RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
NEK4-207ENST00000535191 TIAM1Q13009 1591 aa20.5■□□□□ 0.87
NEK4-207ENST00000535191 ATP1B4Q9UN42 357 aaPredicted RBP20.5■□□□□ 0.87
NEK4-207ENST00000535191 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
NEK4-207ENST00000535191 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
NEK4-207ENST00000535191 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
NEK4-207ENST00000535191 ITGAEP38570 1179 aa20.47■□□□□ 0.87
NEK4-207ENST00000535191 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
NEK4-207ENST00000535191 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
NEK4-207ENST00000535191 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
NEK4-207ENST00000535191 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
NEK4-207ENST00000535191 CTTNBP2Q8WZ74 1663 aa20.43■□□□□ 0.86
NEK4-207ENST00000535191 PHLDB1Q86UU1 1377 aa20.39■□□□□ 0.86
NEK4-207ENST00000535191 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
NEK4-207ENST00000535191 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
NEK4-207ENST00000535191 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.853e-7■■■□□ 17
NEK4-207ENST00000535191 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
NEK4-207ENST00000535191 FYCO1Q9BQS8 1478 aa20.36■□□□□ 0.85
NEK4-207ENST00000535191 FMN1Q68DA7 1419 aa20.35■□□□□ 0.85
NEK4-207ENST00000535191 MRC2Q9UBG0 1479 aa20.35■□□□□ 0.85
NEK4-207ENST00000535191 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
NEK4-207ENST00000535191 CFAP43Q8NDM7 1665 aa20.33■□□□□ 0.84
NEK4-207ENST00000535191 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
NEK4-207ENST00000535191 SETD5Q9C0A6 1442 aa20.28■□□□□ 0.84
NEK4-207ENST00000535191 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
NEK4-207ENST00000535191 SAMD9Q5K651 1589 aa20.25■□□□□ 0.83
NEK4-207ENST00000535191 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
NEK4-207ENST00000535191 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
NEK4-207ENST00000535191 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
NEK4-207ENST00000535191 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
NEK4-207ENST00000535191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.83
NEK4-207ENST00000535191 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
NEK4-207ENST00000535191 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
NEK4-207ENST00000535191 MIER1Q8N108 512 aa20.2■□□□□ 0.82
NEK4-207ENST00000535191 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
NEK4-207ENST00000535191 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
NEK4-207ENST00000535191 WDR62O43379 1518 aa20.18■□□□□ 0.82
NEK4-207ENST00000535191 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
NEK4-207ENST00000535191 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.82
NEK4-207ENST00000535191 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
NEK4-207ENST00000535191 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
NEK4-207ENST00000535191 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
NEK4-207ENST00000535191 ZNF608Q9ULD9 1512 aaPredicted RBP20.09■□□□□ 0.81
NEK4-207ENST00000535191 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
NEK4-207ENST00000535191 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
NEK4-207ENST00000535191 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
NEK4-207ENST00000535191 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
NEK4-207ENST00000535191 LRRIQ1Q96JM4 1722 aa20.04■□□□□ 0.8
NEK4-207ENST00000535191 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
NEK4-207ENST00000535191 CCDC18Q5T9S5 1454 aa20.03■□□□□ 0.8
NEK4-207ENST00000535191 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.8
NEK4-207ENST00000535191 PTPRKQ15262 1439 aa20.01■□□□□ 0.79
NEK4-207ENST00000535191 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
NEK4-207ENST00000535191 UGGT2Q9NYU1 1516 aa20■□□□□ 0.79
NEK4-207ENST00000535191 HECW1Q76N89 1606 aa20■□□□□ 0.79
NEK4-207ENST00000535191 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
NEK4-207ENST00000535191 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
NEK4-207ENST00000535191 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
NEK4-207ENST00000535191 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
NEK4-207ENST00000535191 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
NEK4-207ENST00000535191 HFM1A2PYH4 1435 aa19.97■□□□□ 0.79
NEK4-207ENST00000535191 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
NEK4-207ENST00000535191 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
NEK4-207ENST00000535191 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
NEK4-207ENST00000535191 GRIN2AQ12879 1464 aa19.95■□□□□ 0.78
NEK4-207ENST00000535191 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
NEK4-207ENST00000535191 NAIPQ13075 1403 aa19.92■□□□□ 0.78
NEK4-207ENST00000535191 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
NEK4-207ENST00000535191 CDK13Q14004 1512 aaKnown RBP19.9■□□□□ 0.78
NEK4-207ENST00000535191 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
NEK4-207ENST00000535191 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
NEK4-207ENST00000535191 DISP1Q96F81 1524 aa19.89■□□□□ 0.78
NEK4-207ENST00000535191 UACAQ9BZF9 1416 aa19.89■□□□□ 0.78
NEK4-207ENST00000535191 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
NEK4-207ENST00000535191 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
NEK4-207ENST00000535191 TCOF1Q13428 1488 aaKnown RBP19.87■□□□□ 0.77
NEK4-207ENST00000535191 RRP7BPQ9NSQ0 103 aa19.87■□□□□ 0.77
NEK4-207ENST00000535191 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
NEK4-207ENST00000535191 FBLN2P98095 1184 aa19.86■□□□□ 0.77
NEK4-207ENST00000535191 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
NEK4-207ENST00000535191 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.76
NEK4-207ENST00000535191 TONSLQ96HA7 1378 aa19.8■□□□□ 0.76
NEK4-207ENST00000535191 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
NEK4-207ENST00000535191 CEP170Q5SW79 1584 aa19.79■□□□□ 0.76
NEK4-207ENST00000535191 JPH4Q96JJ6 628 aa19.78■□□□□ 0.76
NEK4-207ENST00000535191 RAPGEF6Q8TEU7 1601 aa19.78■□□□□ 0.76
NEK4-207ENST00000535191 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
NEK4-207ENST00000535191 NUP160Q12769 1436 aa19.75■□□□□ 0.75
NEK4-207ENST00000535191 AKNAQ7Z591 1439 aa19.75■□□□□ 0.75
NEK4-207ENST00000535191 CARMIL2Q6F5E8 1435 aa19.74■□□□□ 0.75
NEK4-207ENST00000535191 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
NEK4-207ENST00000535191 ZNF644Q9H582 1327 aaPredicted RBP19.72■□□□□ 0.75
NEK4-207ENST00000535191 HIRIP3Q9BW71 556 aaPredicted RBP19.71■□□□□ 0.75
NEK4-207ENST00000535191 PLB1Q6P1J6 1458 aa19.7■□□□□ 0.74
NEK4-207ENST00000535191 MPHOSPH9Q99550 1183 aa19.69■□□□□ 0.74
NEK4-207ENST00000535191 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
NEK4-207ENST00000535191 DAPK1P53355 1430 aa19.68■□□□□ 0.74
NEK4-207ENST00000535191 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
NEK4-207ENST00000535191 ROCK1Q13464 1354 aa19.68■□□□□ 0.74
NEK4-207ENST00000535191 ABCC5O15440 1437 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms