RNA–Protein interactions for RNA: ENST00000537446.5

RAB6A-205, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-205ENST00000537446 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
RAB6A-205ENST00000537446 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
RAB6A-205ENST00000537446 CUL7Q14999 1698 aa12.28□□□□□ -0.44
RAB6A-205ENST00000537446 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
RAB6A-205ENST00000537446 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
RAB6A-205ENST00000537446 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
RAB6A-205ENST00000537446 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
RAB6A-205ENST00000537446 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
RAB6A-205ENST00000537446 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
RAB6A-205ENST00000537446 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.46
RAB6A-205ENST00000537446 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
RAB6A-205ENST00000537446 SHROOM2Q13796 1616 aa12.2□□□□□ -0.46
RAB6A-205ENST00000537446 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
RAB6A-205ENST00000537446 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
RAB6A-205ENST00000537446 NUP160Q12769 1436 aa12.19□□□□□ -0.46
RAB6A-205ENST00000537446 FBLN2P98095 1184 aa12.17□□□□□ -0.46
RAB6A-205ENST00000537446 CHMP7Q8WUX9 453 aaPredicted RBP12.16□□□□□ -0.46
RAB6A-205ENST00000537446 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
RAB6A-205ENST00000537446 CTTNBP2Q8WZ74 1663 aa12.11□□□□□ -0.47
RAB6A-205ENST00000537446 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
RAB6A-205ENST00000537446 IGF1RP08069 1367 aa12.07□□□□□ -0.48
RAB6A-205ENST00000537446 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
RAB6A-205ENST00000537446 KCNA4P22459 653 aa12.04□□□□□ -0.48
RAB6A-205ENST00000537446 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
RAB6A-205ENST00000537446 KIAA0586Q9BVV6 1533 aa12.02□□□□□ -0.48
RAB6A-205ENST00000537446 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
RAB6A-205ENST00000537446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
RAB6A-205ENST00000537446 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
RAB6A-205ENST00000537446 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
RAB6A-205ENST00000537446 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
RAB6A-205ENST00000537446 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
RAB6A-205ENST00000537446 EEA1Q15075 1411 aa11.96□□□□□ -0.49
RAB6A-205ENST00000537446 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
RAB6A-205ENST00000537446 KIF21BO75037 1637 aa11.95□□□□□ -0.5
RAB6A-205ENST00000537446 UGGT2Q9NYU1 1516 aa11.95□□□□□ -0.5
RAB6A-205ENST00000537446 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
RAB6A-205ENST00000537446 ADCY10Q96PN6 1610 aa11.93□□□□□ -0.5
RAB6A-205ENST00000537446 KIF13AQ9H1H9 1805 aa11.9□□□□□ -0.5
RAB6A-205ENST00000537446 DISP1Q96F81 1524 aa11.9□□□□□ -0.5
RAB6A-205ENST00000537446 JPH4Q96JJ6 628 aa11.89□□□□□ -0.51
RAB6A-205ENST00000537446 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
RAB6A-205ENST00000537446 SAMD9Q5K651 1589 aa11.87□□□□□ -0.51
RAB6A-205ENST00000537446 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
RAB6A-205ENST00000537446 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
RAB6A-205ENST00000537446 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
RAB6A-205ENST00000537446 TNIKQ9UKE5 1360 aa11.82□□□□□ -0.52
RAB6A-205ENST00000537446 DIP2BQ9P265 1576 aa11.81□□□□□ -0.52
RAB6A-205ENST00000537446 ZCCHC11Q5TAX3 1644 aaKnown RBP11.81□□□□□ -0.52
RAB6A-205ENST00000537446 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
RAB6A-205ENST00000537446 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
RAB6A-205ENST00000537446 EFCAB5A4FU69 1503 aa11.79□□□□□ -0.52
RAB6A-205ENST00000537446 PTPRGP23470 1445 aa11.78□□□□□ -0.52
RAB6A-205ENST00000537446 ABCA8O94911 1581 aa11.78□□□□□ -0.52
RAB6A-205ENST00000537446 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
RAB6A-205ENST00000537446 KDM5BQ9UGL1 1544 aa11.75□□□□□ -0.53
RAB6A-205ENST00000537446 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
RAB6A-205ENST00000537446 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
RAB6A-205ENST00000537446 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
RAB6A-205ENST00000537446 ABCC10Q5T3U5 1492 aa11.72□□□□□ -0.53
RAB6A-205ENST00000537446 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
RAB6A-205ENST00000537446 FAM9AQ8IZU1 332 aaPredicted RBP11.71□□□□□ -0.53
RAB6A-205ENST00000537446 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
RAB6A-205ENST00000537446 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
RAB6A-205ENST00000537446 MAP3K4Q9Y6R4 1608 aa11.7□□□□□ -0.54
RAB6A-205ENST00000537446 GLI2P10070 1586 aa11.7□□□□□ -0.54
RAB6A-205ENST00000537446 CFAP43Q8NDM7 1665 aa11.68□□□□□ -0.54
RAB6A-205ENST00000537446 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
RAB6A-205ENST00000537446 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
RAB6A-205ENST00000537446 WDR7Q9Y4E6 1490 aa11.66□□□□□ -0.54
RAB6A-205ENST00000537446 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB6A-205ENST00000537446 FHOD3Q2V2M9 1422 aa11.66□□□□□ -0.54
RAB6A-205ENST00000537446 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
RAB6A-205ENST00000537446 LRRIQ1Q96JM4 1722 aa11.65□□□□□ -0.54
RAB6A-205ENST00000537446 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
RAB6A-205ENST00000537446 EPRSP07814 1512 aaKnown RBP11.64□□□□□ -0.55
RAB6A-205ENST00000537446 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
RAB6A-205ENST00000537446 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
RAB6A-205ENST00000537446 KDM6BO15054 1643 aa11.61□□□□□ -0.55
RAB6A-205ENST00000537446 PCF11O94913 1555 aaKnown RBP11.61□□□□□ -0.55
RAB6A-205ENST00000537446 ABCA9Q8IUA7 1624 aa11.6□□□□□ -0.55
RAB6A-205ENST00000537446 ATP10BO94823 1461 aa11.58□□□□□ -0.56
RAB6A-205ENST00000537446 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
RAB6A-205ENST00000537446 CAPN15O75808 1086 aa11.57□□□□□ -0.56
RAB6A-205ENST00000537446 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
RAB6A-205ENST00000537446 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
RAB6A-205ENST00000537446 FAM69CQ0P6D2 419 aa11.56□□□□□ -0.56
RAB6A-205ENST00000537446 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
RAB6A-205ENST00000537446 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
RAB6A-205ENST00000537446 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
RAB6A-205ENST00000537446 RANGAP1P46060 587 aaPredicted RBP11.54□□□□□ -0.56
RAB6A-205ENST00000537446 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
RAB6A-205ENST00000537446 TTC37Q6PGP7 1564 aa11.54□□□□□ -0.56
RAB6A-205ENST00000537446 CFAP74Q9C0B2 1584 aa11.54□□□□□ -0.56
RAB6A-205ENST00000537446 MYO5CQ9NQX4 1742 aa11.53□□□□□ -0.56
RAB6A-205ENST00000537446 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.56
RAB6A-205ENST00000537446 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
RAB6A-205ENST00000537446 KIF14Q15058 1648 aa11.52□□□□□ -0.57
RAB6A-205ENST00000537446 CLIP1P30622 1438 aa11.52□□□□□ -0.57
RAB6A-205ENST00000537446 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
RAB6A-205ENST00000537446 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms