RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
RTL1-201ENST00000534062 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
RTL1-201ENST00000534062 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.05
RTL1-201ENST00000534062 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
RTL1-201ENST00000534062 CUL7Q14999 1698 aa14.75□□□□□ -0.05
RTL1-201ENST00000534062 EIF4G3O43432 1585 aaKnown RBP14.74□□□□□ -0.05
RTL1-201ENST00000534062 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
RTL1-201ENST00000534062 TRIM26Q12899 539 aaPredicted RBP14.71□□□□□ -0.06
RTL1-201ENST00000534062 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
RTL1-201ENST00000534062 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
RTL1-201ENST00000534062 FHOD3Q2V2M9 1422 aa14.67□□□□□ -0.06
RTL1-201ENST00000534062 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
RTL1-201ENST00000534062 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
RTL1-201ENST00000534062 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
RTL1-201ENST00000534062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
RTL1-201ENST00000534062 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
RTL1-201ENST00000534062 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
RTL1-201ENST00000534062 GRIN2AQ12879 1464 aa14.62□□□□□ -0.07
RTL1-201ENST00000534062 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
RTL1-201ENST00000534062 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
RTL1-201ENST00000534062 CTTNBP2Q8WZ74 1663 aa14.58□□□□□ -0.08
RTL1-201ENST00000534062 KANK4Q5T7N3 995 aaPredicted RBP14.55□□□□□ -0.08
RTL1-201ENST00000534062 IQGAP2Q13576 1575 aa14.55□□□□□ -0.08
RTL1-201ENST00000534062 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
RTL1-201ENST00000534062 ITGAEP38570 1179 aa14.51□□□□□ -0.09
RTL1-201ENST00000534062 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
RTL1-201ENST00000534062 EFCAB5A4FU69 1503 aa14.5□□□□□ -0.09
RTL1-201ENST00000534062 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
RTL1-201ENST00000534062 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
RTL1-201ENST00000534062 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
RTL1-201ENST00000534062 NUP160Q12769 1436 aa14.44□□□□□ -0.1
RTL1-201ENST00000534062 CHD1O14646 1710 aa14.43□□□□□ -0.1
RTL1-201ENST00000534062 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
RTL1-201ENST00000534062 PRG4Q92954 1404 aaPredicted RBP14.43□□□□□ -0.1
RTL1-201ENST00000534062 FAM50AQ14320 339 aaKnown RBP14.43□□□□□ -0.1
RTL1-201ENST00000534062 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
RTL1-201ENST00000534062 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
RTL1-201ENST00000534062 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
RTL1-201ENST00000534062 SAMD9Q5K651 1589 aa14.39□□□□□ -0.11
RTL1-201ENST00000534062 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
RTL1-201ENST00000534062 DISP1Q96F81 1524 aa14.37□□□□□ -0.11
RTL1-201ENST00000534062 PTPRGP23470 1445 aa14.37□□□□□ -0.11
RTL1-201ENST00000534062 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
RTL1-201ENST00000534062 KIAA0556O60303 1618 aa14.36□□□□□ -0.11
RTL1-201ENST00000534062 TIAM1Q13009 1591 aa14.35□□□□□ -0.11
RTL1-201ENST00000534062 PLB1Q6P1J6 1458 aa14.34□□□□□ -0.11
RTL1-201ENST00000534062 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
RTL1-201ENST00000534062 CCER1Q8TC90 406 aaPredicted RBP14.33□□□□□ -0.12
RTL1-201ENST00000534062 CDK13Q14004 1512 aaKnown RBP14.32□□□□□ -0.12
RTL1-201ENST00000534062 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
RTL1-201ENST00000534062 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
RTL1-201ENST00000534062 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
RTL1-201ENST00000534062 EPRSP07814 1512 aaKnown RBP14.28□□□□□ -0.12
RTL1-201ENST00000534062 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
RTL1-201ENST00000534062 PHLDB1Q86UU1 1377 aa14.27□□□□□ -0.13
RTL1-201ENST00000534062 CCNB3Q8WWL7 1395 aa14.27□□□□□ -0.13
RTL1-201ENST00000534062 CCDC18Q5T9S5 1454 aa14.26□□□□□ -0.13
RTL1-201ENST00000534062 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
RTL1-201ENST00000534062 RAPGEF6Q8TEU7 1601 aa14.24□□□□□ -0.13
RTL1-201ENST00000534062 NUP153P49790 1475 aaKnown RBP14.23□□□□□ -0.13
RTL1-201ENST00000534062 MAP3K1Q13233 1512 aa14.22□□□□□ -0.13
RTL1-201ENST00000534062 CFAP43Q8NDM7 1665 aa14.21□□□□□ -0.13
RTL1-201ENST00000534062 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
RTL1-201ENST00000534062 NCOA2Q15596 1464 aa14.2□□□□□ -0.14
RTL1-201ENST00000534062 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
RTL1-201ENST00000534062 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
RTL1-201ENST00000534062 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
RTL1-201ENST00000534062 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
RTL1-201ENST00000534062 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
RTL1-201ENST00000534062 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
RTL1-201ENST00000534062 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
RTL1-201ENST00000534062 NEUROD1Q13562 356 aa14.17□□□□□ -0.14
RTL1-201ENST00000534062 LRRIQ1Q96JM4 1722 aa14.16□□□□□ -0.14
RTL1-201ENST00000534062 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
RTL1-201ENST00000534062 ATP10BO94823 1461 aa14.15□□□□□ -0.14
RTL1-201ENST00000534062 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
RTL1-201ENST00000534062 SUPT6HQ7KZ85 1726 aaKnown RBP14.14□□□□□ -0.15
RTL1-201ENST00000534062 FGD6Q6ZV73 1430 aa14.14□□□□□ -0.15
RTL1-201ENST00000534062 MYOM3Q5VTT5 1437 aa14.13□□□□□ -0.15
RTL1-201ENST00000534062 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
RTL1-201ENST00000534062 SHROOM2Q13796 1616 aa14.12□□□□□ -0.15
RTL1-201ENST00000534062 GTF3C3Q9Y5Q9 886 aa14.12□□□□□ -0.15
RTL1-201ENST00000534062 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
RTL1-201ENST00000534062 RRP7BPQ9NSQ0 103 aa14.12□□□□□ -0.15
RTL1-201ENST00000534062 ABCA8O94911 1581 aa14.11□□□□□ -0.15
RTL1-201ENST00000534062 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
RTL1-201ENST00000534062 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
RTL1-201ENST00000534062 ABCC2Q92887 1545 aa14.07□□□□□ -0.16
RTL1-201ENST00000534062 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
RTL1-201ENST00000534062 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
RTL1-201ENST00000534062 KIF14Q15058 1648 aa14.03□□□□□ -0.16
RTL1-201ENST00000534062 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.16
RTL1-201ENST00000534062 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
RTL1-201ENST00000534062 RAB3GAP2Q9H2M9 1393 aa14.01□□□□□ -0.17
RTL1-201ENST00000534062 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
RTL1-201ENST00000534062 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
RTL1-201ENST00000534062 PTPN23Q9H3S7 1636 aa14.01□□□□□ -0.17
RTL1-201ENST00000534062 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
RTL1-201ENST00000534062 MIA2Q96PC5 1412 aa13.99□□□□□ -0.17
RTL1-201ENST00000534062 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms