RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 RAPGEF2Q9Y4G8 1499 aa29■■■□□ 2.23
SLC3A2-213ENST00000539458 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
SLC3A2-213ENST00000539458 PRXQ9BXM0 1461 aa28.96■■■□□ 2.23
SLC3A2-213ENST00000539458 CSRNP3Q8WYN3 585 aa28.95■■■□□ 2.22
SLC3A2-213ENST00000539458 FAM9AQ8IZU1 332 aaPredicted RBP28.87■■■□□ 2.21
SLC3A2-213ENST00000539458 KIAA0586Q9BVV6 1533 aa28.87■■■□□ 2.21
SLC3A2-213ENST00000539458 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
SLC3A2-213ENST00000539458 KIF21BO75037 1637 aa28.78■■■□□ 2.2
SLC3A2-213ENST00000539458 IQGAP2Q13576 1575 aa28.76■■■□□ 2.19
SLC3A2-213ENST00000539458 CTTNBP2Q8WZ74 1663 aa28.75■■■□□ 2.19
SLC3A2-213ENST00000539458 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
SLC3A2-213ENST00000539458 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
SLC3A2-213ENST00000539458 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
SLC3A2-213ENST00000539458 UGGT2Q9NYU1 1516 aa28.61■■■□□ 2.17
SLC3A2-213ENST00000539458 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
SLC3A2-213ENST00000539458 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
SLC3A2-213ENST00000539458 DISP1Q96F81 1524 aa28.53■■■□□ 2.16
SLC3A2-213ENST00000539458 KIAA0556O60303 1618 aa28.49■■■□□ 2.15
SLC3A2-213ENST00000539458 EHMT2Q96KQ7 1210 aa28.45■■■□□ 2.14
SLC3A2-213ENST00000539458 TNIKQ9UKE5 1360 aa28.43■■■□□ 2.14
SLC3A2-213ENST00000539458 UBTFP17480 764 aaKnown RBP28.43■■■□□ 2.14
SLC3A2-213ENST00000539458 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
SLC3A2-213ENST00000539458 SAMD9Q5K651 1589 aa28.39■■■□□ 2.14
SLC3A2-213ENST00000539458 PTPRGP23470 1445 aa28.38■■■□□ 2.13
SLC3A2-213ENST00000539458 EFCAB5A4FU69 1503 aa28.31■■■□□ 2.12
SLC3A2-213ENST00000539458 TTBK1Q5TCY1 1321 aaPredicted RBP28.27■■■□□ 2.12
SLC3A2-213ENST00000539458 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
SLC3A2-213ENST00000539458 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.11
SLC3A2-213ENST00000539458 P3H3Q8IVL6 736 aa28.23■■■□□ 2.11
SLC3A2-213ENST00000539458 UACAQ9BZF9 1416 aa28.21■■■□□ 2.11
SLC3A2-213ENST00000539458 UHRF1BP1LA0JNW5 1464 aa28.21■■■□□ 2.11
SLC3A2-213ENST00000539458 FHOD3Q2V2M9 1422 aa28.18■■■□□ 2.1
SLC3A2-213ENST00000539458 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
SLC3A2-213ENST00000539458 ARHGAP35Q9NRY4 1499 aa28.17■■■□□ 2.1
SLC3A2-213ENST00000539458 ABCA8O94911 1581 aa28.16■■■□□ 2.1
SLC3A2-213ENST00000539458 PLB1Q6P1J6 1458 aa28.15■■■□□ 2.1
SLC3A2-213ENST00000539458 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
SLC3A2-213ENST00000539458 NPM1P06748 294 aaKnown RBP eCLIP28.09■■■□□ 2.09
SLC3A2-213ENST00000539458 CLIP1P30622 1438 aa28.08■■■□□ 2.09
SLC3A2-213ENST00000539458 KDM5BQ9UGL1 1544 aa28.06■■■□□ 2.08
SLC3A2-213ENST00000539458 RAPGEF6Q8TEU7 1601 aa28.06■■■□□ 2.08
SLC3A2-213ENST00000539458 MAPKBP1O60336 1514 aa28.05■■■□□ 2.08
SLC3A2-213ENST00000539458 FMN1Q68DA7 1419 aa28.02■■■□□ 2.08
SLC3A2-213ENST00000539458 ZCCHC11Q5TAX3 1644 aaKnown RBP28.01■■■□□ 2.07
SLC3A2-213ENST00000539458 CEP162Q5TB80 1403 aa28.01■■■□□ 2.07
SLC3A2-213ENST00000539458 KIF13AQ9H1H9 1805 aa27.95■■■□□ 2.07
SLC3A2-213ENST00000539458 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
SLC3A2-213ENST00000539458 NUP153P49790 1475 aaKnown RBP27.94■■■□□ 2.06
SLC3A2-213ENST00000539458 ASXL2Q76L83 1435 aa27.91■■■□□ 2.06
SLC3A2-213ENST00000539458 ATP10BO94823 1461 aa27.89■■■□□ 2.06
SLC3A2-213ENST00000539458 HECW1Q76N89 1606 aa27.89■■■□□ 2.06
SLC3A2-213ENST00000539458 ABCC10Q5T3U5 1492 aa27.86■■■□□ 2.05
SLC3A2-213ENST00000539458 DIP2BQ9P265 1576 aa27.85■■■□□ 2.05
SLC3A2-213ENST00000539458 PCF11O94913 1555 aaKnown RBP27.84■■■□□ 2.05
SLC3A2-213ENST00000539458 ARID3CA6NKF2 412 aa27.83■■■□□ 2.05
SLC3A2-213ENST00000539458 CASKIN1Q8WXD9 1431 aa27.83■■■□□ 2.05
SLC3A2-213ENST00000539458 WDR7Q9Y4E6 1490 aa27.82■■■□□ 2.04
SLC3A2-213ENST00000539458 FYCO1Q9BQS8 1478 aa27.79■■■□□ 2.04
SLC3A2-213ENST00000539458 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
SLC3A2-213ENST00000539458 CDK13Q14004 1512 aaKnown RBP27.76■■■□□ 2.03
SLC3A2-213ENST00000539458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.75■■■□□ 2.03
SLC3A2-213ENST00000539458 HNRNPUL2Q1KMD3 747 aaKnown RBP27.75■■■□□ 2.03
SLC3A2-213ENST00000539458 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
SLC3A2-213ENST00000539458 GLI2P10070 1586 aa27.74■■■□□ 2.03
SLC3A2-213ENST00000539458 LRRIQ1Q96JM4 1722 aa27.74■■■□□ 2.03
SLC3A2-213ENST00000539458 CCDC18Q5T9S5 1454 aa27.7■■■□□ 2.03
SLC3A2-213ENST00000539458 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
SLC3A2-213ENST00000539458 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
SLC3A2-213ENST00000539458 KDM6BO15054 1643 aa27.65■■■□□ 2.02
SLC3A2-213ENST00000539458 MAP3K4Q9Y6R4 1608 aa27.63■■■□□ 2.01
SLC3A2-213ENST00000539458 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
SLC3A2-213ENST00000539458 TSPOAP1O95153 1857 aa27.63■■■□□ 2.01
SLC3A2-213ENST00000539458 CFAP43Q8NDM7 1665 aa27.6■■■□□ 2.01
SLC3A2-213ENST00000539458 CDK11AQ9UQ88 783 aaPredicted RBP27.6■■■□□ 2.01
SLC3A2-213ENST00000539458 ABCA9Q8IUA7 1624 aa27.58■■■□□ 2.01
SLC3A2-213ENST00000539458 TROQ12816 1431 aaPredicted RBP27.55■■■□□ 2
SLC3A2-213ENST00000539458 PPRC1Q5VV67 1664 aaKnown RBP27.54■■■□□ 2
SLC3A2-213ENST00000539458 MAGI3Q5TCQ9 1506 aa27.51■■■□□ 2
SLC3A2-213ENST00000539458 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
SLC3A2-213ENST00000539458 KIF14Q15058 1648 aa27.5■■□□□ 1.99
SLC3A2-213ENST00000539458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.993e-6■■□□□ 13.1
SLC3A2-213ENST00000539458 TEX14Q8IWB6 1497 aa27.47■■□□□ 1.99
SLC3A2-213ENST00000539458 TTC37Q6PGP7 1564 aa27.47■■□□□ 1.99
SLC3A2-213ENST00000539458 TIAM1Q13009 1591 aa27.46■■□□□ 1.99
SLC3A2-213ENST00000539458 MAP3K1Q13233 1512 aa27.42■■□□□ 1.98
SLC3A2-213ENST00000539458 KDM4FA0A1W2PPD8 638 aa27.42■■□□□ 1.98
SLC3A2-213ENST00000539458 EHBP1L1Q8N3D4 1523 aa27.41■■□□□ 1.98
SLC3A2-213ENST00000539458 MTUS2Q5JR59 1369 aa27.4■■□□□ 1.98
SLC3A2-213ENST00000539458 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
SLC3A2-213ENST00000539458 PLCH2O75038 1416 aa27.33■■□□□ 1.96
SLC3A2-213ENST00000539458 ARAP3Q8WWN8 1544 aa27.32■■□□□ 1.96
SLC3A2-213ENST00000539458 LRRC9Q6ZRR7 1453 aa27.32■■□□□ 1.96
SLC3A2-213ENST00000539458 NEO1Q92859 1461 aa27.32■■□□□ 1.96
SLC3A2-213ENST00000539458 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
SLC3A2-213ENST00000539458 APLP2Q06481 763 aa27.29■■□□□ 1.96
SLC3A2-213ENST00000539458 FANCAO15360 1455 aa27.28■■□□□ 1.96
SLC3A2-213ENST00000539458 PHLDB1Q86UU1 1377 aa27.28■■□□□ 1.96
SLC3A2-213ENST00000539458 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
SLC3A2-213ENST00000539458 PREX2Q70Z35 1606 aa27.27■■□□□ 1.96
SLC3A2-213ENST00000539458 CDC42BPAQ5VT25 1732 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms