RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PRG4Q92954 1404 aaPredicted RBP25.84■■□□□ 1.73
RAB40B-202ENST00000538809 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
RAB40B-202ENST00000538809 CARMIL1Q5VZK9 1371 aa25.76■■□□□ 1.71
RAB40B-202ENST00000538809 KIAA0586Q9BVV6 1533 aa25.76■■□□□ 1.71
RAB40B-202ENST00000538809 IQGAP2Q13576 1575 aa25.65■■□□□ 1.7
RAB40B-202ENST00000538809 KIF13AQ9H1H9 1805 aa25.62■■□□□ 1.69
RAB40B-202ENST00000538809 ADCY10Q96PN6 1610 aa25.62■■□□□ 1.69
RAB40B-202ENST00000538809 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
RAB40B-202ENST00000538809 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.69
RAB40B-202ENST00000538809 CARMIL2Q6F5E8 1435 aa25.48■■□□□ 1.67
RAB40B-202ENST00000538809 MAPKBP1O60336 1514 aa25.46■■□□□ 1.67
RAB40B-202ENST00000538809 DISP1Q96F81 1524 aa25.46■■□□□ 1.67
RAB40B-202ENST00000538809 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
RAB40B-202ENST00000538809 UGGT2Q9NYU1 1516 aa25.45■■□□□ 1.66
RAB40B-202ENST00000538809 PTPRGP23470 1445 aa25.44■■□□□ 1.66
RAB40B-202ENST00000538809 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
RAB40B-202ENST00000538809 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
RAB40B-202ENST00000538809 DIP2BQ9P265 1576 aa25.41■■□□□ 1.66
RAB40B-202ENST00000538809 PRXQ9BXM0 1461 aa25.4■■□□□ 1.66
RAB40B-202ENST00000538809 NPM1P06748 294 aaKnown RBP eCLIP25.39■■□□□ 1.66
RAB40B-202ENST00000538809 ABCC10Q5T3U5 1492 aa25.35■■□□□ 1.65
RAB40B-202ENST00000538809 TSPOAP1O95153 1857 aa25.34■■□□□ 1.65
RAB40B-202ENST00000538809 ABCC2Q92887 1545 aa25.32■■□□□ 1.64
RAB40B-202ENST00000538809 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
RAB40B-202ENST00000538809 UACAQ9BZF9 1416 aa25.28■■□□□ 1.64
RAB40B-202ENST00000538809 FAM69CQ0P6D2 419 aa25.27■■□□□ 1.64
RAB40B-202ENST00000538809 ZCCHC11Q5TAX3 1644 aaKnown RBP25.26■■□□□ 1.63
RAB40B-202ENST00000538809 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
RAB40B-202ENST00000538809 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
RAB40B-202ENST00000538809 EEA1Q15075 1411 aa25.2■■□□□ 1.63
RAB40B-202ENST00000538809 ASXL2Q76L83 1435 aa25.2■■□□□ 1.62
RAB40B-202ENST00000538809 KDM5BQ9UGL1 1544 aa25.18■■□□□ 1.62
RAB40B-202ENST00000538809 PLB1Q6P1J6 1458 aa25.17■■□□□ 1.62
RAB40B-202ENST00000538809 ABCA8O94911 1581 aa25.15■■□□□ 1.62
RAB40B-202ENST00000538809 PPRC1Q5VV67 1664 aaKnown RBP25.14■■□□□ 1.62
RAB40B-202ENST00000538809 FAM9AQ8IZU1 332 aaPredicted RBP25.13■■□□□ 1.61
RAB40B-202ENST00000538809 SAMD9Q5K651 1589 aa25.13■■□□□ 1.61
RAB40B-202ENST00000538809 GLI2P10070 1586 aa25.12■■□□□ 1.61
RAB40B-202ENST00000538809 KDM6BO15054 1643 aa25.12■■□□□ 1.61
RAB40B-202ENST00000538809 KIF21BO75037 1637 aa25.12■■□□□ 1.61
RAB40B-202ENST00000538809 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
RAB40B-202ENST00000538809 MAP3K4Q9Y6R4 1608 aa25.07■■□□□ 1.6
RAB40B-202ENST00000538809 EPRSP07814 1512 aaKnown RBP25.06■■□□□ 1.6
RAB40B-202ENST00000538809 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
RAB40B-202ENST00000538809 WDR7Q9Y4E6 1490 aa25.02■■□□□ 1.6
RAB40B-202ENST00000538809 RAPGEF6Q8TEU7 1601 aa24.98■■□□□ 1.59
RAB40B-202ENST00000538809 RANGAP1P46060 587 aaPredicted RBP24.96■■□□□ 1.59
RAB40B-202ENST00000538809 CFAP43Q8NDM7 1665 aa24.94■■□□□ 1.58
RAB40B-202ENST00000538809 FHOD3Q2V2M9 1422 aa24.92■■□□□ 1.58
RAB40B-202ENST00000538809 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
RAB40B-202ENST00000538809 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
RAB40B-202ENST00000538809 EFCAB5A4FU69 1503 aa24.89■■□□□ 1.57
RAB40B-202ENST00000538809 ATP10BO94823 1461 aa24.88■■□□□ 1.57
RAB40B-202ENST00000538809 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
RAB40B-202ENST00000538809 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
RAB40B-202ENST00000538809 KCNH8Q96L42 1107 aa24.83■■□□□ 1.57
RAB40B-202ENST00000538809 NUP153P49790 1475 aaKnown RBP24.82■■□□□ 1.56
RAB40B-202ENST00000538809 COL17A1Q9UMD9 1497 aaPredicted RBP24.8■■□□□ 1.56
RAB40B-202ENST00000538809 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
RAB40B-202ENST00000538809 MAGI3Q5TCQ9 1506 aa24.77■■□□□ 1.56
RAB40B-202ENST00000538809 ABCA9Q8IUA7 1624 aa24.77■■□□□ 1.56
RAB40B-202ENST00000538809 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
RAB40B-202ENST00000538809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.71■■□□□ 1.55
RAB40B-202ENST00000538809 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
RAB40B-202ENST00000538809 ARHGAP35Q9NRY4 1499 aa24.7■■□□□ 1.54
RAB40B-202ENST00000538809 CDK13Q14004 1512 aaKnown RBP24.67■■□□□ 1.54
RAB40B-202ENST00000538809 HECW1Q76N89 1606 aa24.65■■□□□ 1.54
RAB40B-202ENST00000538809 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.53
RAB40B-202ENST00000538809 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
RAB40B-202ENST00000538809 TTC37Q6PGP7 1564 aa24.59■■□□□ 1.53
RAB40B-202ENST00000538809 KDM4FA0A1W2PPD8 638 aa24.58■■□□□ 1.53
RAB40B-202ENST00000538809 ARAP3Q8WWN8 1544 aa24.57■■□□□ 1.52
RAB40B-202ENST00000538809 ADGRL1O94910 1474 aa24.57■■□□□ 1.52
RAB40B-202ENST00000538809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.56■■□□□ 1.52
RAB40B-202ENST00000538809 PLEKHD1A6NEE1 506 aa24.54■■□□□ 1.52
RAB40B-202ENST00000538809 PCF11O94913 1555 aaKnown RBP24.53■■□□□ 1.52
RAB40B-202ENST00000538809 NEO1Q92859 1461 aa24.52■■□□□ 1.52
RAB40B-202ENST00000538809 FRMPD1Q5SYB0 1578 aa24.52■■□□□ 1.52
RAB40B-202ENST00000538809 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
RAB40B-202ENST00000538809 ATP1B4Q9UN42 357 aaPredicted RBP24.52■■□□□ 1.52
RAB40B-202ENST00000538809 MYO5CQ9NQX4 1742 aa24.48■■□□□ 1.51
RAB40B-202ENST00000538809 RICTORQ6R327 1708 aa24.47■■□□□ 1.51
RAB40B-202ENST00000538809 KIF14Q15058 1648 aa24.47■■□□□ 1.51
RAB40B-202ENST00000538809 PHLDB1Q86UU1 1377 aa24.46■■□□□ 1.51
RAB40B-202ENST00000538809 FANCAO15360 1455 aa24.44■■□□□ 1.5
RAB40B-202ENST00000538809 RAPGEF3O95398 923 aa24.41■■□□□ 1.5
RAB40B-202ENST00000538809 CLIP1P30622 1438 aa24.39■■□□□ 1.5
RAB40B-202ENST00000538809 AKNAQ7Z591 1439 aa24.39■■□□□ 1.5
RAB40B-202ENST00000538809 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
RAB40B-202ENST00000538809 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
RAB40B-202ENST00000538809 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
RAB40B-202ENST00000538809 DENND4BO75064 1496 aaPredicted RBP24.35■■□□□ 1.49
RAB40B-202ENST00000538809 CCDC18Q5T9S5 1454 aa24.35■■□□□ 1.49
RAB40B-202ENST00000538809 FYCO1Q9BQS8 1478 aa24.34■■□□□ 1.49
RAB40B-202ENST00000538809 CDK11AQ9UQ88 783 aaPredicted RBP24.33■■□□□ 1.49
RAB40B-202ENST00000538809 PLCH2O75038 1416 aa24.33■■□□□ 1.49
RAB40B-202ENST00000538809 CDC42BPBQ9Y5S2 1711 aa24.32■■□□□ 1.48
RAB40B-202ENST00000538809 ZMYM4Q5VZL5 1548 aa24.3■■□□□ 1.48
RAB40B-202ENST00000538809 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
RAB40B-202ENST00000538809 BCORL1Q5H9F3 1711 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 255.3 ms