RNA–Protein interactions for RNA: ENST00000535041.5

LRTM2-202, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM2, Length 3,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-202ENST00000535041 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
LRTM2-202ENST00000535041 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
LRTM2-202ENST00000535041 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
LRTM2-202ENST00000535041 DNMBPQ6XZF7 1577 aa18.12■□□□□ 0.49
LRTM2-202ENST00000535041 FBLN2P98095 1184 aa18.11■□□□□ 0.49
LRTM2-202ENST00000535041 CCNB3Q8WWL7 1395 aa18.11■□□□□ 0.49
LRTM2-202ENST00000535041 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
LRTM2-202ENST00000535041 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
LRTM2-202ENST00000535041 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
LRTM2-202ENST00000535041 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
LRTM2-202ENST00000535041 PHLDB1Q86UU1 1377 aa18.02■□□□□ 0.47
LRTM2-202ENST00000535041 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
LRTM2-202ENST00000535041 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
LRTM2-202ENST00000535041 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
LRTM2-202ENST00000535041 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
LRTM2-202ENST00000535041 MIER1Q8N108 512 aa17.98■□□□□ 0.47
LRTM2-202ENST00000535041 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
LRTM2-202ENST00000535041 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
LRTM2-202ENST00000535041 KIF21AQ7Z4S6 1674 aa17.95■□□□□ 0.46
LRTM2-202ENST00000535041 RAB3GAP2Q9H2M9 1393 aa17.95■□□□□ 0.46
LRTM2-202ENST00000535041 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
LRTM2-202ENST00000535041 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
LRTM2-202ENST00000535041 PCF11O94913 1555 aaKnown RBP17.93■□□□□ 0.46
LRTM2-202ENST00000535041 TIAM1Q13009 1591 aa17.92■□□□□ 0.46
LRTM2-202ENST00000535041 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
LRTM2-202ENST00000535041 HIRIP3Q9BW71 556 aaPredicted RBP17.9■□□□□ 0.46
LRTM2-202ENST00000535041 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
LRTM2-202ENST00000535041 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
LRTM2-202ENST00000535041 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
LRTM2-202ENST00000535041 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
LRTM2-202ENST00000535041 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
LRTM2-202ENST00000535041 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
LRTM2-202ENST00000535041 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
LRTM2-202ENST00000535041 CUL7Q14999 1698 aa17.8■□□□□ 0.44
LRTM2-202ENST00000535041 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
LRTM2-202ENST00000535041 FYCO1Q9BQS8 1478 aa17.76■□□□□ 0.43
LRTM2-202ENST00000535041 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
LRTM2-202ENST00000535041 ABCA5Q8WWZ7 1642 aa17.75■□□□□ 0.43
LRTM2-202ENST00000535041 EFCAB5A4FU69 1503 aa17.74■□□□□ 0.43
LRTM2-202ENST00000535041 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
LRTM2-202ENST00000535041 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
LRTM2-202ENST00000535041 FGD6Q6ZV73 1430 aa17.71■□□□□ 0.43
LRTM2-202ENST00000535041 TARBP1Q13395 1621 aaKnown RBP17.7■□□□□ 0.42
LRTM2-202ENST00000535041 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
LRTM2-202ENST00000535041 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
LRTM2-202ENST00000535041 DDX10Q13206 875 aaKnown RBP17.68■□□□□ 0.42
LRTM2-202ENST00000535041 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
LRTM2-202ENST00000535041 FOXD1Q16676 465 aa17.68■□□□□ 0.42
LRTM2-202ENST00000535041 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
LRTM2-202ENST00000535041 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
LRTM2-202ENST00000535041 MAP3K1Q13233 1512 aa17.66■□□□□ 0.42
LRTM2-202ENST00000535041 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
LRTM2-202ENST00000535041 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
LRTM2-202ENST00000535041 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
LRTM2-202ENST00000535041 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
LRTM2-202ENST00000535041 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
LRTM2-202ENST00000535041 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
LRTM2-202ENST00000535041 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
LRTM2-202ENST00000535041 MYOM3Q5VTT5 1437 aa17.61■□□□□ 0.41
LRTM2-202ENST00000535041 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
LRTM2-202ENST00000535041 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
LRTM2-202ENST00000535041 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
LRTM2-202ENST00000535041 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
LRTM2-202ENST00000535041 CCDC18Q5T9S5 1454 aa17.57■□□□□ 0.4
LRTM2-202ENST00000535041 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
LRTM2-202ENST00000535041 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
LRTM2-202ENST00000535041 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
LRTM2-202ENST00000535041 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
LRTM2-202ENST00000535041 SAMD9Q5K651 1589 aa17.56■□□□□ 0.4
LRTM2-202ENST00000535041 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
LRTM2-202ENST00000535041 CFDP1Q9UEE9 299 aaPredicted RBP17.54■□□□□ 0.4
LRTM2-202ENST00000535041 GRIN2AQ12879 1464 aa17.52■□□□□ 0.39
LRTM2-202ENST00000535041 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
LRTM2-202ENST00000535041 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
LRTM2-202ENST00000535041 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
LRTM2-202ENST00000535041 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
LRTM2-202ENST00000535041 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
LRTM2-202ENST00000535041 PLB1Q6P1J6 1458 aa17.49■□□□□ 0.39
LRTM2-202ENST00000535041 WDR62O43379 1518 aa17.49■□□□□ 0.39
LRTM2-202ENST00000535041 KIAA0586Q9BVV6 1533 aa17.49■□□□□ 0.39
LRTM2-202ENST00000535041 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
LRTM2-202ENST00000535041 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
LRTM2-202ENST00000535041 NAIPQ13075 1403 aa17.49■□□□□ 0.39
LRTM2-202ENST00000535041 SUPT6HQ7KZ85 1726 aaKnown RBP17.48■□□□□ 0.39
LRTM2-202ENST00000535041 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
LRTM2-202ENST00000535041 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
LRTM2-202ENST00000535041 HECW1Q76N89 1606 aa17.45■□□□□ 0.38
LRTM2-202ENST00000535041 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
LRTM2-202ENST00000535041 ANP32EQ9BTT0 268 aa17.45■□□□□ 0.38
LRTM2-202ENST00000535041 MPHOSPH9Q99550 1183 aa17.45■□□□□ 0.38
LRTM2-202ENST00000535041 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
LRTM2-202ENST00000535041 PTPN23Q9H3S7 1636 aa17.45■□□□□ 0.38
LRTM2-202ENST00000535041 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
LRTM2-202ENST00000535041 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
LRTM2-202ENST00000535041 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
LRTM2-202ENST00000535041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.38
LRTM2-202ENST00000535041 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
LRTM2-202ENST00000535041 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
LRTM2-202ENST00000535041 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
LRTM2-202ENST00000535041 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms