RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
PRKAB1-205ENST00000540121 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
PRKAB1-205ENST00000540121 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
PRKAB1-205ENST00000540121 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
PRKAB1-205ENST00000540121 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
PRKAB1-205ENST00000540121 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
PRKAB1-205ENST00000540121 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
PRKAB1-205ENST00000540121 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
PRKAB1-205ENST00000540121 CENPBP07199 599 aaPredicted RBP20.04■□□□□ 0.8
PRKAB1-205ENST00000540121 EFCAB5A4FU69 1503 aa20.03■□□□□ 0.8
PRKAB1-205ENST00000540121 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
PRKAB1-205ENST00000540121 CUL7Q14999 1698 aa20.03■□□□□ 0.8
PRKAB1-205ENST00000540121 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
PRKAB1-205ENST00000540121 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.84e-7■■■■□ 23.2
PRKAB1-205ENST00000540121 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
PRKAB1-205ENST00000540121 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
PRKAB1-205ENST00000540121 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
PRKAB1-205ENST00000540121 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
PRKAB1-205ENST00000540121 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
PRKAB1-205ENST00000540121 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
PRKAB1-205ENST00000540121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
PRKAB1-205ENST00000540121 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
PRKAB1-205ENST00000540121 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
PRKAB1-205ENST00000540121 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
PRKAB1-205ENST00000540121 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
PRKAB1-205ENST00000540121 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.78
PRKAB1-205ENST00000540121 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
PRKAB1-205ENST00000540121 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
PRKAB1-205ENST00000540121 FMN1Q68DA7 1419 aa19.88■□□□□ 0.77
PRKAB1-205ENST00000540121 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
PRKAB1-205ENST00000540121 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
PRKAB1-205ENST00000540121 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
PRKAB1-205ENST00000540121 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
PRKAB1-205ENST00000540121 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
PRKAB1-205ENST00000540121 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
PRKAB1-205ENST00000540121 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
PRKAB1-205ENST00000540121 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
PRKAB1-205ENST00000540121 CHD1O14646 1710 aa19.8■□□□□ 0.76
PRKAB1-205ENST00000540121 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
PRKAB1-205ENST00000540121 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
PRKAB1-205ENST00000540121 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.75
PRKAB1-205ENST00000540121 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
PRKAB1-205ENST00000540121 PHLDB1Q86UU1 1377 aa19.75■□□□□ 0.75
PRKAB1-205ENST00000540121 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
PRKAB1-205ENST00000540121 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
PRKAB1-205ENST00000540121 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
PRKAB1-205ENST00000540121 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
PRKAB1-205ENST00000540121 MIER1Q8N108 512 aa19.67■□□□□ 0.74
PRKAB1-205ENST00000540121 FBLN2P98095 1184 aa19.65■□□□□ 0.74
PRKAB1-205ENST00000540121 MAPKBP1O60336 1514 aa19.65■□□□□ 0.74
PRKAB1-205ENST00000540121 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
PRKAB1-205ENST00000540121 FGD6Q6ZV73 1430 aa19.62■□□□□ 0.73
PRKAB1-205ENST00000540121 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
PRKAB1-205ENST00000540121 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
PRKAB1-205ENST00000540121 FOXD1Q16676 465 aa19.62■□□□□ 0.73
PRKAB1-205ENST00000540121 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
PRKAB1-205ENST00000540121 GTF3C3Q9Y5Q9 886 aa19.59■□□□□ 0.73
PRKAB1-205ENST00000540121 MTUS2Q5JR59 1369 aa19.58■□□□□ 0.72
PRKAB1-205ENST00000540121 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
PRKAB1-205ENST00000540121 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
PRKAB1-205ENST00000540121 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
PRKAB1-205ENST00000540121 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
PRKAB1-205ENST00000540121 MYOM3Q5VTT5 1437 aa19.55■□□□□ 0.72
PRKAB1-205ENST00000540121 ITGAEP38570 1179 aa19.53■□□□□ 0.72
PRKAB1-205ENST00000540121 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.71
PRKAB1-205ENST00000540121 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
PRKAB1-205ENST00000540121 AKNAQ7Z591 1439 aa19.5■□□□□ 0.71
PRKAB1-205ENST00000540121 NCOA2Q15596 1464 aa19.5■□□□□ 0.71
PRKAB1-205ENST00000540121 ATP1B4Q9UN42 357 aaPredicted RBP19.49■□□□□ 0.71
PRKAB1-205ENST00000540121 UACAQ9BZF9 1416 aa19.49■□□□□ 0.71
PRKAB1-205ENST00000540121 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
PRKAB1-205ENST00000540121 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
PRKAB1-205ENST00000540121 ADAMTS12P58397 1594 aa19.48■□□□□ 0.71
PRKAB1-205ENST00000540121 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
PRKAB1-205ENST00000540121 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
PRKAB1-205ENST00000540121 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
PRKAB1-205ENST00000540121 HECW1Q76N89 1606 aa19.47■□□□□ 0.71
PRKAB1-205ENST00000540121 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
PRKAB1-205ENST00000540121 SYNJ2O15056 1496 aa19.44■□□□□ 0.7
PRKAB1-205ENST00000540121 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
PRKAB1-205ENST00000540121 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
PRKAB1-205ENST00000540121 KIAA0586Q9BVV6 1533 aa19.4■□□□□ 0.7
PRKAB1-205ENST00000540121 NAIPQ13075 1403 aa19.4■□□□□ 0.7
PRKAB1-205ENST00000540121 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.7
PRKAB1-205ENST00000540121 EPRSP07814 1512 aaKnown RBP19.39■□□□□ 0.69
PRKAB1-205ENST00000540121 PTPRKQ15262 1439 aa19.36■□□□□ 0.69
PRKAB1-205ENST00000540121 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.69
PRKAB1-205ENST00000540121 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
PRKAB1-205ENST00000540121 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
PRKAB1-205ENST00000540121 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
PRKAB1-205ENST00000540121 MAGI3Q5TCQ9 1506 aa19.3■□□□□ 0.68
PRKAB1-205ENST00000540121 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
PRKAB1-205ENST00000540121 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
PRKAB1-205ENST00000540121 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
PRKAB1-205ENST00000540121 ADRA2BP18089 450 aa19.27■□□□□ 0.68
PRKAB1-205ENST00000540121 CCER2I3L3R5 266 aa19.27■□□□□ 0.67
PRKAB1-205ENST00000540121 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
PRKAB1-205ENST00000540121 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
PRKAB1-205ENST00000540121 DISP1Q96F81 1524 aa19.24■□□□□ 0.67
PRKAB1-205ENST00000540121 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms