RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
SPPL3-204ENST00000536996 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
SPPL3-204ENST00000536996 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
SPPL3-204ENST00000536996 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
SPPL3-204ENST00000536996 ARHGEF11O15085 1522 aa23.97■■□□□ 1.43
SPPL3-204ENST00000536996 IQGAP2Q13576 1575 aa23.95■■□□□ 1.43
SPPL3-204ENST00000536996 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
SPPL3-204ENST00000536996 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
SPPL3-204ENST00000536996 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
SPPL3-204ENST00000536996 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
SPPL3-204ENST00000536996 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
SPPL3-204ENST00000536996 PRG4Q92954 1404 aaPredicted RBP23.8■■□□□ 1.4
SPPL3-204ENST00000536996 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
SPPL3-204ENST00000536996 KIAA0556O60303 1618 aa23.72■■□□□ 1.39
SPPL3-204ENST00000536996 DISP1Q96F81 1524 aa23.71■■□□□ 1.39
SPPL3-204ENST00000536996 CARMIL2Q6F5E8 1435 aa23.71■■□□□ 1.39
SPPL3-204ENST00000536996 SAMD9Q5K651 1589 aa23.68■■□□□ 1.38
SPPL3-204ENST00000536996 UBTFP17480 764 aaKnown RBP23.61■■□□□ 1.37
SPPL3-204ENST00000536996 EFCAB5A4FU69 1503 aa23.6■■□□□ 1.37
SPPL3-204ENST00000536996 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
SPPL3-204ENST00000536996 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
SPPL3-204ENST00000536996 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
SPPL3-204ENST00000536996 PTPRGP23470 1445 aa23.53■■□□□ 1.36
SPPL3-204ENST00000536996 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
SPPL3-204ENST00000536996 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
SPPL3-204ENST00000536996 ABCA8O94911 1581 aa23.44■■□□□ 1.34
SPPL3-204ENST00000536996 UHRF1BP1LA0JNW5 1464 aa23.43■■□□□ 1.34
SPPL3-204ENST00000536996 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
SPPL3-204ENST00000536996 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
SPPL3-204ENST00000536996 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
SPPL3-204ENST00000536996 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
SPPL3-204ENST00000536996 RAPGEF6Q8TEU7 1601 aa23.39■■□□□ 1.33
SPPL3-204ENST00000536996 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
SPPL3-204ENST00000536996 TTBK1Q5TCY1 1321 aaPredicted RBP23.37■■□□□ 1.33
SPPL3-204ENST00000536996 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
SPPL3-204ENST00000536996 CLIP1P30622 1438 aa23.35■■□□□ 1.33
SPPL3-204ENST00000536996 ZCCHC11Q5TAX3 1644 aaKnown RBP23.34■■□□□ 1.33
SPPL3-204ENST00000536996 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
SPPL3-204ENST00000536996 MAPKBP1O60336 1514 aa23.32■■□□□ 1.32
SPPL3-204ENST00000536996 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
SPPL3-204ENST00000536996 CEP162Q5TB80 1403 aa23.31■■□□□ 1.32
SPPL3-204ENST00000536996 FMN1Q68DA7 1419 aa23.31■■□□□ 1.32
SPPL3-204ENST00000536996 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPPL3-204ENST00000536996 HECW1Q76N89 1606 aa23.25■■□□□ 1.31
SPPL3-204ENST00000536996 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
SPPL3-204ENST00000536996 LRRIQ1Q96JM4 1722 aa23.24■■□□□ 1.31
SPPL3-204ENST00000536996 NUP153P49790 1475 aaKnown RBP23.22■■□□□ 1.31
SPPL3-204ENST00000536996 PCF11O94913 1555 aaKnown RBP23.2■■□□□ 1.3
SPPL3-204ENST00000536996 ATP10BO94823 1461 aa23.17■■□□□ 1.3
SPPL3-204ENST00000536996 DIP2BQ9P265 1576 aa23.15■■□□□ 1.3
SPPL3-204ENST00000536996 FYCO1Q9BQS8 1478 aa23.15■■□□□ 1.3
SPPL3-204ENST00000536996 ASXL2Q76L83 1435 aa23.15■■□□□ 1.3
SPPL3-204ENST00000536996 CASKIN1Q8WXD9 1431 aa23.15■■□□□ 1.3
SPPL3-204ENST00000536996 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
SPPL3-204ENST00000536996 EPRSP07814 1512 aaKnown RBP23.11■■□□□ 1.29
SPPL3-204ENST00000536996 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
SPPL3-204ENST00000536996 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
SPPL3-204ENST00000536996 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
SPPL3-204ENST00000536996 GLI2P10070 1586 aa23.08■■□□□ 1.29
SPPL3-204ENST00000536996 VPS8Q8N3P4 1428 aa23.04■■□□□ 1.28
SPPL3-204ENST00000536996 CFAP43Q8NDM7 1665 aa23.03■■□□□ 1.28
SPPL3-204ENST00000536996 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
SPPL3-204ENST00000536996 ARID3CA6NKF2 412 aa23.02■■□□□ 1.28
SPPL3-204ENST00000536996 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
SPPL3-204ENST00000536996 TSPOAP1O95153 1857 aa23.01■■□□□ 1.27
SPPL3-204ENST00000536996 ATP1B4Q9UN42 357 aaPredicted RBP22.99■■□□□ 1.27
SPPL3-204ENST00000536996 ABCA9Q8IUA7 1624 aa22.98■■□□□ 1.27
SPPL3-204ENST00000536996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
SPPL3-204ENST00000536996 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
SPPL3-204ENST00000536996 FAM69CQ0P6D2 419 aa22.95■■□□□ 1.26
SPPL3-204ENST00000536996 PPRC1Q5VV67 1664 aaKnown RBP22.95■■□□□ 1.26
SPPL3-204ENST00000536996 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
SPPL3-204ENST00000536996 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
SPPL3-204ENST00000536996 KIF14Q15058 1648 aa22.91■■□□□ 1.26
SPPL3-204ENST00000536996 TIAM1Q13009 1591 aa22.91■■□□□ 1.26
SPPL3-204ENST00000536996 TROQ12816 1431 aaPredicted RBP22.9■■□□□ 1.26
SPPL3-204ENST00000536996 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
SPPL3-204ENST00000536996 MAGI3Q5TCQ9 1506 aa22.89■■□□□ 1.26
SPPL3-204ENST00000536996 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
SPPL3-204ENST00000536996 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
SPPL3-204ENST00000536996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.25
SPPL3-204ENST00000536996 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
SPPL3-204ENST00000536996 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
SPPL3-204ENST00000536996 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
SPPL3-204ENST00000536996 TEX14Q8IWB6 1497 aa22.81■■□□□ 1.24
SPPL3-204ENST00000536996 CDC42BPAQ5VT25 1732 aa22.8■■□□□ 1.24
SPPL3-204ENST00000536996 SUPT6HQ7KZ85 1726 aaKnown RBP22.8■■□□□ 1.24
SPPL3-204ENST00000536996 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
SPPL3-204ENST00000536996 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.24
SPPL3-204ENST00000536996 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
SPPL3-204ENST00000536996 PREX2Q70Z35 1606 aa22.77■■□□□ 1.24
SPPL3-204ENST00000536996 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
SPPL3-204ENST00000536996 LRRC9Q6ZRR7 1453 aa22.74■■□□□ 1.23
SPPL3-204ENST00000536996 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
SPPL3-204ENST00000536996 KDM6BO15054 1643 aa22.71■■□□□ 1.23
SPPL3-204ENST00000536996 NEO1Q92859 1461 aa22.69■■□□□ 1.22
SPPL3-204ENST00000536996 PLCH2O75038 1416 aa22.69■■□□□ 1.22
SPPL3-204ENST00000536996 APLP2Q06481 763 aa22.69■■□□□ 1.22
SPPL3-204ENST00000536996 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
SPPL3-204ENST00000536996 FANCAO15360 1455 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms