RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
RPS3-219ENST00000534440 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
RPS3-219ENST00000534440 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
RPS3-219ENST00000534440 CUL7Q14999 1698 aa16.37■□□□□ 0.21
RPS3-219ENST00000534440 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
RPS3-219ENST00000534440 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
RPS3-219ENST00000534440 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
RPS3-219ENST00000534440 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
RPS3-219ENST00000534440 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
RPS3-219ENST00000534440 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
RPS3-219ENST00000534440 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
RPS3-219ENST00000534440 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
RPS3-219ENST00000534440 CEP162Q5TB80 1403 aa16.24■□□□□ 0.19
RPS3-219ENST00000534440 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
RPS3-219ENST00000534440 NUP160Q12769 1436 aa16.16■□□□□ 0.18
RPS3-219ENST00000534440 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
RPS3-219ENST00000534440 CLIP1P30622 1438 aa16.14■□□□□ 0.17
RPS3-219ENST00000534440 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
RPS3-219ENST00000534440 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
RPS3-219ENST00000534440 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
RPS3-219ENST00000534440 IQGAP2Q13576 1575 aa16.06■□□□□ 0.16
RPS3-219ENST00000534440 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
RPS3-219ENST00000534440 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
RPS3-219ENST00000534440 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
RPS3-219ENST00000534440 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
RPS3-219ENST00000534440 SHROOM2Q13796 1616 aa16.01■□□□□ 0.15
RPS3-219ENST00000534440 JPH4Q96JJ6 628 aa16■□□□□ 0.15
RPS3-219ENST00000534440 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
RPS3-219ENST00000534440 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
RPS3-219ENST00000534440 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
RPS3-219ENST00000534440 FHOD3Q2V2M9 1422 aa15.96■□□□□ 0.15
RPS3-219ENST00000534440 DISP1Q96F81 1524 aa15.93■□□□□ 0.14
RPS3-219ENST00000534440 KIAA0556O60303 1618 aa15.92■□□□□ 0.14
RPS3-219ENST00000534440 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
RPS3-219ENST00000534440 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
RPS3-219ENST00000534440 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
RPS3-219ENST00000534440 FAM69CQ0P6D2 419 aa15.84■□□□□ 0.13
RPS3-219ENST00000534440 FOXD1Q16676 465 aa15.84■□□□□ 0.13
RPS3-219ENST00000534440 MAPKBP1O60336 1514 aa15.81■□□□□ 0.12
RPS3-219ENST00000534440 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
RPS3-219ENST00000534440 FYCO1Q9BQS8 1478 aa15.81■□□□□ 0.12
RPS3-219ENST00000534440 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.123e-45■□□□□ 8.2
RPS3-219ENST00000534440 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
RPS3-219ENST00000534440 LRRIQ1Q96JM4 1722 aa15.79■□□□□ 0.12
RPS3-219ENST00000534440 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
RPS3-219ENST00000534440 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
RPS3-219ENST00000534440 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.11
RPS3-219ENST00000534440 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.11
RPS3-219ENST00000534440 TIAM1Q13009 1591 aa15.76■□□□□ 0.11
RPS3-219ENST00000534440 ADCY10Q96PN6 1610 aa15.76■□□□□ 0.11
RPS3-219ENST00000534440 DIP2BQ9P265 1576 aa15.74■□□□□ 0.11
RPS3-219ENST00000534440 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
RPS3-219ENST00000534440 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
RPS3-219ENST00000534440 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
RPS3-219ENST00000534440 PTPRGP23470 1445 aa15.71■□□□□ 0.11
RPS3-219ENST00000534440 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.1
RPS3-219ENST00000534440 ABCA8O94911 1581 aa15.7■□□□□ 0.1
RPS3-219ENST00000534440 KDM4FA0A1W2PPD8 638 aa15.7■□□□□ 0.1
RPS3-219ENST00000534440 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
RPS3-219ENST00000534440 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
RPS3-219ENST00000534440 KANK4Q5T7N3 995 aaPredicted RBP15.68■□□□□ 0.1
RPS3-219ENST00000534440 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
RPS3-219ENST00000534440 EPRSP07814 1512 aaKnown RBP15.66■□□□□ 0.1
RPS3-219ENST00000534440 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
RPS3-219ENST00000534440 MAGI3Q5TCQ9 1506 aa15.65■□□□□ 0.1
RPS3-219ENST00000534440 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
RPS3-219ENST00000534440 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
RPS3-219ENST00000534440 APLP2Q06481 763 aa15.64■□□□□ 0.09
RPS3-219ENST00000534440 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
RPS3-219ENST00000534440 ASXL2Q76L83 1435 aa15.61■□□□□ 0.09
RPS3-219ENST00000534440 UHRF1BP1LA0JNW5 1464 aa15.61■□□□□ 0.09
RPS3-219ENST00000534440 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
RPS3-219ENST00000534440 KDM6BO15054 1643 aa15.59■□□□□ 0.09
RPS3-219ENST00000534440 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
RPS3-219ENST00000534440 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
RPS3-219ENST00000534440 TRIM26Q12899 539 aaPredicted RBP15.56■□□□□ 0.08
RPS3-219ENST00000534440 GLI2P10070 1586 aa15.56■□□□□ 0.08
RPS3-219ENST00000534440 ATP10BO94823 1461 aa15.55■□□□□ 0.08
RPS3-219ENST00000534440 COL17A1Q9UMD9 1497 aaPredicted RBP15.55■□□□□ 0.08
RPS3-219ENST00000534440 KDM5BQ9UGL1 1544 aa15.54■□□□□ 0.08
RPS3-219ENST00000534440 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
RPS3-219ENST00000534440 PCGF6Q9BYE7 350 aa15.53■□□□□ 0.08
RPS3-219ENST00000534440 PHLDB1Q86UU1 1377 aa15.52■□□□□ 0.08
RPS3-219ENST00000534440 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
RPS3-219ENST00000534440 NCOA2Q15596 1464 aa15.5■□□□□ 0.07
RPS3-219ENST00000534440 ZCCHC11Q5TAX3 1644 aaKnown RBP15.5■□□□□ 0.07
RPS3-219ENST00000534440 PPRC1Q5VV67 1664 aaKnown RBP15.48■□□□□ 0.07
RPS3-219ENST00000534440 KIF14Q15058 1648 aa15.48■□□□□ 0.07
RPS3-219ENST00000534440 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
RPS3-219ENST00000534440 RRBP1Q9P2E9 1410 aaKnown RBP15.47■□□□□ 0.07
RPS3-219ENST00000534440 ADRA2BP18089 450 aa15.45■□□□□ 0.06
RPS3-219ENST00000534440 TSPOAP1O95153 1857 aa15.45■□□□□ 0.06
RPS3-219ENST00000534440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
RPS3-219ENST00000534440 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
RPS3-219ENST00000534440 ADGRL1O94910 1474 aa15.43■□□□□ 0.06
RPS3-219ENST00000534440 MAP3K4Q9Y6R4 1608 aa15.42■□□□□ 0.06
RPS3-219ENST00000534440 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
RPS3-219ENST00000534440 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
RPS3-219ENST00000534440 FGD6Q6ZV73 1430 aa15.41■□□□□ 0.06
RPS3-219ENST00000534440 TEX14Q8IWB6 1497 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms