RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 UBTFP17480 764 aaKnown RBP39.5■■■■□ 3.91
HMGA2-208ENST00000537429 KIAA0586Q9BVV6 1533 aa39.48■■■■□ 3.91
HMGA2-208ENST00000537429 CTTNBP2Q8WZ74 1663 aa39.47■■■■□ 3.91
HMGA2-208ENST00000537429 CLASP1Q7Z460 1538 aa39.45■■■■□ 3.91
HMGA2-208ENST00000537429 IQGAP2Q13576 1575 aa39.37■■■■□ 3.89
HMGA2-208ENST00000537429 TNIKQ9UKE5 1360 aa39.36■■■■□ 3.89
HMGA2-208ENST00000537429 JPH4Q96JJ6 628 aa39.27■■■■□ 3.88
HMGA2-208ENST00000537429 SHROOM2Q13796 1616 aa39.24■■■■□ 3.87
HMGA2-208ENST00000537429 UGGT2Q9NYU1 1516 aa39.2■■■■□ 3.87
HMGA2-208ENST00000537429 RANGAP1P46060 587 aaPredicted RBP39.11■■■■□ 3.85
HMGA2-208ENST00000537429 PRG4Q92954 1404 aaPredicted RBP39.09■■■■□ 3.85
HMGA2-208ENST00000537429 DISP1Q96F81 1524 aa39.05■■■■□ 3.84
HMGA2-208ENST00000537429 CEP162Q5TB80 1403 aa39.03■■■■□ 3.84
HMGA2-208ENST00000537429 SAMD9Q5K651 1589 aa39.03■■■■□ 3.84
HMGA2-208ENST00000537429 CARMIL2Q6F5E8 1435 aa39.01■■■■□ 3.84
HMGA2-208ENST00000537429 ERCC6L2Q5T890 1561 aa39■■■■□ 3.83
HMGA2-208ENST00000537429 EFCAB5A4FU69 1503 aa39■■■■□ 3.83
HMGA2-208ENST00000537429 CLIP1P30622 1438 aa39■■■■□ 3.83
HMGA2-208ENST00000537429 KIAA0556O60303 1618 aa38.99■■■■□ 3.83
HMGA2-208ENST00000537429 ARHGAP35Q9NRY4 1499 aa38.97■■■■□ 3.83
HMGA2-208ENST00000537429 ARHGEF11O15085 1522 aa38.92■■■■□ 3.82
HMGA2-208ENST00000537429 P3H3Q8IVL6 736 aa38.91■■■■□ 3.82
HMGA2-208ENST00000537429 DNAJC5Q9H3Z4 198 aa38.88■■■■□ 3.81
HMGA2-208ENST00000537429 RIMBP3CA6NJZ7 1639 aa38.83■■■■□ 3.81
HMGA2-208ENST00000537429 RIMBP3BA6NNM3 1639 aa38.83■■■■□ 3.81
HMGA2-208ENST00000537429 RIMBP3Q9UFD9 1639 aa38.83■■■■□ 3.81
HMGA2-208ENST00000537429 FHOD3Q2V2M9 1422 aa38.83■■■■□ 3.81
HMGA2-208ENST00000537429 ARAP1Q96P48 1450 aa38.79■■■■□ 3.8
HMGA2-208ENST00000537429 TTBK1Q5TCY1 1321 aaPredicted RBP38.75■■■■□ 3.79
HMGA2-208ENST00000537429 PTPRGP23470 1445 aa38.74■■■■□ 3.79
HMGA2-208ENST00000537429 FMN1Q68DA7 1419 aa38.64■■■■□ 3.78
HMGA2-208ENST00000537429 CYB5RLQ6IPT4 315 aa38.55■■■■□ 3.76
HMGA2-208ENST00000537429 PLB1Q6P1J6 1458 aa38.54■■■■□ 3.76
HMGA2-208ENST00000537429 ABCA8O94911 1581 aa38.52■■■■□ 3.76
HMGA2-208ENST00000537429 VPS8Q8N3P4 1428 aa38.51■■■■□ 3.76
HMGA2-208ENST00000537429 UACAQ9BZF9 1416 aa38.51■■■■□ 3.76
HMGA2-208ENST00000537429 RAPGEF6Q8TEU7 1601 aa38.47■■■■□ 3.75
HMGA2-208ENST00000537429 CASKIN1Q8WXD9 1431 aa38.44■■■■□ 3.74
HMGA2-208ENST00000537429 UHRF1BP1LA0JNW5 1464 aa38.43■■■■□ 3.74
HMGA2-208ENST00000537429 PCF11O94913 1555 aaKnown RBP38.43■■■■□ 3.74
HMGA2-208ENST00000537429 ABCC2Q92887 1545 aa38.42■■■■□ 3.74
HMGA2-208ENST00000537429 ADCY10Q96PN6 1610 aa38.39■■■■□ 3.74
HMGA2-208ENST00000537429 FYCO1Q9BQS8 1478 aa38.38■■■■□ 3.73
HMGA2-208ENST00000537429 NUP153P49790 1475 aaKnown RBP38.35■■■■□ 3.73
HMGA2-208ENST00000537429 HECW1Q76N89 1606 aa38.34■■■■□ 3.73
HMGA2-208ENST00000537429 ATP1B4Q9UN42 357 aaPredicted RBP38.33■■■■□ 3.73
HMGA2-208ENST00000537429 KDM5BQ9UGL1 1544 aa38.25■■■■□ 3.71
HMGA2-208ENST00000537429 LRRIQ1Q96JM4 1722 aa38.23■■■■□ 3.71
HMGA2-208ENST00000537429 EPRSP07814 1512 aaKnown RBP38.23■■■■□ 3.71
HMGA2-208ENST00000537429 ATP10BO94823 1461 aa38.22■■■■□ 3.71
HMGA2-208ENST00000537429 ARID3CA6NKF2 412 aa38.21■■■■□ 3.71
HMGA2-208ENST00000537429 CCDC18Q5T9S5 1454 aa38.17■■■■□ 3.7
HMGA2-208ENST00000537429 NPM1P06748 294 aaKnown RBP eCLIP38.17■■■■□ 3.7
HMGA2-208ENST00000537429 ZCCHC11Q5TAX3 1644 aaKnown RBP38.17■■■■□ 3.7
HMGA2-208ENST00000537429 CDK13Q14004 1512 aaKnown RBP38.16■■■■□ 3.7
HMGA2-208ENST00000537429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.11■■■■□ 3.69
HMGA2-208ENST00000537429 HNRNPUL2Q1KMD3 747 aaKnown RBP38.11■■■■□ 3.69
HMGA2-208ENST00000537429 MAP3K1Q13233 1512 aa38.07■■■■□ 3.69
HMGA2-208ENST00000537429 TIAM1Q13009 1591 aa38.05■■■■□ 3.68
HMGA2-208ENST00000537429 CFAP43Q8NDM7 1665 aa38.04■■■■□ 3.68
HMGA2-208ENST00000537429 APLP2Q06481 763 aa38.03■■■■□ 3.68
HMGA2-208ENST00000537429 CDK11AQ9UQ88 783 aaPredicted RBP37.98■■■■□ 3.67
HMGA2-208ENST00000537429 MAPKBP1O60336 1514 aa37.98■■■■□ 3.67
HMGA2-208ENST00000537429 PLEKHD1A6NEE1 506 aa37.96■■■■□ 3.67
HMGA2-208ENST00000537429 ASXL2Q76L83 1435 aa37.96■■■■□ 3.67
HMGA2-208ENST00000537429 MAGI3Q5TCQ9 1506 aa37.94■■■■□ 3.66
HMGA2-208ENST00000537429 WDR7Q9Y4E6 1490 aa37.9■■■■□ 3.66
HMGA2-208ENST00000537429 LRRC9Q6ZRR7 1453 aa37.89■■■■□ 3.66
HMGA2-208ENST00000537429 KANK4Q5T7N3 995 aaPredicted RBP37.89■■■■□ 3.66
HMGA2-208ENST00000537429 TROQ12816 1431 aaPredicted RBP37.87■■■■□ 3.65
HMGA2-208ENST00000537429 MTUS2Q5JR59 1369 aa37.87■■■■□ 3.65
HMGA2-208ENST00000537429 EHBP1L1Q8N3D4 1523 aa37.83■■■■□ 3.65
HMGA2-208ENST00000537429 KCNH8Q96L42 1107 aa37.77■■■■□ 3.64
HMGA2-208ENST00000537429 KIF14Q15058 1648 aa37.71■■■■□ 3.63
HMGA2-208ENST00000537429 PPARGC1BQ86YN6 1023 aaKnown RBP37.7■■■■□ 3.63
HMGA2-208ENST00000537429 ABCC10Q5T3U5 1492 aa37.7■■■■□ 3.63
HMGA2-208ENST00000537429 SUPT6HQ7KZ85 1726 aaKnown RBP37.67■■■■□ 3.62
HMGA2-208ENST00000537429 DIP2BQ9P265 1576 aa37.66■■■■□ 3.62
HMGA2-208ENST00000537429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.64■■■■□ 3.62
HMGA2-208ENST00000537429 GLI2P10070 1586 aa37.62■■■■□ 3.61
HMGA2-208ENST00000537429 NCOA2Q15596 1464 aa37.62■■■■□ 3.61
HMGA2-208ENST00000537429 ABCA9Q8IUA7 1624 aa37.6■■■■□ 3.61
HMGA2-208ENST00000537429 FAM69CQ0P6D2 419 aa37.58■■■■□ 3.61
HMGA2-208ENST00000537429 TTC37Q6PGP7 1564 aa37.58■■■■□ 3.61
HMGA2-208ENST00000537429 TRHP20396 242 aaPredicted RBP37.56■■■■□ 3.6
HMGA2-208ENST00000537429 KIF13AQ9H1H9 1805 aa37.56■■■■□ 3.6
HMGA2-208ENST00000537429 MAP3K4Q9Y6R4 1608 aa37.49■■■■□ 3.59
HMGA2-208ENST00000537429 CCNB3Q8WWL7 1395 aa37.48■■■■□ 3.59
HMGA2-208ENST00000537429 PHLDB1Q86UU1 1377 aa37.47■■■■□ 3.59
HMGA2-208ENST00000537429 GPATCH8Q9UKJ3 1502 aaKnown RBP37.47■■■■□ 3.59
HMGA2-208ENST00000537429 CD109Q6YHK3 1445 aa37.46■■■■□ 3.59
HMGA2-208ENST00000537429 CDC42BPAQ5VT25 1732 aa37.45■■■■□ 3.59
HMGA2-208ENST00000537429 MYO5CQ9NQX4 1742 aa37.44■■■■□ 3.58
HMGA2-208ENST00000537429 PLCH2O75038 1416 aa37.43■■■■□ 3.58
HMGA2-208ENST00000537429 PREX2Q70Z35 1606 aa37.4■■■■□ 3.58
HMGA2-208ENST00000537429 MYOM3Q5VTT5 1437 aa37.4■■■■□ 3.58
HMGA2-208ENST00000537429 ITSN2Q9NZM3 1697 aa37.4■■■■□ 3.58
HMGA2-208ENST00000537429 CDC42BPBQ9Y5S2 1711 aa37.38■■■■□ 3.57
HMGA2-208ENST00000537429 ARAP3Q8WWN8 1544 aa37.38■■■■□ 3.57
HMGA2-208ENST00000537429 CFDP1Q9UEE9 299 aaPredicted RBP37.32■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms