RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 CLIP1P30622 1438 aa30.54■■■□□ 2.48
TRPT1-207ENST00000539436 CTTNBP2Q8WZ74 1663 aa30.51■■■□□ 2.47
TRPT1-207ENST00000539436 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
TRPT1-207ENST00000539436 CHD1O14646 1710 aa30.43■■■□□ 2.46
TRPT1-207ENST00000539436 NUP160Q12769 1436 aa30.39■■■□□ 2.46
TRPT1-207ENST00000539436 KIAA0586Q9BVV6 1533 aa30.39■■■□□ 2.45
TRPT1-207ENST00000539436 ARHGAP35Q9NRY4 1499 aa30.37■■■□□ 2.45
TRPT1-207ENST00000539436 P3H3Q8IVL6 736 aa30.36■■■□□ 2.45
TRPT1-207ENST00000539436 IQGAP2Q13576 1575 aa30.36■■■□□ 2.45
TRPT1-207ENST00000539436 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
TRPT1-207ENST00000539436 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
TRPT1-207ENST00000539436 EFCAB5A4FU69 1503 aa30.22■■■□□ 2.43
TRPT1-207ENST00000539436 FHOD3Q2V2M9 1422 aa30.22■■■□□ 2.43
TRPT1-207ENST00000539436 UGGT2Q9NYU1 1516 aa30.21■■■□□ 2.43
TRPT1-207ENST00000539436 SAMD9Q5K651 1589 aa30.19■■■□□ 2.42
TRPT1-207ENST00000539436 VPS8Q8N3P4 1428 aa30.19■■■□□ 2.42
TRPT1-207ENST00000539436 DISP1Q96F81 1524 aa30.13■■■□□ 2.41
TRPT1-207ENST00000539436 OSCARQ8IYS5 282 aa30.08■■■□□ 2.41
TRPT1-207ENST00000539436 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
TRPT1-207ENST00000539436 TTBK1Q5TCY1 1321 aaPredicted RBP30.06■■■□□ 2.4
TRPT1-207ENST00000539436 KIAA0556O60303 1618 aa30.06■■■□□ 2.4
TRPT1-207ENST00000539436 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
TRPT1-207ENST00000539436 PPARGC1BQ86YN6 1023 aaKnown RBP30.03■■■□□ 2.4
TRPT1-207ENST00000539436 CARMIL2Q6F5E8 1435 aa30.02■■■□□ 2.4
TRPT1-207ENST00000539436 SHROOM2Q13796 1616 aa29.99■■■□□ 2.39
TRPT1-207ENST00000539436 FMN1Q68DA7 1419 aa29.99■■■□□ 2.39
TRPT1-207ENST00000539436 ATP1B4Q9UN42 357 aaPredicted RBP29.98■■■□□ 2.39
TRPT1-207ENST00000539436 APLP2Q06481 763 aa29.93■■■□□ 2.38
TRPT1-207ENST00000539436 PCF11O94913 1555 aaKnown RBP29.92■■■□□ 2.38
TRPT1-207ENST00000539436 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
TRPT1-207ENST00000539436 CASKIN1Q8WXD9 1431 aa29.89■■■□□ 2.38
TRPT1-207ENST00000539436 FYCO1Q9BQS8 1478 aa29.84■■■□□ 2.37
TRPT1-207ENST00000539436 PTPRGP23470 1445 aa29.81■■■□□ 2.36
TRPT1-207ENST00000539436 PLB1Q6P1J6 1458 aa29.77■■■□□ 2.36
TRPT1-207ENST00000539436 KANK4Q5T7N3 995 aaPredicted RBP29.77■■■□□ 2.36
TRPT1-207ENST00000539436 ARID3CA6NKF2 412 aa29.76■■■□□ 2.35
TRPT1-207ENST00000539436 RAPGEF6Q8TEU7 1601 aa29.72■■■□□ 2.35
TRPT1-207ENST00000539436 TIAM1Q13009 1591 aa29.71■■■□□ 2.35
TRPT1-207ENST00000539436 HECW1Q76N89 1606 aa29.7■■■□□ 2.35
TRPT1-207ENST00000539436 LRRIQ1Q96JM4 1722 aa29.69■■■□□ 2.34
TRPT1-207ENST00000539436 MAP3K1Q13233 1512 aa29.67■■■□□ 2.34
TRPT1-207ENST00000539436 NUP153P49790 1475 aaKnown RBP29.67■■■□□ 2.34
TRPT1-207ENST00000539436 ABCA8O94911 1581 aa29.67■■■□□ 2.34
TRPT1-207ENST00000539436 EPRSP07814 1512 aaKnown RBP29.65■■■□□ 2.34
TRPT1-207ENST00000539436 CDK13Q14004 1512 aaKnown RBP29.63■■■□□ 2.33
TRPT1-207ENST00000539436 CFAP43Q8NDM7 1665 aa29.63■■■□□ 2.33
TRPT1-207ENST00000539436 UACAQ9BZF9 1416 aa29.61■■■□□ 2.33
TRPT1-207ENST00000539436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.6■■■□□ 2.33
TRPT1-207ENST00000539436 HNRNPUL2Q1KMD3 747 aaKnown RBP29.6■■■□□ 2.33
TRPT1-207ENST00000539436 CCDC18Q5T9S5 1454 aa29.6■■■□□ 2.33
TRPT1-207ENST00000539436 LRRC9Q6ZRR7 1453 aa29.6■■■□□ 2.33
TRPT1-207ENST00000539436 ARHGEF11O15085 1522 aa29.54■■■□□ 2.32
TRPT1-207ENST00000539436 TRIM26Q12899 539 aaPredicted RBP29.53■■■□□ 2.32
TRPT1-207ENST00000539436 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
TRPT1-207ENST00000539436 ATP10BO94823 1461 aa29.51■■■□□ 2.31
TRPT1-207ENST00000539436 ABCC2Q92887 1545 aa29.5■■■□□ 2.31
TRPT1-207ENST00000539436 MAGI3Q5TCQ9 1506 aa29.5■■■□□ 2.31
TRPT1-207ENST00000539436 PCGF6Q9BYE7 350 aa29.47■■■□□ 2.31
TRPT1-207ENST00000539436 UHRF1BP1LA0JNW5 1464 aa29.44■■■□□ 2.3
TRPT1-207ENST00000539436 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
TRPT1-207ENST00000539436 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
TRPT1-207ENST00000539436 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
TRPT1-207ENST00000539436 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
TRPT1-207ENST00000539436 EHBP1L1Q8N3D4 1523 aa29.4■■■□□ 2.3
TRPT1-207ENST00000539436 ADCY10Q96PN6 1610 aa29.39■■■□□ 2.3
TRPT1-207ENST00000539436 PLEKHD1A6NEE1 506 aa29.37■■■□□ 2.29
TRPT1-207ENST00000539436 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
TRPT1-207ENST00000539436 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
TRPT1-207ENST00000539436 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
TRPT1-207ENST00000539436 TROQ12816 1431 aaPredicted RBP29.33■■■□□ 2.29
TRPT1-207ENST00000539436 NCOA2Q15596 1464 aa29.32■■■□□ 2.28
TRPT1-207ENST00000539436 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
TRPT1-207ENST00000539436 SUPT6HQ7KZ85 1726 aaKnown RBP29.3■■■□□ 2.28
TRPT1-207ENST00000539436 NPM1P06748 294 aaKnown RBP eCLIP29.23■■■□□ 2.27
TRPT1-207ENST00000539436 KIF14Q15058 1648 aa29.21■■■□□ 2.27
TRPT1-207ENST00000539436 RRBP1Q9P2E9 1410 aaKnown RBP29.2■■■□□ 2.26
TRPT1-207ENST00000539436 KCNH8Q96L42 1107 aa29.2■■■□□ 2.26
TRPT1-207ENST00000539436 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
TRPT1-207ENST00000539436 MYOM3Q5VTT5 1437 aa29.16■■■□□ 2.26
TRPT1-207ENST00000539436 FGD6Q6ZV73 1430 aa29.13■■■□□ 2.25
TRPT1-207ENST00000539436 FAM50AQ14320 339 aaKnown RBP29.13■■■□□ 2.25
TRPT1-207ENST00000539436 ASXL2Q76L83 1435 aa29.11■■■□□ 2.25
TRPT1-207ENST00000539436 ABCC10Q5T3U5 1492 aa29.1■■■□□ 2.25
TRPT1-207ENST00000539436 WDR7Q9Y4E6 1490 aa29.08■■■□□ 2.25
TRPT1-207ENST00000539436 GPATCH8Q9UKJ3 1502 aaKnown RBP29.06■■■□□ 2.24
TRPT1-207ENST00000539436 ITGAEP38570 1179 aa29.06■■■□□ 2.24
TRPT1-207ENST00000539436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
TRPT1-207ENST00000539436 CFDP1Q9UEE9 299 aaPredicted RBP29.02■■■□□ 2.24
TRPT1-207ENST00000539436 MIA2Q96PC5 1412 aa29.01■■■□□ 2.23
TRPT1-207ENST00000539436 TTC37Q6PGP7 1564 aa29■■■□□ 2.23
TRPT1-207ENST00000539436 PTPN23Q9H3S7 1636 aa29■■■□□ 2.23
TRPT1-207ENST00000539436 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
TRPT1-207ENST00000539436 ZNF777Q9ULD5 760 aaPredicted RBP28.98■■■□□ 2.23
TRPT1-207ENST00000539436 CDC42BPAQ5VT25 1732 aa28.96■■■□□ 2.23
TRPT1-207ENST00000539436 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
TRPT1-207ENST00000539436 ITSN2Q9NZM3 1697 aa28.96■■■□□ 2.23
TRPT1-207ENST00000539436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.96■■■□□ 2.23
TRPT1-207ENST00000539436 TCOF1Q13428 1488 aaKnown RBP28.94■■■□□ 2.22
TRPT1-207ENST00000539436 MAPKBP1O60336 1514 aa28.91■■■□□ 2.22
TRPT1-207ENST00000539436 PREX2Q70Z35 1606 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms