RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 FKBP8Q14318 412 aa11.11□□□□□ -0.63
SNHG1-212ENST00000539975 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
SNHG1-212ENST00000539975 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
SNHG1-212ENST00000539975 PROM2Q8N271 834 aa11.07□□□□□ -0.64
SNHG1-212ENST00000539975 CUX2O14529 1486 aa11.06□□□□□ -0.64
SNHG1-212ENST00000539975 KIF21AQ7Z4S6 1674 aa11.05□□□□□ -0.64
SNHG1-212ENST00000539975 ABCC8Q09428 1581 aa11.05□□□□□ -0.64
SNHG1-212ENST00000539975 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
SNHG1-212ENST00000539975 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
SNHG1-212ENST00000539975 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
SNHG1-212ENST00000539975 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
SNHG1-212ENST00000539975 WDR62O43379 1518 aa10.99□□□□□ -0.65
SNHG1-212ENST00000539975 THOC2Q8NI27 1593 aaKnown RBP10.99□□□□□ -0.65
SNHG1-212ENST00000539975 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
SNHG1-212ENST00000539975 URB2Q14146 1524 aaKnown RBP10.98□□□□□ -0.65
SNHG1-212ENST00000539975 DNMBPQ6XZF7 1577 aa10.95□□□□□ -0.66
SNHG1-212ENST00000539975 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
SNHG1-212ENST00000539975 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SNHG1-212ENST00000539975 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
SNHG1-212ENST00000539975 IFT140Q96RY7 1462 aa10.91□□□□□ -0.66
SNHG1-212ENST00000539975 SOGA1O94964 1423 aa10.91□□□□□ -0.66
SNHG1-212ENST00000539975 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNHG1-212ENST00000539975 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
SNHG1-212ENST00000539975 CUX1P39880 1505 aa10.89□□□□□ -0.67
SNHG1-212ENST00000539975 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
SNHG1-212ENST00000539975 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
SNHG1-212ENST00000539975 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
SNHG1-212ENST00000539975 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
SNHG1-212ENST00000539975 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
SNHG1-212ENST00000539975 RAD54L2Q9Y4B4 1467 aa10.83□□□□□ -0.68
SNHG1-212ENST00000539975 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
SNHG1-212ENST00000539975 POTEHQ6S545 545 aa10.82□□□□□ -0.68
SNHG1-212ENST00000539975 SYNJ1O43426 1573 aa10.81□□□□□ -0.68
SNHG1-212ENST00000539975 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
SNHG1-212ENST00000539975 AQRO60306 1485 aaKnown RBP eCLIP10.79□□□□□ -0.683e-14■■■■■ 45.6
SNHG1-212ENST00000539975 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
SNHG1-212ENST00000539975 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
SNHG1-212ENST00000539975 ABCA10Q8WWZ4 1543 aa10.77□□□□□ -0.69
SNHG1-212ENST00000539975 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
SNHG1-212ENST00000539975 GAPVD1Q14C86 1478 aa10.76□□□□□ -0.69
SNHG1-212ENST00000539975 CHMP7Q8WUX9 453 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-212ENST00000539975 KIF27Q86VH2 1401 aa10.75□□□□□ -0.69
SNHG1-212ENST00000539975 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
SNHG1-212ENST00000539975 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
SNHG1-212ENST00000539975 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
SNHG1-212ENST00000539975 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
SNHG1-212ENST00000539975 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
SNHG1-212ENST00000539975 MAGI1Q96QZ7 1491 aaPredicted RBP10.69□□□□□ -0.7
SNHG1-212ENST00000539975 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
SNHG1-212ENST00000539975 MIER1Q8N108 512 aa10.69□□□□□ -0.7
SNHG1-212ENST00000539975 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
SNHG1-212ENST00000539975 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-212ENST00000539975 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
SNHG1-212ENST00000539975 PLCD3Q8N3E9 789 aa10.65□□□□□ -0.7
SNHG1-212ENST00000539975 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
SNHG1-212ENST00000539975 FHAD1B1AJZ9 1412 aa10.65□□□□□ -0.7
SNHG1-212ENST00000539975 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
SNHG1-212ENST00000539975 IGF1RP08069 1367 aa10.65□□□□□ -0.71
SNHG1-212ENST00000539975 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
SNHG1-212ENST00000539975 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
SNHG1-212ENST00000539975 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
SNHG1-212ENST00000539975 EEA1Q15075 1411 aa10.63□□□□□ -0.71
SNHG1-212ENST00000539975 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
SNHG1-212ENST00000539975 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNHG1-212ENST00000539975 DNAJC5Q9H3Z4 198 aa10.62□□□□□ -0.71
SNHG1-212ENST00000539975 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
SNHG1-212ENST00000539975 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-212ENST00000539975 GRIN2AQ12879 1464 aa10.57□□□□□ -0.72
SNHG1-212ENST00000539975 CUL7Q14999 1698 aa10.57□□□□□ -0.72
SNHG1-212ENST00000539975 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
SNHG1-212ENST00000539975 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
SNHG1-212ENST00000539975 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
SNHG1-212ENST00000539975 HAX1O00165 279 aa10.55□□□□□ -0.72
SNHG1-212ENST00000539975 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
SNHG1-212ENST00000539975 CHD1O14646 1710 aa10.53□□□□□ -0.72
SNHG1-212ENST00000539975 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
SNHG1-212ENST00000539975 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
SNHG1-212ENST00000539975 NUP160Q12769 1436 aa10.5□□□□□ -0.73
SNHG1-212ENST00000539975 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
SNHG1-212ENST00000539975 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
SNHG1-212ENST00000539975 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
SNHG1-212ENST00000539975 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
SNHG1-212ENST00000539975 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
SNHG1-212ENST00000539975 CEP170Q5SW79 1584 aa10.45□□□□□ -0.74
SNHG1-212ENST00000539975 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
SNHG1-212ENST00000539975 CYB5RLQ6IPT4 315 aa10.45□□□□□ -0.74
SNHG1-212ENST00000539975 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
SNHG1-212ENST00000539975 CLASP1Q7Z460 1538 aa10.44□□□□□ -0.74
SNHG1-212ENST00000539975 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
SNHG1-212ENST00000539975 PRG4Q92954 1404 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-212ENST00000539975 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
SNHG1-212ENST00000539975 TTBK1Q5TCY1 1321 aaPredicted RBP10.42□□□□□ -0.74
SNHG1-212ENST00000539975 NUBP1P53384 320 aa10.42□□□□□ -0.74
SNHG1-212ENST00000539975 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
SNHG1-212ENST00000539975 ARHGEF11O15085 1522 aa10.42□□□□□ -0.74
SNHG1-212ENST00000539975 IQGAP2Q13576 1575 aa10.4□□□□□ -0.74
SNHG1-212ENST00000539975 KIF21BO75037 1637 aa10.4□□□□□ -0.75
SNHG1-212ENST00000539975 CLCN6P51797 869 aa10.39□□□□□ -0.75
SNHG1-212ENST00000539975 ZRANB1Q9UGI0 708 aa10.39□□□□□ -0.75
SNHG1-212ENST00000539975 EVX2Q03828 476 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms