ENST00000540418 KIF14Q15058 1648 aa23.44■■□□□ 1.34
MDM1-210ENST00000540418 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
MDM1-210ENST00000540418 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
MDM1-210ENST00000540418 TTC37Q6PGP7 1564 aa23.41■■□□□ 1.34
MDM1-210ENST00000540418 EHBP1L1Q8N3D4 1523 aa23.39■■□□□ 1.34
MDM1-210ENST00000540418 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.33
MDM1-210ENST00000540418 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
MDM1-210ENST00000540418 PLCH2O75038 1416 aa23.38■■□□□ 1.33
MDM1-210ENST00000540418 PHLDB1Q86UU1 1377 aa23.33■■□□□ 1.33
MDM1-210ENST00000540418 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
MDM1-210ENST00000540418 NEO1Q92859 1461 aa23.31■■□□□ 1.32
MDM1-210ENST00000540418 FANCAO15360 1455 aa23.3■■□□□ 1.32
MDM1-210ENST00000540418 ARAP3Q8WWN8 1544 aa23.3■■□□□ 1.32
MDM1-210ENST00000540418 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
MDM1-210ENST00000540418 MYO5CQ9NQX4 1742 aa23.29■■□□□ 1.32
MDM1-210ENST00000540418 GPATCH8Q9UKJ3 1502 aaKnown RBP23.28■■□□□ 1.32
MDM1-210ENST00000540418 NCOA2Q15596 1464 aa23.28■■□□□ 1.32
MDM1-210ENST00000540418 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
MDM1-210ENST00000540418 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms