RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 ADAMTS12P58397 1594 aa10.96□□□□□ -0.66
CDH19-203ENST00000540086 MAGI1Q96QZ7 1491 aaPredicted RBP10.93□□□□□ -0.66
CDH19-203ENST00000540086 FBLN2P98095 1184 aa10.92□□□□□ -0.66
CDH19-203ENST00000540086 CHMP7Q8WUX9 453 aaPredicted RBP10.91□□□□□ -0.66
CDH19-203ENST00000540086 SYNJ2O15056 1496 aa10.9□□□□□ -0.66
CDH19-203ENST00000540086 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
CDH19-203ENST00000540086 ARHGAP35Q9NRY4 1499 aa10.88□□□□□ -0.67
CDH19-203ENST00000540086 ARAP1Q96P48 1450 aa10.88□□□□□ -0.67
CDH19-203ENST00000540086 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
CDH19-203ENST00000540086 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
CDH19-203ENST00000540086 PPARGC1BQ86YN6 1023 aaKnown RBP10.84□□□□□ -0.67
CDH19-203ENST00000540086 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
CDH19-203ENST00000540086 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
CDH19-203ENST00000540086 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
CDH19-203ENST00000540086 NUP160Q12769 1436 aa10.81□□□□□ -0.68
CDH19-203ENST00000540086 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
CDH19-203ENST00000540086 CEP170Q5SW79 1584 aa10.81□□□□□ -0.68
CDH19-203ENST00000540086 EFCAB5A4FU69 1503 aa10.81□□□□□ -0.68
CDH19-203ENST00000540086 MSH5O43196 834 aa10.79□□□□□ -0.68
CDH19-203ENST00000540086 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
CDH19-203ENST00000540086 SAMD9Q5K651 1589 aa10.77□□□□□ -0.69
CDH19-203ENST00000540086 UGGT2Q9NYU1 1516 aa10.77□□□□□ -0.69
CDH19-203ENST00000540086 APLP2Q06481 763 aa10.76□□□□□ -0.69
CDH19-203ENST00000540086 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
CDH19-203ENST00000540086 CHD1O14646 1710 aa10.74□□□□□ -0.69
CDH19-203ENST00000540086 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
CDH19-203ENST00000540086 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
CDH19-203ENST00000540086 FMN1Q68DA7 1419 aa10.73□□□□□ -0.69
CDH19-203ENST00000540086 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
CDH19-203ENST00000540086 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
CDH19-203ENST00000540086 PCF11O94913 1555 aaKnown RBP10.71□□□□□ -0.7
CDH19-203ENST00000540086 KIAA0556O60303 1618 aa10.71□□□□□ -0.7
CDH19-203ENST00000540086 CASKIN1Q8WXD9 1431 aa10.7□□□□□ -0.7
CDH19-203ENST00000540086 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
CDH19-203ENST00000540086 KANK4Q5T7N3 995 aaPredicted RBP10.7□□□□□ -0.7
CDH19-203ENST00000540086 PRG4Q92954 1404 aaPredicted RBP10.69□□□□□ -0.7
CDH19-203ENST00000540086 FYCO1Q9BQS8 1478 aa10.69□□□□□ -0.7
CDH19-203ENST00000540086 CLASP1Q7Z460 1538 aa10.66□□□□□ -0.7
CDH19-203ENST00000540086 ARID3CA6NKF2 412 aa10.65□□□□□ -0.71
CDH19-203ENST00000540086 TIAM1Q13009 1591 aa10.65□□□□□ -0.71
CDH19-203ENST00000540086 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
CDH19-203ENST00000540086 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
CDH19-203ENST00000540086 SHROOM2Q13796 1616 aa10.63□□□□□ -0.71
CDH19-203ENST00000540086 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
CDH19-203ENST00000540086 PLB1Q6P1J6 1458 aa10.62□□□□□ -0.71
CDH19-203ENST00000540086 LRRC9Q6ZRR7 1453 aa10.62□□□□□ -0.71
CDH19-203ENST00000540086 ERCC6L2Q5T890 1561 aa10.62□□□□□ -0.71
CDH19-203ENST00000540086 PTPRGP23470 1445 aa10.62□□□□□ -0.71
CDH19-203ENST00000540086 HECW1Q76N89 1606 aa10.61□□□□□ -0.71
CDH19-203ENST00000540086 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
CDH19-203ENST00000540086 EPRSP07814 1512 aaKnown RBP10.6□□□□□ -0.71
CDH19-203ENST00000540086 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
CDH19-203ENST00000540086 CDK13Q14004 1512 aaKnown RBP10.59□□□□□ -0.71
CDH19-203ENST00000540086 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
CDH19-203ENST00000540086 MTUS2Q5JR59 1369 aa10.58□□□□□ -0.72
CDH19-203ENST00000540086 RAPGEF6Q8TEU7 1601 aa10.58□□□□□ -0.72
CDH19-203ENST00000540086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.57□□□□□ -0.72
CDH19-203ENST00000540086 HNRNPUL2Q1KMD3 747 aaKnown RBP10.57□□□□□ -0.72
CDH19-203ENST00000540086 ABCA8O94911 1581 aa10.56□□□□□ -0.72
CDH19-203ENST00000540086 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
CDH19-203ENST00000540086 PHLDB1Q86UU1 1377 aa10.55□□□□□ -0.72
CDH19-203ENST00000540086 MAGI3Q5TCQ9 1506 aa10.55□□□□□ -0.72
CDH19-203ENST00000540086 UACAQ9BZF9 1416 aa10.54□□□□□ -0.72
CDH19-203ENST00000540086 EHBP1L1Q8N3D4 1523 aa10.52□□□□□ -0.72
CDH19-203ENST00000540086 CDK11AQ9UQ88 783 aaPredicted RBP10.52□□□□□ -0.73
CDH19-203ENST00000540086 ATP10BO94823 1461 aa10.51□□□□□ -0.73
CDH19-203ENST00000540086 NCOA2Q15596 1464 aa10.51□□□□□ -0.73
CDH19-203ENST00000540086 RRBP1Q9P2E9 1410 aaKnown RBP10.51□□□□□ -0.73
CDH19-203ENST00000540086 CCNB3Q8WWL7 1395 aa10.5□□□□□ -0.73
CDH19-203ENST00000540086 ABCC2Q92887 1545 aa10.49□□□□□ -0.73
CDH19-203ENST00000540086 TROQ12816 1431 aaPredicted RBP10.48□□□□□ -0.73
CDH19-203ENST00000540086 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
CDH19-203ENST00000540086 FAM50AQ14320 339 aaKnown RBP10.47□□□□□ -0.73
CDH19-203ENST00000540086 UHRF1BP1LA0JNW5 1464 aa10.47□□□□□ -0.73
CDH19-203ENST00000540086 ARHGEF11O15085 1522 aa10.47□□□□□ -0.73
CDH19-203ENST00000540086 SUPT6HQ7KZ85 1726 aaKnown RBP10.46□□□□□ -0.73
CDH19-203ENST00000540086 MYOM3Q5VTT5 1437 aa10.46□□□□□ -0.73
CDH19-203ENST00000540086 FGD6Q6ZV73 1430 aa10.46□□□□□ -0.73
CDH19-203ENST00000540086 ITGAEP38570 1179 aa10.46□□□□□ -0.74
CDH19-203ENST00000540086 KDM5BQ9UGL1 1544 aa10.43□□□□□ -0.74
CDH19-203ENST00000540086 ADCY10Q96PN6 1610 aa10.42□□□□□ -0.74
CDH19-203ENST00000540086 KIF14Q15058 1648 aa10.41□□□□□ -0.74
CDH19-203ENST00000540086 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
CDH19-203ENST00000540086 ZCCHC11Q5TAX3 1644 aaKnown RBP10.4□□□□□ -0.74
CDH19-203ENST00000540086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDH19-203ENST00000540086 MIA2Q96PC5 1412 aa10.39□□□□□ -0.75
CDH19-203ENST00000540086 ABCC10Q5T3U5 1492 aa10.39□□□□□ -0.75
CDH19-203ENST00000540086 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
CDH19-203ENST00000540086 GPATCH8Q9UKJ3 1502 aaKnown RBP10.38□□□□□ -0.75
CDH19-203ENST00000540086 CFDP1Q9UEE9 299 aaPredicted RBP10.38□□□□□ -0.75
CDH19-203ENST00000540086 ZNF644Q9H582 1327 aaPredicted RBP10.38□□□□□ -0.75
CDH19-203ENST00000540086 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDH19-203ENST00000540086 TCOF1Q13428 1488 aaKnown RBP10.37□□□□□ -0.75
CDH19-203ENST00000540086 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
CDH19-203ENST00000540086 ZNF777Q9ULD5 760 aaPredicted RBP10.37□□□□□ -0.75
CDH19-203ENST00000540086 RIMBP3CA6NJZ7 1639 aa10.36□□□□□ -0.75
CDH19-203ENST00000540086 RIMBP3BA6NNM3 1639 aa10.36□□□□□ -0.75
CDH19-203ENST00000540086 RIMBP3Q9UFD9 1639 aa10.36□□□□□ -0.75
CDH19-203ENST00000540086 WDR7Q9Y4E6 1490 aa10.35□□□□□ -0.75
CDH19-203ENST00000540086 PTPRKQ15262 1439 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms