RNA–Protein interactions for RNA: ENST00000539396.5

STRN4-204, Transcript of striatin 4, humanhuman

TSL 2 BASIC

Gene STRN4, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-204ENST00000539396 CCNB3Q8WWL7 1395 aa26.18■■□□□ 1.78
STRN4-204ENST00000539396 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
STRN4-204ENST00000539396 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
STRN4-204ENST00000539396 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.78
STRN4-204ENST00000539396 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
STRN4-204ENST00000539396 EFCAB5A4FU69 1503 aa26.11■■□□□ 1.77
STRN4-204ENST00000539396 PCF11O94913 1555 aaKnown RBP26.1■■□□□ 1.77
STRN4-204ENST00000539396 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
STRN4-204ENST00000539396 ITGAEP38570 1179 aa26.07■■□□□ 1.76
STRN4-204ENST00000539396 DIEXFQ68CQ4 756 aaKnown RBP26.07■■□□□ 1.76
STRN4-204ENST00000539396 TARBP1Q13395 1621 aaKnown RBP26.07■■□□□ 1.76
STRN4-204ENST00000539396 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
STRN4-204ENST00000539396 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
STRN4-204ENST00000539396 CASKIN1Q8WXD9 1431 aa26.02■■□□□ 1.76
STRN4-204ENST00000539396 PHLDB1Q86UU1 1377 aa26.02■■□□□ 1.76
STRN4-204ENST00000539396 FYCO1Q9BQS8 1478 aa26.02■■□□□ 1.76
STRN4-204ENST00000539396 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
STRN4-204ENST00000539396 CFAP43Q8NDM7 1665 aa25.99■■□□□ 1.75
STRN4-204ENST00000539396 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.751e-7■■■■■ 31.9
STRN4-204ENST00000539396 CLSPNQ9HAW4 1339 aa25.98■■□□□ 1.75
STRN4-204ENST00000539396 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
STRN4-204ENST00000539396 FAM50AQ14320 339 aaKnown RBP25.91■■□□□ 1.74
STRN4-204ENST00000539396 SAMD9Q5K651 1589 aa25.9■■□□□ 1.74
STRN4-204ENST00000539396 SNAPC4Q5SXM2 1469 aa25.9■■□□□ 1.74
STRN4-204ENST00000539396 PBRM1Q86U86 1689 aa25.86■■□□□ 1.73
STRN4-204ENST00000539396 RAB3GAP2Q9H2M9 1393 aa25.85■■□□□ 1.73
STRN4-204ENST00000539396 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
STRN4-204ENST00000539396 ZNF608Q9ULD9 1512 aaPredicted RBP25.8■■□□□ 1.72
STRN4-204ENST00000539396 PELP1Q8IZL8 1130 aaKnown RBP25.8■■□□□ 1.72
STRN4-204ENST00000539396 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
STRN4-204ENST00000539396 ADAMTS12P58397 1594 aa25.8■■□□□ 1.72
STRN4-204ENST00000539396 SETD5Q9C0A6 1442 aa25.79■■□□□ 1.72
STRN4-204ENST00000539396 WDR62O43379 1518 aa25.79■■□□□ 1.72
STRN4-204ENST00000539396 MTUS2Q5JR59 1369 aa25.78■■□□□ 1.72
STRN4-204ENST00000539396 IQGAP2Q13576 1575 aa25.72■■□□□ 1.71
STRN4-204ENST00000539396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.71■■□□□ 1.711e-6■■■□□ 16.5
STRN4-204ENST00000539396 ERCC6Q03468 1493 aa25.7■■□□□ 1.71
STRN4-204ENST00000539396 FGD6Q6ZV73 1430 aa25.7■■□□□ 1.7
STRN4-204ENST00000539396 LRRIQ1Q96JM4 1722 aa25.7■■□□□ 1.7
STRN4-204ENST00000539396 THOC2Q8NI27 1593 aaKnown RBP25.68■■□□□ 1.7
STRN4-204ENST00000539396 NCOA2Q15596 1464 aa25.64■■□□□ 1.7
STRN4-204ENST00000539396 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
STRN4-204ENST00000539396 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
STRN4-204ENST00000539396 CCDC18Q5T9S5 1454 aa25.59■■□□□ 1.69
STRN4-204ENST00000539396 MYOM3Q5VTT5 1437 aa25.58■■□□□ 1.69
STRN4-204ENST00000539396 UGGT2Q9NYU1 1516 aa25.58■■□□□ 1.69
STRN4-204ENST00000539396 MIER1Q8N108 512 aa25.58■■□□□ 1.69
STRN4-204ENST00000539396 EIF4G3O43432 1585 aaKnown RBP25.58■■□□□ 1.69
STRN4-204ENST00000539396 MAGI3Q5TCQ9 1506 aa25.57■■□□□ 1.68
STRN4-204ENST00000539396 SCAF1Q9H7N4 1312 aaKnown RBP25.56■■□□□ 1.68
STRN4-204ENST00000539396 KIAA0586Q9BVV6 1533 aa25.56■■□□□ 1.68
STRN4-204ENST00000539396 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
STRN4-204ENST00000539396 HECW1Q76N89 1606 aa25.55■■□□□ 1.68
STRN4-204ENST00000539396 GRIN2AQ12879 1464 aa25.54■■□□□ 1.68
STRN4-204ENST00000539396 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
STRN4-204ENST00000539396 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
STRN4-204ENST00000539396 EPRSP07814 1512 aaKnown RBP25.53■■□□□ 1.68
STRN4-204ENST00000539396 ACIN1Q9UKV3 1341 aaKnown RBP25.53■■□□□ 1.68
STRN4-204ENST00000539396 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
STRN4-204ENST00000539396 SIN3AQ96ST3 1273 aa25.5■■□□□ 1.67
STRN4-204ENST00000539396 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
STRN4-204ENST00000539396 CDK13Q14004 1512 aaKnown RBP25.49■■□□□ 1.67
STRN4-204ENST00000539396 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
STRN4-204ENST00000539396 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
STRN4-204ENST00000539396 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
STRN4-204ENST00000539396 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
STRN4-204ENST00000539396 HFM1A2PYH4 1435 aa25.45■■□□□ 1.66
STRN4-204ENST00000539396 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
STRN4-204ENST00000539396 FBLN2P98095 1184 aa25.44■■□□□ 1.66
STRN4-204ENST00000539396 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
STRN4-204ENST00000539396 SYNJ2O15056 1496 aa25.41■■□□□ 1.66
STRN4-204ENST00000539396 NAIPQ13075 1403 aa25.39■■□□□ 1.65
STRN4-204ENST00000539396 YTHDC1Q96MU7 727 aaKnown RBP25.38■■□□□ 1.65
STRN4-204ENST00000539396 TCOF1Q13428 1488 aaKnown RBP25.36■■□□□ 1.65
STRN4-204ENST00000539396 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
STRN4-204ENST00000539396 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
STRN4-204ENST00000539396 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
STRN4-204ENST00000539396 UACAQ9BZF9 1416 aa25.33■■□□□ 1.65
STRN4-204ENST00000539396 RRP7BPQ9NSQ0 103 aa25.33■■□□□ 1.65
STRN4-204ENST00000539396 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
STRN4-204ENST00000539396 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
STRN4-204ENST00000539396 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
STRN4-204ENST00000539396 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
STRN4-204ENST00000539396 NUP160Q12769 1436 aa25.27■■□□□ 1.64
STRN4-204ENST00000539396 CDK11AQ9UQ88 783 aaPredicted RBP25.27■■□□□ 1.64
STRN4-204ENST00000539396 PPP1R15AO75807 674 aaPredicted RBP25.25■■□□□ 1.63
STRN4-204ENST00000539396 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
STRN4-204ENST00000539396 CARMIL2Q6F5E8 1435 aa25.22■■□□□ 1.63
STRN4-204ENST00000539396 GTF3C3Q9Y5Q9 886 aa25.2■■□□□ 1.62
STRN4-204ENST00000539396 PRG4Q92954 1404 aaPredicted RBP25.18■■□□□ 1.62
STRN4-204ENST00000539396 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
STRN4-204ENST00000539396 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
STRN4-204ENST00000539396 AKNAQ7Z591 1439 aa25.18■■□□□ 1.62
STRN4-204ENST00000539396 TRIM52Q96A61 297 aa25.16■■□□□ 1.62
STRN4-204ENST00000539396 TROQ12816 1431 aaPredicted RBP25.15■■□□□ 1.62
STRN4-204ENST00000539396 GCC2Q8IWJ2 1684 aa25.14■■□□□ 1.62
STRN4-204ENST00000539396 DAPK1P53355 1430 aa25.13■■□□□ 1.61
STRN4-204ENST00000539396 KDM6BO15054 1643 aa25.13■■□□□ 1.61
STRN4-204ENST00000539396 ABCC5O15440 1437 aa25.11■■□□□ 1.61
STRN4-204ENST00000539396 CFDP1Q9UEE9 299 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms