RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 GOLGA3Q08378 1498 aa29.61■■■□□ 2.33
CHID1-223ENST00000534207 KIAA0586Q9BVV6 1533 aa29.61■■■□□ 2.33
CHID1-223ENST00000534207 SHROOM2Q13796 1616 aa29.57■■■□□ 2.32
CHID1-223ENST00000534207 IQGAP2Q13576 1575 aa29.55■■■□□ 2.32
CHID1-223ENST00000534207 UGGT2Q9NYU1 1516 aa29.41■■■□□ 2.3
CHID1-223ENST00000534207 JPH4Q96JJ6 628 aa29.35■■■□□ 2.29
CHID1-223ENST00000534207 ARHGEF11O15085 1522 aa29.32■■■□□ 2.28
CHID1-223ENST00000534207 TNIKQ9UKE5 1360 aa29.31■■■□□ 2.28
CHID1-223ENST00000534207 UBTFP17480 764 aaKnown RBP29.3■■■□□ 2.28
CHID1-223ENST00000534207 RIMBP3CA6NJZ7 1639 aa29.29■■■□□ 2.28
CHID1-223ENST00000534207 RIMBP3BA6NNM3 1639 aa29.29■■■□□ 2.28
CHID1-223ENST00000534207 RIMBP3Q9UFD9 1639 aa29.29■■■□□ 2.28
CHID1-223ENST00000534207 PRG4Q92954 1404 aaPredicted RBP29.28■■■□□ 2.28
CHID1-223ENST00000534207 SAMD9Q5K651 1589 aa29.27■■■□□ 2.28
CHID1-223ENST00000534207 KIAA0556O60303 1618 aa29.26■■■□□ 2.27
CHID1-223ENST00000534207 CARMIL2Q6F5E8 1435 aa29.26■■■□□ 2.27
CHID1-223ENST00000534207 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
CHID1-223ENST00000534207 DISP1Q96F81 1524 aa29.25■■■□□ 2.27
CHID1-223ENST00000534207 ERCC6L2Q5T890 1561 aa29.22■■■□□ 2.27
CHID1-223ENST00000534207 EHMT2Q96KQ7 1210 aa29.15■■■□□ 2.26
CHID1-223ENST00000534207 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
CHID1-223ENST00000534207 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
CHID1-223ENST00000534207 ARHGAP35Q9NRY4 1499 aa29.06■■■□□ 2.24
CHID1-223ENST00000534207 CLIP1P30622 1438 aa29.03■■■□□ 2.24
CHID1-223ENST00000534207 CEP162Q5TB80 1403 aa29.02■■■□□ 2.24
CHID1-223ENST00000534207 PTPRGP23470 1445 aa29■■■□□ 2.23
CHID1-223ENST00000534207 FHOD3Q2V2M9 1422 aa28.94■■■□□ 2.22
CHID1-223ENST00000534207 ABCA8O94911 1581 aa28.91■■■□□ 2.22
CHID1-223ENST00000534207 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
CHID1-223ENST00000534207 FMN1Q68DA7 1419 aa28.9■■■□□ 2.22
CHID1-223ENST00000534207 UHRF1BP1LA0JNW5 1464 aa28.9■■■□□ 2.22
CHID1-223ENST00000534207 ABCC2Q92887 1545 aa28.87■■■□□ 2.21
CHID1-223ENST00000534207 UACAQ9BZF9 1416 aa28.86■■■□□ 2.21
CHID1-223ENST00000534207 P3H3Q8IVL6 736 aa28.86■■■□□ 2.21
CHID1-223ENST00000534207 RAPGEF6Q8TEU7 1601 aa28.86■■■□□ 2.21
CHID1-223ENST00000534207 ADCY10Q96PN6 1610 aa28.85■■■□□ 2.21
CHID1-223ENST00000534207 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
CHID1-223ENST00000534207 PLB1Q6P1J6 1458 aa28.79■■■□□ 2.2
CHID1-223ENST00000534207 HECW1Q76N89 1606 aa28.76■■■□□ 2.19
CHID1-223ENST00000534207 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
CHID1-223ENST00000534207 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
CHID1-223ENST00000534207 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
CHID1-223ENST00000534207 TTBK1Q5TCY1 1321 aaPredicted RBP28.71■■■□□ 2.19
CHID1-223ENST00000534207 PCF11O94913 1555 aaKnown RBP28.71■■■□□ 2.19
CHID1-223ENST00000534207 NUP153P49790 1475 aaKnown RBP28.69■■■□□ 2.18
CHID1-223ENST00000534207 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
CHID1-223ENST00000534207 ZCCHC11Q5TAX3 1644 aaKnown RBP28.68■■■□□ 2.18
CHID1-223ENST00000534207 LRRIQ1Q96JM4 1722 aa28.64■■■□□ 2.18
CHID1-223ENST00000534207 MAPKBP1O60336 1514 aa28.64■■■□□ 2.17
CHID1-223ENST00000534207 CCDC18Q5T9S5 1454 aa28.6■■■□□ 2.17
CHID1-223ENST00000534207 NPM1P06748 294 aaKnown RBP eCLIP28.59■■■□□ 2.17
CHID1-223ENST00000534207 ATP10BO94823 1461 aa28.59■■■□□ 2.17
CHID1-223ENST00000534207 EPRSP07814 1512 aaKnown RBP28.59■■■□□ 2.17
CHID1-223ENST00000534207 CFAP43Q8NDM7 1665 aa28.51■■■□□ 2.15
CHID1-223ENST00000534207 MAP3K1Q13233 1512 aa28.49■■■□□ 2.15
CHID1-223ENST00000534207 CDK13Q14004 1512 aaKnown RBP28.48■■■□□ 2.15
CHID1-223ENST00000534207 ASXL2Q76L83 1435 aa28.45■■■□□ 2.15
CHID1-223ENST00000534207 WDR7Q9Y4E6 1490 aa28.45■■■□□ 2.14
CHID1-223ENST00000534207 TIAM1Q13009 1591 aa28.42■■■□□ 2.14
CHID1-223ENST00000534207 ATP1B4Q9UN42 357 aaPredicted RBP28.41■■■□□ 2.14
CHID1-223ENST00000534207 CDK11AQ9UQ88 783 aaPredicted RBP28.39■■■□□ 2.14
CHID1-223ENST00000534207 GLI2P10070 1586 aa28.37■■■□□ 2.13
CHID1-223ENST00000534207 DIP2BQ9P265 1576 aa28.37■■■□□ 2.13
CHID1-223ENST00000534207 KIF13AQ9H1H9 1805 aa28.37■■■□□ 2.13
CHID1-223ENST00000534207 ABCC10Q5T3U5 1492 aa28.36■■■□□ 2.13
CHID1-223ENST00000534207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
CHID1-223ENST00000534207 HNRNPUL2Q1KMD3 747 aaKnown RBP28.35■■■□□ 2.13
CHID1-223ENST00000534207 PLEKHD1A6NEE1 506 aa28.34■■■□□ 2.13
CHID1-223ENST00000534207 TROQ12816 1431 aaPredicted RBP28.34■■■□□ 2.13
CHID1-223ENST00000534207 ARID3CA6NKF2 412 aa28.33■■■□□ 2.13
CHID1-223ENST00000534207 EHBP1L1Q8N3D4 1523 aa28.32■■■□□ 2.12
CHID1-223ENST00000534207 MAGI3Q5TCQ9 1506 aa28.3■■■□□ 2.12
CHID1-223ENST00000534207 KIF14Q15058 1648 aa28.29■■■□□ 2.12
CHID1-223ENST00000534207 ABCA9Q8IUA7 1624 aa28.29■■■□□ 2.12
CHID1-223ENST00000534207 APLP2Q06481 763 aa28.25■■■□□ 2.11
CHID1-223ENST00000534207 MAP3K4Q9Y6R4 1608 aa28.25■■■□□ 2.11
CHID1-223ENST00000534207 LRRC9Q6ZRR7 1453 aa28.24■■■□□ 2.11
CHID1-223ENST00000534207 MTUS2Q5JR59 1369 aa28.23■■■□□ 2.11
CHID1-223ENST00000534207 SUPT6HQ7KZ85 1726 aaKnown RBP28.22■■■□□ 2.11
CHID1-223ENST00000534207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.2■■■□□ 2.1
CHID1-223ENST00000534207 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
CHID1-223ENST00000534207 MYO5CQ9NQX4 1742 aa28.16■■■□□ 2.1
CHID1-223ENST00000534207 FAM69CQ0P6D2 419 aa28.14■■■□□ 2.1
CHID1-223ENST00000534207 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
CHID1-223ENST00000534207 KCNH8Q96L42 1107 aa28.13■■■□□ 2.09
CHID1-223ENST00000534207 PPRC1Q5VV67 1664 aaKnown RBP28.11■■■□□ 2.09
CHID1-223ENST00000534207 CDC42BPAQ5VT25 1732 aa28.1■■■□□ 2.09
CHID1-223ENST00000534207 ITSN2Q9NZM3 1697 aa28.1■■■□□ 2.09
CHID1-223ENST00000534207 PREX2Q70Z35 1606 aa28.09■■■□□ 2.09
CHID1-223ENST00000534207 CD109Q6YHK3 1445 aa28.08■■■□□ 2.09
CHID1-223ENST00000534207 TSPOAP1O95153 1857 aa28.07■■■□□ 2.08
CHID1-223ENST00000534207 KANK4Q5T7N3 995 aaPredicted RBP28.07■■■□□ 2.08
CHID1-223ENST00000534207 NCOA2Q15596 1464 aa28.07■■■□□ 2.08
CHID1-223ENST00000534207 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
CHID1-223ENST00000534207 CFAP74Q9C0B2 1584 aa28.06■■■□□ 2.08
CHID1-223ENST00000534207 CDC42BPBQ9Y5S2 1711 aa28.05■■■□□ 2.08
CHID1-223ENST00000534207 TEX14Q8IWB6 1497 aa28.04■■■□□ 2.08
CHID1-223ENST00000534207 PLCH2O75038 1416 aa28.02■■■□□ 2.08
CHID1-223ENST00000534207 GPATCH8Q9UKJ3 1502 aaKnown RBP27.99■■■□□ 2.07
CHID1-223ENST00000534207 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms