RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
CIT-209ENST00000538073 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
CIT-209ENST00000538073 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.27
CIT-209ENST00000538073 PRXQ9BXM0 1461 aa13.33□□□□□ -0.28
CIT-209ENST00000538073 CHD1O14646 1710 aa13.33□□□□□ -0.28
CIT-209ENST00000538073 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
CIT-209ENST00000538073 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
CIT-209ENST00000538073 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
CIT-209ENST00000538073 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
CIT-209ENST00000538073 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
CIT-209ENST00000538073 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
CIT-209ENST00000538073 KIF21BO75037 1637 aa13.28□□□□□ -0.28
CIT-209ENST00000538073 FBLN2P98095 1184 aa13.26□□□□□ -0.29
CIT-209ENST00000538073 NUP160Q12769 1436 aa13.25□□□□□ -0.29
CIT-209ENST00000538073 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
CIT-209ENST00000538073 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
CIT-209ENST00000538073 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
CIT-209ENST00000538073 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
CIT-209ENST00000538073 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CIT-209ENST00000538073 KIAA0586Q9BVV6 1533 aa13.18□□□□□ -0.3
CIT-209ENST00000538073 CTTNBP2Q8WZ74 1663 aa13.18□□□□□ -0.3
CIT-209ENST00000538073 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
CIT-209ENST00000538073 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
CIT-209ENST00000538073 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
CIT-209ENST00000538073 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
CIT-209ENST00000538073 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
CIT-209ENST00000538073 UBTFP17480 764 aaKnown RBP13.09□□□□□ -0.31
CIT-209ENST00000538073 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
CIT-209ENST00000538073 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
CIT-209ENST00000538073 LOC105371045A0A1W2PR82 267 aa13.07□□□□□ -0.32
CIT-209ENST00000538073 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
CIT-209ENST00000538073 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
CIT-209ENST00000538073 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
CIT-209ENST00000538073 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
CIT-209ENST00000538073 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
CIT-209ENST00000538073 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
CIT-209ENST00000538073 KIAA0556O60303 1618 aa13.02□□□□□ -0.33
CIT-209ENST00000538073 EFCAB5A4FU69 1503 aa13.01□□□□□ -0.33
CIT-209ENST00000538073 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
CIT-209ENST00000538073 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
CIT-209ENST00000538073 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
CIT-209ENST00000538073 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
CIT-209ENST00000538073 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
CIT-209ENST00000538073 CLIP1P30622 1438 aa12.96□□□□□ -0.33
CIT-209ENST00000538073 CEP162Q5TB80 1403 aa12.96□□□□□ -0.33
CIT-209ENST00000538073 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
CIT-209ENST00000538073 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
CIT-209ENST00000538073 FHOD3Q2V2M9 1422 aa12.92□□□□□ -0.34
CIT-209ENST00000538073 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
CIT-209ENST00000538073 PTPRGP23470 1445 aa12.9□□□□□ -0.34
CIT-209ENST00000538073 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
CIT-209ENST00000538073 ABCA8O94911 1581 aa12.86□□□□□ -0.35
CIT-209ENST00000538073 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
CIT-209ENST00000538073 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
CIT-209ENST00000538073 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
CIT-209ENST00000538073 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
CIT-209ENST00000538073 RAPGEF6Q8TEU7 1601 aa12.84□□□□□ -0.35
CIT-209ENST00000538073 ABCC2Q92887 1545 aa12.83□□□□□ -0.35
CIT-209ENST00000538073 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
CIT-209ENST00000538073 TTBK1Q5TCY1 1321 aaPredicted RBP12.83□□□□□ -0.36
CIT-209ENST00000538073 PCF11O94913 1555 aaKnown RBP12.81□□□□□ -0.36
CIT-209ENST00000538073 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
CIT-209ENST00000538073 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
CIT-209ENST00000538073 NUP153P49790 1475 aaKnown RBP12.79□□□□□ -0.36
CIT-209ENST00000538073 HECW1Q76N89 1606 aa12.79□□□□□ -0.36
CIT-209ENST00000538073 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
CIT-209ENST00000538073 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
CIT-209ENST00000538073 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
CIT-209ENST00000538073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
CIT-209ENST00000538073 LRRIQ1Q96JM4 1722 aa12.76□□□□□ -0.37
CIT-209ENST00000538073 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
CIT-209ENST00000538073 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
CIT-209ENST00000538073 ATP10BO94823 1461 aa12.74□□□□□ -0.37
CIT-209ENST00000538073 CCDC18Q5T9S5 1454 aa12.72□□□□□ -0.37
CIT-209ENST00000538073 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
CIT-209ENST00000538073 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
CIT-209ENST00000538073 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
CIT-209ENST00000538073 MAP3K1Q13233 1512 aa12.69□□□□□ -0.38
CIT-209ENST00000538073 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
CIT-209ENST00000538073 CFAP43Q8NDM7 1665 aa12.69□□□□□ -0.38
CIT-209ENST00000538073 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
CIT-209ENST00000538073 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
CIT-209ENST00000538073 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
CIT-209ENST00000538073 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
CIT-209ENST00000538073 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.38
CIT-209ENST00000538073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
CIT-209ENST00000538073 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
CIT-209ENST00000538073 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
CIT-209ENST00000538073 PLEKHD1A6NEE1 506 aa12.62□□□□□ -0.39
CIT-209ENST00000538073 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
CIT-209ENST00000538073 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
CIT-209ENST00000538073 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
CIT-209ENST00000538073 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
CIT-209ENST00000538073 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
CIT-209ENST00000538073 APLP2Q06481 763 aa12.59□□□□□ -0.39
CIT-209ENST00000538073 GLI2P10070 1586 aa12.59□□□□□ -0.39
CIT-209ENST00000538073 MTUS2Q5JR59 1369 aa12.58□□□□□ -0.4
CIT-209ENST00000538073 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
CIT-209ENST00000538073 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
CIT-209ENST00000538073 KIF14Q15058 1648 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms