RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 KIAA0586Q9BVV6 1533 aa28.16■■■□□ 2.1
ATL3-202ENST00000535789 PRG4Q92954 1404 aaPredicted RBP28.15■■■□□ 2.1
ATL3-202ENST00000535789 JPH4Q96JJ6 628 aa28.07■■■□□ 2.08
ATL3-202ENST00000535789 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
ATL3-202ENST00000535789 CTTNBP2Q8WZ74 1663 aa28.06■■■□□ 2.08
ATL3-202ENST00000535789 RAPGEF2Q9Y4G8 1499 aa28.05■■■□□ 2.08
ATL3-202ENST00000535789 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
ATL3-202ENST00000535789 PRXQ9BXM0 1461 aa27.95■■■□□ 2.07
ATL3-202ENST00000535789 DISP1Q96F81 1524 aa27.9■■■□□ 2.06
ATL3-202ENST00000535789 UGGT2Q9NYU1 1516 aa27.89■■■□□ 2.06
ATL3-202ENST00000535789 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
ATL3-202ENST00000535789 KIAA0556O60303 1618 aa27.85■■■□□ 2.05
ATL3-202ENST00000535789 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
ATL3-202ENST00000535789 CARMIL2Q6F5E8 1435 aa27.75■■■□□ 2.03
ATL3-202ENST00000535789 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
ATL3-202ENST00000535789 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
ATL3-202ENST00000535789 EEA1Q15075 1411 aa27.72■■■□□ 2.03
ATL3-202ENST00000535789 PTPRGP23470 1445 aa27.71■■■□□ 2.03
ATL3-202ENST00000535789 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
ATL3-202ENST00000535789 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
ATL3-202ENST00000535789 DIP2BQ9P265 1576 aa27.67■■■□□ 2.02
ATL3-202ENST00000535789 KIF21BO75037 1637 aa27.67■■■□□ 2.02
ATL3-202ENST00000535789 ABCC2Q92887 1545 aa27.64■■■□□ 2.02
ATL3-202ENST00000535789 UHRF1BP1LA0JNW5 1464 aa27.63■■■□□ 2.01
ATL3-202ENST00000535789 SAMD9Q5K651 1589 aa27.61■■■□□ 2.01
ATL3-202ENST00000535789 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
ATL3-202ENST00000535789 ZCCHC11Q5TAX3 1644 aaKnown RBP27.59■■■□□ 2.01
ATL3-202ENST00000535789 ABCC10Q5T3U5 1492 aa27.58■■■□□ 2.01
ATL3-202ENST00000535789 UACAQ9BZF9 1416 aa27.58■■■□□ 2
ATL3-202ENST00000535789 GOLGA3Q08378 1498 aa27.57■■■□□ 2
ATL3-202ENST00000535789 FAM9AQ8IZU1 332 aaPredicted RBP27.55■■■□□ 2
ATL3-202ENST00000535789 ABCA8O94911 1581 aa27.55■■■□□ 2
ATL3-202ENST00000535789 KDM5BQ9UGL1 1544 aa27.52■■■□□ 2
ATL3-202ENST00000535789 PLB1Q6P1J6 1458 aa27.52■■■□□ 2
ATL3-202ENST00000535789 TSPOAP1O95153 1857 aa27.51■■□□□ 1.99
ATL3-202ENST00000535789 NPM1P06748 294 aaKnown RBP eCLIP27.46■■□□□ 1.99
ATL3-202ENST00000535789 PPRC1Q5VV67 1664 aaKnown RBP27.45■■□□□ 1.98
ATL3-202ENST00000535789 ASXL2Q76L83 1435 aa27.44■■□□□ 1.98
ATL3-202ENST00000535789 GLI2P10070 1586 aa27.39■■□□□ 1.98
ATL3-202ENST00000535789 FAM69CQ0P6D2 419 aa27.38■■□□□ 1.97
ATL3-202ENST00000535789 MAP3K4Q9Y6R4 1608 aa27.36■■□□□ 1.97
ATL3-202ENST00000535789 RAPGEF6Q8TEU7 1601 aa27.35■■□□□ 1.97
ATL3-202ENST00000535789 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
ATL3-202ENST00000535789 EFCAB5A4FU69 1503 aa27.32■■□□□ 1.96
ATL3-202ENST00000535789 EPRSP07814 1512 aaKnown RBP27.32■■□□□ 1.96
ATL3-202ENST00000535789 FHOD3Q2V2M9 1422 aa27.31■■□□□ 1.96
ATL3-202ENST00000535789 WDR7Q9Y4E6 1490 aa27.28■■□□□ 1.96
ATL3-202ENST00000535789 KDM6BO15054 1643 aa27.23■■□□□ 1.95
ATL3-202ENST00000535789 EHMT2Q96KQ7 1210 aa27.23■■□□□ 1.95
ATL3-202ENST00000535789 RANGAP1P46060 587 aaPredicted RBP27.22■■□□□ 1.95
ATL3-202ENST00000535789 ATP10BO94823 1461 aa27.21■■□□□ 1.95
ATL3-202ENST00000535789 NUP153P49790 1475 aaKnown RBP27.21■■□□□ 1.95
ATL3-202ENST00000535789 CFAP43Q8NDM7 1665 aa27.21■■□□□ 1.95
ATL3-202ENST00000535789 ARHGAP35Q9NRY4 1499 aa27.18■■□□□ 1.94
ATL3-202ENST00000535789 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
ATL3-202ENST00000535789 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
ATL3-202ENST00000535789 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
ATL3-202ENST00000535789 ABCA9Q8IUA7 1624 aa27.08■■□□□ 1.93
ATL3-202ENST00000535789 COL17A1Q9UMD9 1497 aaPredicted RBP27.04■■□□□ 1.92
ATL3-202ENST00000535789 CDK13Q14004 1512 aaKnown RBP27.03■■□□□ 1.92
ATL3-202ENST00000535789 HECW1Q76N89 1606 aa27.01■■□□□ 1.92
ATL3-202ENST00000535789 MAGI3Q5TCQ9 1506 aa27.01■■□□□ 1.91
ATL3-202ENST00000535789 TEX14Q8IWB6 1497 aa27.01■■□□□ 1.91
ATL3-202ENST00000535789 KCNH8Q96L42 1107 aa26.98■■□□□ 1.91
ATL3-202ENST00000535789 CD109Q6YHK3 1445 aa26.98■■□□□ 1.91
ATL3-202ENST00000535789 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
ATL3-202ENST00000535789 FMN1Q68DA7 1419 aa26.95■■□□□ 1.9
ATL3-202ENST00000535789 TTC37Q6PGP7 1564 aa26.93■■□□□ 1.9
ATL3-202ENST00000535789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.89
ATL3-202ENST00000535789 KIF14Q15058 1648 aa26.84■■□□□ 1.89
ATL3-202ENST00000535789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
ATL3-202ENST00000535789 HNRNPUL2Q1KMD3 747 aaKnown RBP26.83■■□□□ 1.89
ATL3-202ENST00000535789 CLIP1P30622 1438 aa26.82■■□□□ 1.88
ATL3-202ENST00000535789 FRMPD1Q5SYB0 1578 aa26.8■■□□□ 1.88
ATL3-202ENST00000535789 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
ATL3-202ENST00000535789 CASKIN1Q8WXD9 1431 aa26.78■■□□□ 1.88
ATL3-202ENST00000535789 MYO5CQ9NQX4 1742 aa26.77■■□□□ 1.88
ATL3-202ENST00000535789 NEO1Q92859 1461 aa26.74■■□□□ 1.87
ATL3-202ENST00000535789 RICTORQ6R327 1708 aa26.74■■□□□ 1.87
ATL3-202ENST00000535789 PLEKHD1A6NEE1 506 aa26.74■■□□□ 1.87
ATL3-202ENST00000535789 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
ATL3-202ENST00000535789 CFAP74Q9C0B2 1584 aa26.73■■□□□ 1.87
ATL3-202ENST00000535789 CCDC18Q5T9S5 1454 aa26.69■■□□□ 1.86
ATL3-202ENST00000535789 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
ATL3-202ENST00000535789 CEP162Q5TB80 1403 aa26.68■■□□□ 1.86
ATL3-202ENST00000535789 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
ATL3-202ENST00000535789 CDC42BPBQ9Y5S2 1711 aa26.67■■□□□ 1.86
ATL3-202ENST00000535789 FANCAO15360 1455 aa26.66■■□□□ 1.86
ATL3-202ENST00000535789 CDC42BPAQ5VT25 1732 aa26.62■■□□□ 1.85
ATL3-202ENST00000535789 PHLDB1Q86UU1 1377 aa26.62■■□□□ 1.85
ATL3-202ENST00000535789 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
ATL3-202ENST00000535789 KDM4FA0A1W2PPD8 638 aa26.61■■□□□ 1.85
ATL3-202ENST00000535789 ADGRL1O94910 1474 aa26.61■■□□□ 1.85
ATL3-202ENST00000535789 PLCH2O75038 1416 aa26.59■■□□□ 1.85
ATL3-202ENST00000535789 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
ATL3-202ENST00000535789 ARHGEF40Q8TER5 1519 aa26.56■■□□□ 1.84
ATL3-202ENST00000535789 ZMYM4Q5VZL5 1548 aa26.55■■□□□ 1.84
ATL3-202ENST00000535789 RAPGEF3O95398 923 aa26.55■■□□□ 1.84
ATL3-202ENST00000535789 SIGLEC1Q9BZZ2 1709 aa26.55■■□□□ 1.84
ATL3-202ENST00000535789 LOC105371045A0A1W2PR82 267 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms