RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CHD1O14646 1710 aa25.85■■□□□ 1.73
TRAF3-204ENST00000539721 CLIP1P30622 1438 aa25.82■■□□□ 1.72
TRAF3-204ENST00000539721 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
TRAF3-204ENST00000539721 CEP170Q5SW79 1584 aa25.77■■□□□ 1.72
TRAF3-204ENST00000539721 IQGAP2Q13576 1575 aa25.75■■□□□ 1.71
TRAF3-204ENST00000539721 NUP160Q12769 1436 aa25.73■■□□□ 1.71
TRAF3-204ENST00000539721 KIAA0586Q9BVV6 1533 aa25.72■■□□□ 1.71
TRAF3-204ENST00000539721 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
TRAF3-204ENST00000539721 EFCAB5A4FU69 1503 aa25.66■■□□□ 1.7
TRAF3-204ENST00000539721 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
TRAF3-204ENST00000539721 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
TRAF3-204ENST00000539721 UGGT2Q9NYU1 1516 aa25.6■■□□□ 1.69
TRAF3-204ENST00000539721 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
TRAF3-204ENST00000539721 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
TRAF3-204ENST00000539721 FHOD3Q2V2M9 1422 aa25.52■■□□□ 1.68
TRAF3-204ENST00000539721 CLASP1Q7Z460 1538 aa25.51■■□□□ 1.67
TRAF3-204ENST00000539721 KIAA0556O60303 1618 aa25.5■■□□□ 1.67
TRAF3-204ENST00000539721 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
TRAF3-204ENST00000539721 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
TRAF3-204ENST00000539721 SHROOM2Q13796 1616 aa25.46■■□□□ 1.67
TRAF3-204ENST00000539721 CARMIL2Q6F5E8 1435 aa25.43■■□□□ 1.66
TRAF3-204ENST00000539721 OSCARQ8IYS5 282 aa25.4■■□□□ 1.66
TRAF3-204ENST00000539721 FMN1Q68DA7 1419 aa25.39■■□□□ 1.66
TRAF3-204ENST00000539721 PRG4Q92954 1404 aaPredicted RBP25.39■■□□□ 1.66
TRAF3-204ENST00000539721 PCF11O94913 1555 aaKnown RBP25.36■■□□□ 1.65
TRAF3-204ENST00000539721 CASKIN1Q8WXD9 1431 aa25.3■■□□□ 1.64
TRAF3-204ENST00000539721 FYCO1Q9BQS8 1478 aa25.3■■□□□ 1.64
TRAF3-204ENST00000539721 TTBK1Q5TCY1 1321 aaPredicted RBP25.28■■□□□ 1.64
TRAF3-204ENST00000539721 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
TRAF3-204ENST00000539721 APLP2Q06481 763 aa25.28■■□□□ 1.64
TRAF3-204ENST00000539721 ATP1B4Q9UN42 357 aaPredicted RBP25.24■■□□□ 1.63
TRAF3-204ENST00000539721 HECW1Q76N89 1606 aa25.22■■□□□ 1.63
TRAF3-204ENST00000539721 RAPGEF6Q8TEU7 1601 aa25.21■■□□□ 1.63
TRAF3-204ENST00000539721 PPARGC1BQ86YN6 1023 aaKnown RBP25.2■■□□□ 1.62
TRAF3-204ENST00000539721 PTPRGP23470 1445 aa25.19■■□□□ 1.62
TRAF3-204ENST00000539721 CFAP43Q8NDM7 1665 aa25.18■■□□□ 1.62
TRAF3-204ENST00000539721 LRRIQ1Q96JM4 1722 aa25.18■■□□□ 1.62
TRAF3-204ENST00000539721 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
TRAF3-204ENST00000539721 MAP3K1Q13233 1512 aa25.16■■□□□ 1.62
TRAF3-204ENST00000539721 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
TRAF3-204ENST00000539721 ABCA8O94911 1581 aa25.13■■□□□ 1.61
TRAF3-204ENST00000539721 CCDC18Q5T9S5 1454 aa25.11■■□□□ 1.61
TRAF3-204ENST00000539721 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
TRAF3-204ENST00000539721 EPRSP07814 1512 aaKnown RBP25.09■■□□□ 1.61
TRAF3-204ENST00000539721 KANK4Q5T7N3 995 aaPredicted RBP25.05■■□□□ 1.6
TRAF3-204ENST00000539721 UACAQ9BZF9 1416 aa25.05■■□□□ 1.6
TRAF3-204ENST00000539721 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
TRAF3-204ENST00000539721 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
TRAF3-204ENST00000539721 ARID3CA6NKF2 412 aa25.03■■□□□ 1.6
TRAF3-204ENST00000539721 ARHGEF11O15085 1522 aa25.01■■□□□ 1.59
TRAF3-204ENST00000539721 ABCC2Q92887 1545 aa25■■□□□ 1.59
TRAF3-204ENST00000539721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
TRAF3-204ENST00000539721 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
TRAF3-204ENST00000539721 MTUS2Q5JR59 1369 aa24.95■■□□□ 1.58
TRAF3-204ENST00000539721 UHRF1BP1LA0JNW5 1464 aa24.95■■□□□ 1.58
TRAF3-204ENST00000539721 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
TRAF3-204ENST00000539721 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
TRAF3-204ENST00000539721 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
TRAF3-204ENST00000539721 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
TRAF3-204ENST00000539721 ATP10BO94823 1461 aa24.93■■□□□ 1.58
TRAF3-204ENST00000539721 MAGI3Q5TCQ9 1506 aa24.93■■□□□ 1.58
TRAF3-204ENST00000539721 ADCY10Q96PN6 1610 aa24.91■■□□□ 1.58
TRAF3-204ENST00000539721 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
TRAF3-204ENST00000539721 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.57
TRAF3-204ENST00000539721 SUPT6HQ7KZ85 1726 aaKnown RBP24.88■■□□□ 1.57
TRAF3-204ENST00000539721 ZCCHC11Q5TAX3 1644 aaKnown RBP24.86■■□□□ 1.57
TRAF3-204ENST00000539721 KDM5BQ9UGL1 1544 aa24.84■■□□□ 1.57
TRAF3-204ENST00000539721 TROQ12816 1431 aaPredicted RBP24.82■■□□□ 1.56
TRAF3-204ENST00000539721 PLEKHD1A6NEE1 506 aa24.8■■□□□ 1.56
TRAF3-204ENST00000539721 NCOA2Q15596 1464 aa24.8■■□□□ 1.56
TRAF3-204ENST00000539721 PCGF6Q9BYE7 350 aa24.77■■□□□ 1.56
TRAF3-204ENST00000539721 PHLDB1Q86UU1 1377 aa24.76■■□□□ 1.55
TRAF3-204ENST00000539721 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
TRAF3-204ENST00000539721 KIF14Q15058 1648 aa24.74■■□□□ 1.55
TRAF3-204ENST00000539721 NPM1P06748 294 aaKnown RBP eCLIP24.7■■□□□ 1.54
TRAF3-204ENST00000539721 RRBP1Q9P2E9 1410 aaKnown RBP24.69■■□□□ 1.54
TRAF3-204ENST00000539721 MYOM3Q5VTT5 1437 aa24.67■■□□□ 1.54
TRAF3-204ENST00000539721 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
TRAF3-204ENST00000539721 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
TRAF3-204ENST00000539721 WDR7Q9Y4E6 1490 aa24.63■■□□□ 1.53
TRAF3-204ENST00000539721 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
TRAF3-204ENST00000539721 ABCC10Q5T3U5 1492 aa24.62■■□□□ 1.53
TRAF3-204ENST00000539721 ASXL2Q76L83 1435 aa24.62■■□□□ 1.53
TRAF3-204ENST00000539721 KCNH8Q96L42 1107 aa24.59■■□□□ 1.53
TRAF3-204ENST00000539721 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
TRAF3-204ENST00000539721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.57■■□□□ 1.523e-14■■■■■ 27.4
TRAF3-204ENST00000539721 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
TRAF3-204ENST00000539721 TTC37Q6PGP7 1564 aa24.57■■□□□ 1.52
TRAF3-204ENST00000539721 MIA2Q96PC5 1412 aa24.56■■□□□ 1.52
TRAF3-204ENST00000539721 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
TRAF3-204ENST00000539721 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
TRAF3-204ENST00000539721 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
TRAF3-204ENST00000539721 MYO5CQ9NQX4 1742 aa24.52■■□□□ 1.52
TRAF3-204ENST00000539721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRAF3-204ENST00000539721 PREX2Q70Z35 1606 aa24.52■■□□□ 1.52
TRAF3-204ENST00000539721 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
TRAF3-204ENST00000539721 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
TRAF3-204ENST00000539721 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
TRAF3-204ENST00000539721 ABCA9Q8IUA7 1624 aa24.48■■□□□ 1.51
TRAF3-204ENST00000539721 ITGAEP38570 1179 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms