RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 GOLGA3Q08378 1498 aa25.62■■□□□ 1.69
CTTN-215ENST00000533931 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
CTTN-215ENST00000533931 IQGAP2Q13576 1575 aa25.55■■□□□ 1.68
CTTN-215ENST00000533931 CTTNBP2Q8WZ74 1663 aa25.54■■□□□ 1.68
CTTN-215ENST00000533931 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
CTTN-215ENST00000533931 UGGT2Q9NYU1 1516 aa25.47■■□□□ 1.67
CTTN-215ENST00000533931 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
CTTN-215ENST00000533931 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
CTTN-215ENST00000533931 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
CTTN-215ENST00000533931 CARMIL2Q6F5E8 1435 aa25.37■■□□□ 1.65
CTTN-215ENST00000533931 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
CTTN-215ENST00000533931 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
CTTN-215ENST00000533931 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
CTTN-215ENST00000533931 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
CTTN-215ENST00000533931 DISP1Q96F81 1524 aa25.32■■□□□ 1.64
CTTN-215ENST00000533931 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
CTTN-215ENST00000533931 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
CTTN-215ENST00000533931 SAMD9Q5K651 1589 aa25.29■■□□□ 1.64
CTTN-215ENST00000533931 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
CTTN-215ENST00000533931 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
CTTN-215ENST00000533931 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
CTTN-215ENST00000533931 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
CTTN-215ENST00000533931 PTPRGP23470 1445 aa25.17■■□□□ 1.62
CTTN-215ENST00000533931 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
CTTN-215ENST00000533931 CLIP1P30622 1438 aa25.14■■□□□ 1.62
CTTN-215ENST00000533931 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
CTTN-215ENST00000533931 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
CTTN-215ENST00000533931 RANGAP1P46060 587 aaPredicted RBP25.06■■□□□ 1.6
CTTN-215ENST00000533931 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
CTTN-215ENST00000533931 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
CTTN-215ENST00000533931 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
CTTN-215ENST00000533931 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
CTTN-215ENST00000533931 UACAQ9BZF9 1416 aa25.03■■□□□ 1.6
CTTN-215ENST00000533931 ABCA8O94911 1581 aa25.01■■□□□ 1.59
CTTN-215ENST00000533931 ABCC2Q92887 1545 aa25■■□□□ 1.59
CTTN-215ENST00000533931 ADCY10Q96PN6 1610 aa24.96■■□□□ 1.59
CTTN-215ENST00000533931 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
CTTN-215ENST00000533931 RAPGEF6Q8TEU7 1601 aa24.93■■□□□ 1.58
CTTN-215ENST00000533931 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
CTTN-215ENST00000533931 KDM5BQ9UGL1 1544 aa24.9■■□□□ 1.58
CTTN-215ENST00000533931 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
CTTN-215ENST00000533931 NUP153P49790 1475 aaKnown RBP24.85■■□□□ 1.57
CTTN-215ENST00000533931 FYCO1Q9BQS8 1478 aa24.85■■□□□ 1.57
CTTN-215ENST00000533931 HECW1Q76N89 1606 aa24.85■■□□□ 1.57
CTTN-215ENST00000533931 NPM1P06748 294 aaKnown RBP eCLIP24.84■■□□□ 1.57
CTTN-215ENST00000533931 VPS8Q8N3P4 1428 aa24.83■■□□□ 1.57
CTTN-215ENST00000533931 MAPKBP1O60336 1514 aa24.81■■□□□ 1.56
CTTN-215ENST00000533931 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
CTTN-215ENST00000533931 ATP10BO94823 1461 aa24.77■■□□□ 1.56
CTTN-215ENST00000533931 ZCCHC11Q5TAX3 1644 aaKnown RBP24.77■■□□□ 1.56
CTTN-215ENST00000533931 CCDC18Q5T9S5 1454 aa24.76■■□□□ 1.55
CTTN-215ENST00000533931 EPRSP07814 1512 aaKnown RBP24.75■■□□□ 1.55
CTTN-215ENST00000533931 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
CTTN-215ENST00000533931 WDR7Q9Y4E6 1490 aa24.66■■□□□ 1.54
CTTN-215ENST00000533931 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
CTTN-215ENST00000533931 CDK13Q14004 1512 aaKnown RBP24.65■■□□□ 1.54
CTTN-215ENST00000533931 ATP1B4Q9UN42 357 aaPredicted RBP24.64■■□□□ 1.54
CTTN-215ENST00000533931 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.54
CTTN-215ENST00000533931 LRRIQ1Q96JM4 1722 aa24.62■■□□□ 1.53
CTTN-215ENST00000533931 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
CTTN-215ENST00000533931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.6■■□□□ 1.53
CTTN-215ENST00000533931 HNRNPUL2Q1KMD3 747 aaKnown RBP24.6■■□□□ 1.53
CTTN-215ENST00000533931 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
CTTN-215ENST00000533931 ARID3CA6NKF2 412 aa24.58■■□□□ 1.53
CTTN-215ENST00000533931 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
CTTN-215ENST00000533931 GLI2P10070 1586 aa24.56■■□□□ 1.52
CTTN-215ENST00000533931 TIAM1Q13009 1591 aa24.55■■□□□ 1.52
CTTN-215ENST00000533931 DIP2BQ9P265 1576 aa24.55■■□□□ 1.52
CTTN-215ENST00000533931 TROQ12816 1431 aaPredicted RBP24.55■■□□□ 1.52
CTTN-215ENST00000533931 EHBP1L1Q8N3D4 1523 aa24.49■■□□□ 1.51
CTTN-215ENST00000533931 APLP2Q06481 763 aa24.48■■□□□ 1.51
CTTN-215ENST00000533931 MAGI3Q5TCQ9 1506 aa24.48■■□□□ 1.51
CTTN-215ENST00000533931 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
CTTN-215ENST00000533931 KIF14Q15058 1648 aa24.46■■□□□ 1.51
CTTN-215ENST00000533931 ABCA9Q8IUA7 1624 aa24.45■■□□□ 1.5
CTTN-215ENST00000533931 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.5
CTTN-215ENST00000533931 FAM69CQ0P6D2 419 aa24.44■■□□□ 1.5
CTTN-215ENST00000533931 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
CTTN-215ENST00000533931 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
CTTN-215ENST00000533931 MAP3K4Q9Y6R4 1608 aa24.41■■□□□ 1.5
CTTN-215ENST00000533931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.4■■□□□ 1.5
CTTN-215ENST00000533931 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
CTTN-215ENST00000533931 CD109Q6YHK3 1445 aa24.35■■□□□ 1.49
CTTN-215ENST00000533931 ARAP3Q8WWN8 1544 aa24.35■■□□□ 1.49
CTTN-215ENST00000533931 TTC37Q6PGP7 1564 aa24.34■■□□□ 1.49
CTTN-215ENST00000533931 SUPT6HQ7KZ85 1726 aaKnown RBP24.34■■□□□ 1.49
CTTN-215ENST00000533931 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
CTTN-215ENST00000533931 TEX14Q8IWB6 1497 aa24.32■■□□□ 1.48
CTTN-215ENST00000533931 PLCH2O75038 1416 aa24.3■■□□□ 1.48
CTTN-215ENST00000533931 NCOA2Q15596 1464 aa24.3■■□□□ 1.48
CTTN-215ENST00000533931 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
CTTN-215ENST00000533931 MYO5CQ9NQX4 1742 aa24.27■■□□□ 1.48
CTTN-215ENST00000533931 PPRC1Q5VV67 1664 aaKnown RBP24.25■■□□□ 1.47
CTTN-215ENST00000533931 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
CTTN-215ENST00000533931 NEO1Q92859 1461 aa24.25■■□□□ 1.47
CTTN-215ENST00000533931 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
CTTN-215ENST00000533931 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
CTTN-215ENST00000533931 CFAP74Q9C0B2 1584 aa24.24■■□□□ 1.47
CTTN-215ENST00000533931 ITSN2Q9NZM3 1697 aa24.22■■□□□ 1.47
CTTN-215ENST00000533931 FANCAO15360 1455 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms