RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 PRXQ9BXM0 1461 aa36.89■■■■□ 3.5
TRIM65-202ENST00000540128 KIAA0586Q9BVV6 1533 aa36.85■■■■□ 3.49
TRIM65-202ENST00000540128 JPH4Q96JJ6 628 aa36.81■■■■□ 3.48
TRIM65-202ENST00000540128 SHROOM2Q13796 1616 aa36.79■■■■□ 3.48
TRIM65-202ENST00000540128 FAM9AQ8IZU1 332 aaPredicted RBP36.74■■■■□ 3.47
TRIM65-202ENST00000540128 ARAP1Q96P48 1450 aa36.69■■■■□ 3.46
TRIM65-202ENST00000540128 PRG4Q92954 1404 aaPredicted RBP36.66■■■■□ 3.46
TRIM65-202ENST00000540128 CYB5RLQ6IPT4 315 aa36.65■■■■□ 3.46
TRIM65-202ENST00000540128 ERCC6L2Q5T890 1561 aa36.62■■■■□ 3.45
TRIM65-202ENST00000540128 IQGAP2Q13576 1575 aa36.58■■■■□ 3.45
TRIM65-202ENST00000540128 KIF21BO75037 1637 aa36.5■■■■□ 3.43
TRIM65-202ENST00000540128 UGGT2Q9NYU1 1516 aa36.46■■■■□ 3.43
TRIM65-202ENST00000540128 CTTNBP2Q8WZ74 1663 aa36.45■■■■□ 3.42
TRIM65-202ENST00000540128 CARMIL2Q6F5E8 1435 aa36.42■■■■□ 3.42
TRIM65-202ENST00000540128 DISP1Q96F81 1524 aa36.38■■■■□ 3.41
TRIM65-202ENST00000540128 GOLGA3Q08378 1498 aa36.31■■■■□ 3.4
TRIM65-202ENST00000540128 TNIKQ9UKE5 1360 aa36.31■■■■□ 3.4
TRIM65-202ENST00000540128 PTPRGP23470 1445 aa36.28■■■■□ 3.4
TRIM65-202ENST00000540128 UBTFP17480 764 aaKnown RBP36.23■■■■□ 3.39
TRIM65-202ENST00000540128 KIAA0556O60303 1618 aa36.23■■■■□ 3.39
TRIM65-202ENST00000540128 EHMT2Q96KQ7 1210 aa36.17■■■■□ 3.38
TRIM65-202ENST00000540128 TTBK1Q5TCY1 1321 aaPredicted RBP36.08■■■■□ 3.37
TRIM65-202ENST00000540128 SAMD9Q5K651 1589 aa36.08■■■■□ 3.37
TRIM65-202ENST00000540128 UACAQ9BZF9 1416 aa36.04■■■■□ 3.36
TRIM65-202ENST00000540128 ADCY10Q96PN6 1610 aa36.02■■■■□ 3.36
TRIM65-202ENST00000540128 P3H3Q8IVL6 736 aa36.02■■■■□ 3.36
TRIM65-202ENST00000540128 UHRF1BP1LA0JNW5 1464 aa36.02■■■■□ 3.36
TRIM65-202ENST00000540128 RANGAP1P46060 587 aaPredicted RBP36■■■■□ 3.35
TRIM65-202ENST00000540128 EFCAB5A4FU69 1503 aa35.97■■■■□ 3.35
TRIM65-202ENST00000540128 NPM1P06748 294 aaKnown RBP eCLIP35.96■■■■□ 3.35
TRIM65-202ENST00000540128 ABCC2Q92887 1545 aa35.92■■■■□ 3.34
TRIM65-202ENST00000540128 PLB1Q6P1J6 1458 aa35.89■■■■□ 3.34
TRIM65-202ENST00000540128 ABCA8O94911 1581 aa35.88■■■■□ 3.33
TRIM65-202ENST00000540128 FHOD3Q2V2M9 1422 aa35.87■■■■□ 3.33
TRIM65-202ENST00000540128 ARHGAP35Q9NRY4 1499 aa35.84■■■■□ 3.33
TRIM65-202ENST00000540128 KDM5BQ9UGL1 1544 aa35.83■■■■□ 3.33
TRIM65-202ENST00000540128 MAPKBP1O60336 1514 aa35.82■■■■□ 3.32
TRIM65-202ENST00000540128 TRHP20396 242 aaPredicted RBP35.78■■■■□ 3.32
TRIM65-202ENST00000540128 LOC105371045A0A1W2PR82 267 aa35.75■■■■□ 3.31
TRIM65-202ENST00000540128 CLIP1P30622 1438 aa35.68■■■■□ 3.3
TRIM65-202ENST00000540128 FMN1Q68DA7 1419 aa35.67■■■■□ 3.3
TRIM65-202ENST00000540128 RAPGEF6Q8TEU7 1601 aa35.66■■■■□ 3.3
TRIM65-202ENST00000540128 ASXL2Q76L83 1435 aa35.66■■■■□ 3.3
TRIM65-202ENST00000540128 ZCCHC11Q5TAX3 1644 aaKnown RBP35.65■■■■□ 3.3
TRIM65-202ENST00000540128 ABCC10Q5T3U5 1492 aa35.64■■■■□ 3.3
TRIM65-202ENST00000540128 ATP10BO94823 1461 aa35.62■■■■□ 3.29
TRIM65-202ENST00000540128 NUP153P49790 1475 aaKnown RBP35.6■■■■□ 3.29
TRIM65-202ENST00000540128 FAM69CQ0P6D2 419 aa35.56■■■■□ 3.28
TRIM65-202ENST00000540128 CEP162Q5TB80 1403 aa35.55■■■■□ 3.28
TRIM65-202ENST00000540128 ARID3CA6NKF2 412 aa35.52■■■■□ 3.28
TRIM65-202ENST00000540128 DIP2BQ9P265 1576 aa35.51■■■■□ 3.28
TRIM65-202ENST00000540128 KIF13AQ9H1H9 1805 aa35.5■■■■□ 3.27
TRIM65-202ENST00000540128 WDR7Q9Y4E6 1490 aa35.49■■■■□ 3.27
TRIM65-202ENST00000540128 EPRSP07814 1512 aaKnown RBP35.44■■■■□ 3.26
TRIM65-202ENST00000540128 GLI2P10070 1586 aa35.43■■■■□ 3.26
TRIM65-202ENST00000540128 CASKIN1Q8WXD9 1431 aa35.42■■■■□ 3.26
TRIM65-202ENST00000540128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.41■■■■□ 3.26
TRIM65-202ENST00000540128 HNRNPUL2Q1KMD3 747 aaKnown RBP35.41■■■■□ 3.26
TRIM65-202ENST00000540128 HECW1Q76N89 1606 aa35.39■■■■□ 3.26
TRIM65-202ENST00000540128 ATP1B4Q9UN42 357 aaPredicted RBP35.37■■■■□ 3.25
TRIM65-202ENST00000540128 PLEKHD1A6NEE1 506 aa35.35■■■■□ 3.25
TRIM65-202ENST00000540128 KCNH8Q96L42 1107 aa35.35■■■■□ 3.25
TRIM65-202ENST00000540128 CDK13Q14004 1512 aaKnown RBP35.31■■■■□ 3.24
TRIM65-202ENST00000540128 FYCO1Q9BQS8 1478 aa35.3■■■■□ 3.24
TRIM65-202ENST00000540128 PCF11O94913 1555 aaKnown RBP35.3■■■■□ 3.24
TRIM65-202ENST00000540128 CDK11AQ9UQ88 783 aaPredicted RBP35.25■■■■□ 3.23
TRIM65-202ENST00000540128 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
TRIM65-202ENST00000540128 MAP3K4Q9Y6R4 1608 aa35.21■■■■□ 3.23
TRIM65-202ENST00000540128 LRRIQ1Q96JM4 1722 aa35.18■■■■□ 3.22
TRIM65-202ENST00000540128 CD109Q6YHK3 1445 aa35.16■■■■□ 3.22
TRIM65-202ENST00000540128 VPS8Q8N3P4 1428 aa35.14■■■■□ 3.22
TRIM65-202ENST00000540128 CFAP43Q8NDM7 1665 aa35.13■■■■□ 3.21
TRIM65-202ENST00000540128 TSPOAP1O95153 1857 aa35.13■■■■□ 3.21
TRIM65-202ENST00000540128 ABCA9Q8IUA7 1624 aa35.12■■■■□ 3.21
TRIM65-202ENST00000540128 MAGI3Q5TCQ9 1506 aa35.11■■■■□ 3.21
TRIM65-202ENST00000540128 PPRC1Q5VV67 1664 aaKnown RBP35.11■■■■□ 3.21
TRIM65-202ENST00000540128 TROQ12816 1431 aaPredicted RBP35.11■■■■□ 3.21
TRIM65-202ENST00000540128 TEX14Q8IWB6 1497 aa35.07■■■■□ 3.2
TRIM65-202ENST00000540128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.02■■■■□ 3.23e-6■■■■■ 38.4
TRIM65-202ENST00000540128 TTC37Q6PGP7 1564 aa34.92■■■■□ 3.18
TRIM65-202ENST00000540128 PHLDB1Q86UU1 1377 aa34.92■■■■□ 3.18
TRIM65-202ENST00000540128 KIF14Q15058 1648 aa34.92■■■■□ 3.18
TRIM65-202ENST00000540128 PLCH2O75038 1416 aa34.89■■■■□ 3.18
TRIM65-202ENST00000540128 MTUS2Q5JR59 1369 aa34.87■■■■□ 3.17
TRIM65-202ENST00000540128 NEO1Q92859 1461 aa34.87■■■■□ 3.17
TRIM65-202ENST00000540128 COL17A1Q9UMD9 1497 aaPredicted RBP34.87■■■■□ 3.17
TRIM65-202ENST00000540128 MAP3K1Q13233 1512 aa34.86■■■■□ 3.17
TRIM65-202ENST00000540128 KDM6BO15054 1643 aa34.86■■■■□ 3.17
TRIM65-202ENST00000540128 TIAM1Q13009 1591 aa34.83■■■■□ 3.17
TRIM65-202ENST00000540128 ARAP3Q8WWN8 1544 aa34.81■■■■□ 3.16
TRIM65-202ENST00000540128 FANCAO15360 1455 aa34.78■■■■□ 3.16
TRIM65-202ENST00000540128 EHBP1L1Q8N3D4 1523 aa34.78■■■■□ 3.16
TRIM65-202ENST00000540128 EFCAB2Q5VUJ9 269 aa34.77■■■■□ 3.16
TRIM65-202ENST00000540128 AKNAQ7Z591 1439 aa34.75■■■■□ 3.15
TRIM65-202ENST00000540128 MYO5CQ9NQX4 1742 aa34.74■■■■□ 3.15
TRIM65-202ENST00000540128 LRRC9Q6ZRR7 1453 aa34.72■■■■□ 3.15
TRIM65-202ENST00000540128 APLP2Q06481 763 aa34.71■■■■□ 3.15
TRIM65-202ENST00000540128 KANK4Q5T7N3 995 aaPredicted RBP34.7■■■■□ 3.15
TRIM65-202ENST00000540128 CFAP74Q9C0B2 1584 aa34.7■■■■□ 3.14
TRIM65-202ENST00000540128 GPATCH8Q9UKJ3 1502 aaKnown RBP34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms