RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 RAPGEF2Q9Y4G8 1499 aa32.08■■■□□ 2.73
COPS7A-205ENST00000536872 JPH4Q96JJ6 628 aa32.06■■■□□ 2.72
COPS7A-205ENST00000536872 EEA1Q15075 1411 aa32■■■□□ 2.71
COPS7A-205ENST00000536872 KIAA0586Q9BVV6 1533 aa31.98■■■□□ 2.71
COPS7A-205ENST00000536872 PRXQ9BXM0 1461 aa31.96■■■□□ 2.71
COPS7A-205ENST00000536872 ARAP1Q96P48 1450 aa31.95■■■□□ 2.7
COPS7A-205ENST00000536872 PRG4Q92954 1404 aaPredicted RBP31.94■■■□□ 2.7
COPS7A-205ENST00000536872 ERCC6L2Q5T890 1561 aa31.94■■■□□ 2.7
COPS7A-205ENST00000536872 SHROOM2Q13796 1616 aa31.91■■■□□ 2.7
COPS7A-205ENST00000536872 EHMT2Q96KQ7 1210 aa31.87■■■□□ 2.69
COPS7A-205ENST00000536872 IQGAP2Q13576 1575 aa31.8■■■□□ 2.68
COPS7A-205ENST00000536872 TTBK1Q5TCY1 1321 aaPredicted RBP31.78■■■□□ 2.68
COPS7A-205ENST00000536872 CTTNBP2Q8WZ74 1663 aa31.69■■■□□ 2.66
COPS7A-205ENST00000536872 CARMIL2Q6F5E8 1435 aa31.68■■■□□ 2.66
COPS7A-205ENST00000536872 RANGAP1P46060 587 aaPredicted RBP31.66■■■□□ 2.66
COPS7A-205ENST00000536872 UBTFP17480 764 aaKnown RBP31.64■■■□□ 2.66
COPS7A-205ENST00000536872 KIF21BO75037 1637 aa31.63■■■□□ 2.65
COPS7A-205ENST00000536872 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
COPS7A-205ENST00000536872 PTPRGP23470 1445 aa31.59■■■□□ 2.65
COPS7A-205ENST00000536872 DISP1Q96F81 1524 aa31.59■■■□□ 2.65
COPS7A-205ENST00000536872 TNIKQ9UKE5 1360 aa31.57■■■□□ 2.64
COPS7A-205ENST00000536872 P3H3Q8IVL6 736 aa31.55■■■□□ 2.64
COPS7A-205ENST00000536872 GOLGA3Q08378 1498 aa31.53■■■□□ 2.64
COPS7A-205ENST00000536872 KIAA0556O60303 1618 aa31.48■■■□□ 2.63
COPS7A-205ENST00000536872 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
COPS7A-205ENST00000536872 NPM1P06748 294 aaKnown RBP eCLIP31.43■■■□□ 2.62
COPS7A-205ENST00000536872 ADCY10Q96PN6 1610 aa31.35■■■□□ 2.61
COPS7A-205ENST00000536872 UACAQ9BZF9 1416 aa31.33■■■□□ 2.61
COPS7A-205ENST00000536872 SAMD9Q5K651 1589 aa31.28■■■□□ 2.6
COPS7A-205ENST00000536872 FHOD3Q2V2M9 1422 aa31.25■■■□□ 2.59
COPS7A-205ENST00000536872 PLB1Q6P1J6 1458 aa31.25■■■□□ 2.59
COPS7A-205ENST00000536872 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
COPS7A-205ENST00000536872 UHRF1BP1LA0JNW5 1464 aa31.21■■■□□ 2.59
COPS7A-205ENST00000536872 ABCC2Q92887 1545 aa31.21■■■□□ 2.59
COPS7A-205ENST00000536872 ARID3CA6NKF2 412 aa31.19■■■□□ 2.58
COPS7A-205ENST00000536872 EFCAB5A4FU69 1503 aa31.17■■■□□ 2.58
COPS7A-205ENST00000536872 ABCA8O94911 1581 aa31.14■■■□□ 2.58
COPS7A-205ENST00000536872 ARHGAP35Q9NRY4 1499 aa31.12■■■□□ 2.57
COPS7A-205ENST00000536872 FAM69CQ0P6D2 419 aa31.08■■■□□ 2.57
COPS7A-205ENST00000536872 KDM5BQ9UGL1 1544 aa31.08■■■□□ 2.57
COPS7A-205ENST00000536872 MAPKBP1O60336 1514 aa31.07■■■□□ 2.56
COPS7A-205ENST00000536872 ATP1B4Q9UN42 357 aaPredicted RBP31.06■■■□□ 2.56
COPS7A-205ENST00000536872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.05■■■□□ 2.56
COPS7A-205ENST00000536872 HNRNPUL2Q1KMD3 747 aaKnown RBP31.05■■■□□ 2.56
COPS7A-205ENST00000536872 ASXL2Q76L83 1435 aa31.05■■■□□ 2.56
COPS7A-205ENST00000536872 ZCCHC11Q5TAX3 1644 aaKnown RBP31.03■■■□□ 2.56
COPS7A-205ENST00000536872 CLIP1P30622 1438 aa31.02■■■□□ 2.56
COPS7A-205ENST00000536872 RAPGEF6Q8TEU7 1601 aa31.02■■■□□ 2.56
COPS7A-205ENST00000536872 ABCC10Q5T3U5 1492 aa30.98■■■□□ 2.55
COPS7A-205ENST00000536872 ATP10BO94823 1461 aa30.96■■■□□ 2.55
COPS7A-205ENST00000536872 KCNH8Q96L42 1107 aa30.95■■■□□ 2.55
COPS7A-205ENST00000536872 FMN1Q68DA7 1419 aa30.95■■■□□ 2.54
COPS7A-205ENST00000536872 KIF13AQ9H1H9 1805 aa30.92■■■□□ 2.54
COPS7A-205ENST00000536872 NUP153P49790 1475 aaKnown RBP30.92■■■□□ 2.54
COPS7A-205ENST00000536872 CEP162Q5TB80 1403 aa30.9■■■□□ 2.54
COPS7A-205ENST00000536872 DIP2BQ9P265 1576 aa30.89■■■□□ 2.54
COPS7A-205ENST00000536872 WDR7Q9Y4E6 1490 aa30.86■■■□□ 2.53
COPS7A-205ENST00000536872 EPRSP07814 1512 aaKnown RBP30.83■■■□□ 2.53
COPS7A-205ENST00000536872 PLEKHD1A6NEE1 506 aa30.8■■■□□ 2.52
COPS7A-205ENST00000536872 TSPOAP1O95153 1857 aa30.78■■■□□ 2.52
COPS7A-205ENST00000536872 CDK13Q14004 1512 aaKnown RBP30.77■■■□□ 2.52
COPS7A-205ENST00000536872 HECW1Q76N89 1606 aa30.76■■■□□ 2.51
COPS7A-205ENST00000536872 CASKIN1Q8WXD9 1431 aa30.73■■■□□ 2.51
COPS7A-205ENST00000536872 GLI2P10070 1586 aa30.73■■■□□ 2.51
COPS7A-205ENST00000536872 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
COPS7A-205ENST00000536872 CDK11AQ9UQ88 783 aaPredicted RBP30.67■■■□□ 2.5
COPS7A-205ENST00000536872 CD109Q6YHK3 1445 aa30.64■■■□□ 2.49
COPS7A-205ENST00000536872 FYCO1Q9BQS8 1478 aa30.62■■■□□ 2.49
COPS7A-205ENST00000536872 LRRIQ1Q96JM4 1722 aa30.59■■■□□ 2.49
COPS7A-205ENST00000536872 MAP3K4Q9Y6R4 1608 aa30.59■■■□□ 2.49
COPS7A-205ENST00000536872 CCDC18Q5T9S5 1454 aa30.56■■■□□ 2.48
COPS7A-205ENST00000536872 PPRC1Q5VV67 1664 aaKnown RBP30.54■■■□□ 2.48
COPS7A-205ENST00000536872 CFAP43Q8NDM7 1665 aa30.53■■■□□ 2.48
COPS7A-205ENST00000536872 TEX14Q8IWB6 1497 aa30.5■■■□□ 2.47
COPS7A-205ENST00000536872 TROQ12816 1431 aaPredicted RBP30.49■■■□□ 2.47
COPS7A-205ENST00000536872 ABCA9Q8IUA7 1624 aa30.49■■■□□ 2.47
COPS7A-205ENST00000536872 VPS8Q8N3P4 1428 aa30.47■■■□□ 2.47
COPS7A-205ENST00000536872 MAGI3Q5TCQ9 1506 aa30.47■■■□□ 2.47
COPS7A-205ENST00000536872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.45■■■□□ 2.47
COPS7A-205ENST00000536872 KDM6BO15054 1643 aa30.42■■■□□ 2.46
COPS7A-205ENST00000536872 TTC37Q6PGP7 1564 aa30.4■■■□□ 2.46
COPS7A-205ENST00000536872 KIF14Q15058 1648 aa30.39■■■□□ 2.46
COPS7A-205ENST00000536872 MTUS2Q5JR59 1369 aa30.38■■■□□ 2.45
COPS7A-205ENST00000536872 COL17A1Q9UMD9 1497 aaPredicted RBP30.36■■■□□ 2.45
COPS7A-205ENST00000536872 APLP2Q06481 763 aa30.31■■■□□ 2.44
COPS7A-205ENST00000536872 PLCH2O75038 1416 aa30.3■■■□□ 2.44
COPS7A-205ENST00000536872 EFCAB2Q5VUJ9 269 aa30.28■■■□□ 2.44
COPS7A-205ENST00000536872 FANCAO15360 1455 aa30.27■■■□□ 2.44
COPS7A-205ENST00000536872 NEO1Q92859 1461 aa30.26■■■□□ 2.44
COPS7A-205ENST00000536872 PHLDB1Q86UU1 1377 aa30.26■■■□□ 2.43
COPS7A-205ENST00000536872 AKNAQ7Z591 1439 aa30.24■■■□□ 2.43
COPS7A-205ENST00000536872 RAPGEF3O95398 923 aa30.24■■■□□ 2.43
COPS7A-205ENST00000536872 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
COPS7A-205ENST00000536872 MYO5CQ9NQX4 1742 aa30.23■■■□□ 2.43
COPS7A-205ENST00000536872 KANK4Q5T7N3 995 aaPredicted RBP30.22■■■□□ 2.43
COPS7A-205ENST00000536872 ARHGAP5Q13017 1502 aa30.21■■■□□ 2.43
COPS7A-205ENST00000536872 ARAP3Q8WWN8 1544 aa30.2■■■□□ 2.42
COPS7A-205ENST00000536872 EHBP1L1Q8N3D4 1523 aa30.19■■■□□ 2.42
COPS7A-205ENST00000536872 ZNF777Q9ULD5 760 aaPredicted RBP30.19■■■□□ 2.42
COPS7A-205ENST00000536872 CCNB3Q8WWL7 1395 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms