RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
ATP2A2-204ENST00000539276 KIF21BO75037 1637 aa21.78■■□□□ 1.08
ATP2A2-204ENST00000539276 SETD5Q9C0A6 1442 aa21.74■■□□□ 1.07
ATP2A2-204ENST00000539276 TSHZ2Q9NRE2 1034 aa21.71■■□□□ 1.07
ATP2A2-204ENST00000539276 ANP32EQ9BTT0 268 aa21.67■■□□□ 1.06
ATP2A2-204ENST00000539276 ZNF777Q9ULD5 760 aaPredicted RBP21.64■■□□□ 1.05
ATP2A2-204ENST00000539276 MRS2Q9HD23 443 aa21.63■■□□□ 1.05
ATP2A2-204ENST00000539276 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
ATP2A2-204ENST00000539276 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
ATP2A2-204ENST00000539276 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
ATP2A2-204ENST00000539276 EIF4G2P78344 907 aaKnown RBP eCLIP21.6■■□□□ 1.05
ATP2A2-204ENST00000539276 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
ATP2A2-204ENST00000539276 PPP1R15AO75807 674 aaPredicted RBP21.6■■□□□ 1.05
ATP2A2-204ENST00000539276 FBLN2P98095 1184 aa21.59■■□□□ 1.05
ATP2A2-204ENST00000539276 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
ATP2A2-204ENST00000539276 CCER2I3L3R5 266 aa21.52■■□□□ 1.04
ATP2A2-204ENST00000539276 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
ATP2A2-204ENST00000539276 RBM19Q9Y4C8 960 aaKnown RBP21.51■■□□□ 1.03
ATP2A2-204ENST00000539276 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
ATP2A2-204ENST00000539276 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
ATP2A2-204ENST00000539276 IGF1RP08069 1367 aa21.49■■□□□ 1.03
ATP2A2-204ENST00000539276 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
ATP2A2-204ENST00000539276 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
ATP2A2-204ENST00000539276 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
ATP2A2-204ENST00000539276 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
ATP2A2-204ENST00000539276 RTL5Q5HYW3 569 aaPredicted RBP21.45■■□□□ 1.03
ATP2A2-204ENST00000539276 FOXD1Q16676 465 aa21.45■■□□□ 1.02
ATP2A2-204ENST00000539276 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
ATP2A2-204ENST00000539276 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
ATP2A2-204ENST00000539276 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
ATP2A2-204ENST00000539276 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
ATP2A2-204ENST00000539276 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
ATP2A2-204ENST00000539276 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
ATP2A2-204ENST00000539276 KDM2AQ9Y2K7 1162 aa21.38■■□□□ 1.01
ATP2A2-204ENST00000539276 B4GALNT3Q6L9W6 998 aa21.37■■□□□ 1.01
ATP2A2-204ENST00000539276 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
ATP2A2-204ENST00000539276 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
ATP2A2-204ENST00000539276 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
ATP2A2-204ENST00000539276 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
ATP2A2-204ENST00000539276 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
ATP2A2-204ENST00000539276 NBR1Q14596 966 aa21.34■■□□□ 1.01
ATP2A2-204ENST00000539276 ANP32AP39687 249 aaKnown RBP21.33■■□□□ 1.01
ATP2A2-204ENST00000539276 CUX1P39880 1505 aa21.33■■□□□ 1
ATP2A2-204ENST00000539276 LRRC9Q6ZRR7 1453 aa21.31■■□□□ 1
ATP2A2-204ENST00000539276 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
ATP2A2-204ENST00000539276 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
ATP2A2-204ENST00000539276 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
ATP2A2-204ENST00000539276 NCAPD3P42695 1498 aa21.28■■□□□ 1
ATP2A2-204ENST00000539276 FMN1Q68DA7 1419 aa21.28■■□□□ 1
ATP2A2-204ENST00000539276 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
ATP2A2-204ENST00000539276 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
ATP2A2-204ENST00000539276 CFTRP13569 1480 aa21.21■□□□□ 0.99
ATP2A2-204ENST00000539276 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
ATP2A2-204ENST00000539276 CFDP1Q9UEE9 299 aaPredicted RBP21.21■□□□□ 0.99
ATP2A2-204ENST00000539276 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
ATP2A2-204ENST00000539276 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
ATP2A2-204ENST00000539276 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
ATP2A2-204ENST00000539276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.981e-6■■■□□ 15.1
ATP2A2-204ENST00000539276 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
ATP2A2-204ENST00000539276 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
ATP2A2-204ENST00000539276 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
ATP2A2-204ENST00000539276 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
ATP2A2-204ENST00000539276 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.97
ATP2A2-204ENST00000539276 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
ATP2A2-204ENST00000539276 TIAM1Q13009 1591 aa21.13■□□□□ 0.97
ATP2A2-204ENST00000539276 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
ATP2A2-204ENST00000539276 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
ATP2A2-204ENST00000539276 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
ATP2A2-204ENST00000539276 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.96
ATP2A2-204ENST00000539276 WASHC2AQ641Q2 1341 aa21.06■□□□□ 0.96
ATP2A2-204ENST00000539276 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
ATP2A2-204ENST00000539276 PKD2Q13563 968 aa21.04■□□□□ 0.96
ATP2A2-204ENST00000539276 CASKIN1Q8WXD9 1431 aa21.03■□□□□ 0.96
ATP2A2-204ENST00000539276 PLEKHD1A6NEE1 506 aa21.02■□□□□ 0.96
ATP2A2-204ENST00000539276 NOP58Q9Y2X3 529 aaKnown RBP21■□□□□ 0.95
ATP2A2-204ENST00000539276 HMGXB3Q12766 1538 aa21■□□□□ 0.95
ATP2A2-204ENST00000539276 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
ATP2A2-204ENST00000539276 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
ATP2A2-204ENST00000539276 DCAF11Q8TEB1 546 aa20.99■□□□□ 0.95
ATP2A2-204ENST00000539276 MYOM3Q5VTT5 1437 aa20.99■□□□□ 0.95
ATP2A2-204ENST00000539276 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
ATP2A2-204ENST00000539276 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
ATP2A2-204ENST00000539276 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
ATP2A2-204ENST00000539276 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
ATP2A2-204ENST00000539276 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
ATP2A2-204ENST00000539276 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
ATP2A2-204ENST00000539276 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
ATP2A2-204ENST00000539276 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
ATP2A2-204ENST00000539276 HFM1A2PYH4 1435 aa20.9■□□□□ 0.94
ATP2A2-204ENST00000539276 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
ATP2A2-204ENST00000539276 ZBED9Q6R2W3 1325 aa20.89■□□□□ 0.94
ATP2A2-204ENST00000539276 CCDC7Q96M83 1385 aa20.89■□□□□ 0.94
ATP2A2-204ENST00000539276 NESP48681 1621 aa20.89■□□□□ 0.93
ATP2A2-204ENST00000539276 NUDCQ9Y266 331 aa20.89■□□□□ 0.93
ATP2A2-204ENST00000539276 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
ATP2A2-204ENST00000539276 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
ATP2A2-204ENST00000539276 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
ATP2A2-204ENST00000539276 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
ATP2A2-204ENST00000539276 WDR43Q15061 677 aaKnown RBP eCLIP20.87■□□□□ 0.93
ATP2A2-204ENST00000539276 NAIPQ13075 1403 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms