RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
LINC02408-202ENST00000538573 SMARCA2P51531 1590 aa9.11□□□□□ -0.95
LINC02408-202ENST00000538573 PEG3Q9GZU2 1588 aa9.1□□□□□ -0.95
LINC02408-202ENST00000538573 BAZ1BQ9UIG0 1483 aaKnown RBP9.07□□□□□ -0.96
LINC02408-202ENST00000538573 NCAPD3P42695 1498 aa9.06□□□□□ -0.96
LINC02408-202ENST00000538573 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
LINC02408-202ENST00000538573 SPDYE4A6NLX3 237 aa9.04□□□□□ -0.96
LINC02408-202ENST00000538573 STAG3Q9UJ98 1225 aa9.04□□□□□ -0.96
LINC02408-202ENST00000538573 HMGXB3Q12766 1538 aa9.02□□□□□ -0.97
LINC02408-202ENST00000538573 CLCN6P51797 869 aa8.99□□□□□ -0.97
LINC02408-202ENST00000538573 CCDC88BA6NC98 1476 aa8.97□□□□□ -0.97
LINC02408-202ENST00000538573 FARP1Q9Y4F1 1045 aaPredicted RBP8.97□□□□□ -0.97
LINC02408-202ENST00000538573 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
LINC02408-202ENST00000538573 DCBLD2Q96PD2 775 aa8.94□□□□□ -0.98
LINC02408-202ENST00000538573 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
LINC02408-202ENST00000538573 CREBZFQ9NS37 354 aa8.86□□□□□ -0.99
LINC02408-202ENST00000538573 ZRANB1Q9UGI0 708 aa8.84□□□□□ -0.99
LINC02408-202ENST00000538573 PAK3O75914 559 aaPredicted RBP8.83□□□□□ -1
LINC02408-202ENST00000538573 NPM1P06748 294 aaKnown RBP eCLIP8.83□□□□□ -1
LINC02408-202ENST00000538573 CADPSQ9ULU8 1353 aa8.83□□□□□ -1
LINC02408-202ENST00000538573 CFTRP13569 1480 aa8.81□□□□□ -1
LINC02408-202ENST00000538573 NESP48681 1621 aa8.8□□□□□ -1
LINC02408-202ENST00000538573 LAMC3Q9Y6N6 1575 aa8.78□□□□□ -1
LINC02408-202ENST00000538573 PRDM2Q13029 1718 aa8.78□□□□□ -1
LINC02408-202ENST00000538573 PLEKHG5O94827 1062 aa8.75□□□□□ -1.01
LINC02408-202ENST00000538573 ZNF579Q8NAF0 562 aaKnown RBP8.75□□□□□ -1.01
LINC02408-202ENST00000538573 POTEMA6NI47 508 aa8.74□□□□□ -1.01
LINC02408-202ENST00000538573 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
LINC02408-202ENST00000538573 PDS5BQ9NTI5 1447 aa8.73□□□□□ -1.01
LINC02408-202ENST00000538573 FANCD2Q9BXW9 1451 aa8.73□□□□□ -1.01
LINC02408-202ENST00000538573 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
LINC02408-202ENST00000538573 KIF21AQ7Z4S6 1674 aa8.7□□□□□ -1.02
LINC02408-202ENST00000538573 POTEGQ6S5H5 508 aa8.69□□□□□ -1.02
LINC02408-202ENST00000538573 MIER1Q8N108 512 aa8.69□□□□□ -1.02
LINC02408-202ENST00000538573 PCDH10Q9P2E7 1040 aa8.69□□□□□ -1.02
LINC02408-202ENST00000538573 WRNQ14191 1432 aaPredicted RBP eCLIP8.69□□□□□ -1.02
LINC02408-202ENST00000538573 CEP164Q9UPV0 1460 aa8.69□□□□□ -1.02
LINC02408-202ENST00000538573 PROM2Q8N271 834 aa8.68□□□□□ -1.02
LINC02408-202ENST00000538573 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
LINC02408-202ENST00000538573 ERCC6Q03468 1493 aa8.68□□□□□ -1.02
LINC02408-202ENST00000538573 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
LINC02408-202ENST00000538573 SYNJ1O43426 1573 aa8.65□□□□□ -1.02
LINC02408-202ENST00000538573 GALR2O43603 387 aaPredicted RBP8.65□□□□□ -1.02
LINC02408-202ENST00000538573 PHF12Q96QT6 1004 aa8.65□□□□□ -1.02
LINC02408-202ENST00000538573 TSPYL2Q9H2G4 693 aaPredicted RBP8.65□□□□□ -1.02
LINC02408-202ENST00000538573 CUX1P39880 1505 aa8.64□□□□□ -1.03
LINC02408-202ENST00000538573 TOP2BQ02880 1626 aa8.63□□□□□ -1.03
LINC02408-202ENST00000538573 PLCD3Q8N3E9 789 aa8.63□□□□□ -1.03
LINC02408-202ENST00000538573 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
LINC02408-202ENST00000538573 URB2Q14146 1524 aaKnown RBP8.62□□□□□ -1.03
LINC02408-202ENST00000538573 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
LINC02408-202ENST00000538573 MRC2Q9UBG0 1479 aa8.62□□□□□ -1.03
LINC02408-202ENST00000538573 DNMBPQ6XZF7 1577 aa8.61□□□□□ -1.03
LINC02408-202ENST00000538573 FKBP8Q14318 412 aa8.6□□□□□ -1.03
LINC02408-202ENST00000538573 FGD5Q6ZNL6 1462 aa8.58□□□□□ -1.04
LINC02408-202ENST00000538573 THOC2Q8NI27 1593 aaKnown RBP8.57□□□□□ -1.04
LINC02408-202ENST00000538573 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
LINC02408-202ENST00000538573 MAMSTRQ6ZN01 415 aa8.57□□□□□ -1.04
LINC02408-202ENST00000538573 FAM9AQ8IZU1 332 aaPredicted RBP8.57□□□□□ -1.04
LINC02408-202ENST00000538573 WDR62O43379 1518 aa8.56□□□□□ -1.04
LINC02408-202ENST00000538573 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
LINC02408-202ENST00000538573 SOGA1O94964 1423 aa8.55□□□□□ -1.04
LINC02408-202ENST00000538573 POLA1P09884 1462 aaPredicted RBP8.55□□□□□ -1.04
LINC02408-202ENST00000538573 RAD54L2Q9Y4B4 1467 aa8.54□□□□□ -1.04
LINC02408-202ENST00000538573 MS4A3Q96HJ5 214 aa8.54□□□□□ -1.04
LINC02408-202ENST00000538573 RUSC2Q8N2Y8 1516 aa8.52□□□□□ -1.05
LINC02408-202ENST00000538573 SLC39A7Q92504 469 aa8.51□□□□□ -1.05
LINC02408-202ENST00000538573 METRNQ9UJH8 293 aa8.51□□□□□ -1.05
LINC02408-202ENST00000538573 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
LINC02408-202ENST00000538573 CUX2O14529 1486 aa8.51□□□□□ -1.05
LINC02408-202ENST00000538573 C7P10643 843 aa8.5□□□□□ -1.05
LINC02408-202ENST00000538573 ABCA10Q8WWZ4 1543 aa8.49□□□□□ -1.05
LINC02408-202ENST00000538573 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
LINC02408-202ENST00000538573 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
LINC02408-202ENST00000538573 TARBP1Q13395 1621 aaKnown RBP8.49□□□□□ -1.05
LINC02408-202ENST00000538573 IFT140Q96RY7 1462 aa8.49□□□□□ -1.05
LINC02408-202ENST00000538573 TDRD9Q8NDG6 1382 aaKnown RBP8.48□□□□□ -1.05
LINC02408-202ENST00000538573 EEA1Q15075 1411 aa8.48□□□□□ -1.05
LINC02408-202ENST00000538573 KIF12Q96FN5 646 aa8.48□□□□□ -1.05
LINC02408-202ENST00000538573 FAM163AQ96GL9 167 aaPredicted RBP8.48□□□□□ -1.05
LINC02408-202ENST00000538573 WDR97A6NE52 1622 aa8.47□□□□□ -1.05
LINC02408-202ENST00000538573 RASEFQ8IZ41 740 aa8.47□□□□□ -1.05
LINC02408-202ENST00000538573 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
LINC02408-202ENST00000538573 ATMINO43313 823 aaPredicted RBP8.46□□□□□ -1.06
LINC02408-202ENST00000538573 ASTLQ6HA08 431 aaPredicted RBP8.46□□□□□ -1.06
LINC02408-202ENST00000538573 PELP1Q8IZL8 1130 aaKnown RBP8.46□□□□□ -1.06
LINC02408-202ENST00000538573 AQRO60306 1485 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC02408-202ENST00000538573 LOC105371045A0A1W2PR82 267 aa8.45□□□□□ -1.06
LINC02408-202ENST00000538573 GAPVD1Q14C86 1478 aa8.45□□□□□ -1.06
LINC02408-202ENST00000538573 ZNF608Q9ULD9 1512 aaPredicted RBP8.44□□□□□ -1.06
LINC02408-202ENST00000538573 MAP3K13O43283 966 aa8.44□□□□□ -1.06
LINC02408-202ENST00000538573 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
LINC02408-202ENST00000538573 FAM212AQ96EL1 285 aa8.43□□□□□ -1.06
LINC02408-202ENST00000538573 IGF1RP08069 1367 aa8.43□□□□□ -1.06
LINC02408-202ENST00000538573 PBRM1Q86U86 1689 aa8.41□□□□□ -1.06
LINC02408-202ENST00000538573 EIF4G3O43432 1585 aaKnown RBP8.41□□□□□ -1.06
LINC02408-202ENST00000538573 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
LINC02408-202ENST00000538573 ATN1P54259 1190 aaPredicted RBP8.4□□□□□ -1.06
LINC02408-202ENST00000538573 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
LINC02408-202ENST00000538573 PCDHB13Q9Y5F0 798 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms