RNA–Protein interactions for RNA: ENST00000533898.5

RCN1-211, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-211ENST00000533898 RAD54L2Q9Y4B4 1467 aa7.14□□□□□ -1.27
RCN1-211ENST00000533898 DNMBPQ6XZF7 1577 aa7.14□□□□□ -1.27
RCN1-211ENST00000533898 POLA1P09884 1462 aaPredicted RBP7.13□□□□□ -1.27
RCN1-211ENST00000533898 CFAP44Q96MT7 982 aa7.12□□□□□ -1.27
RCN1-211ENST00000533898 FGD5Q6ZNL6 1462 aa7.12□□□□□ -1.27
RCN1-211ENST00000533898 PAXIP1Q6ZW49 1069 aaPredicted RBP7.12□□□□□ -1.27
RCN1-211ENST00000533898 TARBP1Q13395 1621 aaKnown RBP7.1□□□□□ -1.27
RCN1-211ENST00000533898 TSHZ2Q9NRE2 1034 aa7.1□□□□□ -1.27
RCN1-211ENST00000533898 WRNQ14191 1432 aaPredicted RBP eCLIP7.09□□□□□ -1.27
RCN1-211ENST00000533898 VASPP50552 380 aaPredicted RBP7.09□□□□□ -1.27
RCN1-211ENST00000533898 AQRO60306 1485 aaKnown RBP eCLIP7.09□□□□□ -1.27
RCN1-211ENST00000533898 TDRD9Q8NDG6 1382 aaKnown RBP7.09□□□□□ -1.27
RCN1-211ENST00000533898 GTF3C3Q9Y5Q9 886 aa7.08□□□□□ -1.28
RCN1-211ENST00000533898 HOXD11P31277 338 aaPredicted RBP7.08□□□□□ -1.28
RCN1-211ENST00000533898 EIF4G3O43432 1585 aaKnown RBP7.07□□□□□ -1.28
RCN1-211ENST00000533898 TOP2BQ02880 1626 aa7.07□□□□□ -1.28
RCN1-211ENST00000533898 CACNB1Q02641 598 aaPredicted RBP7.07□□□□□ -1.28
RCN1-211ENST00000533898 SOGA1O94964 1423 aa7.07□□□□□ -1.28
RCN1-211ENST00000533898 BIVM-ERCC5R4GMW8 1640 aa7.06□□□□□ -1.28
RCN1-211ENST00000533898 IFT140Q96RY7 1462 aa7.06□□□□□ -1.28
RCN1-211ENST00000533898 WDR97A6NE52 1622 aa7.05□□□□□ -1.28
RCN1-211ENST00000533898 ARXQ96QS3 562 aa7.04□□□□□ -1.28
RCN1-211ENST00000533898 RUSC2Q8N2Y8 1516 aa7.02□□□□□ -1.29
RCN1-211ENST00000533898 ABCA10Q8WWZ4 1543 aa7.01□□□□□ -1.29
RCN1-211ENST00000533898 ABCA5Q8WWZ7 1642 aa7.01□□□□□ -1.29
RCN1-211ENST00000533898 SNAPC4Q5SXM2 1469 aa7□□□□□ -1.29
RCN1-211ENST00000533898 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
RCN1-211ENST00000533898 FBXO3Q9UK99 471 aa6.99□□□□□ -1.29
RCN1-211ENST00000533898 GAPVD1Q14C86 1478 aa6.99□□□□□ -1.29
RCN1-211ENST00000533898 PBRM1Q86U86 1689 aa6.98□□□□□ -1.29
RCN1-211ENST00000533898 CHD1O14646 1710 aa6.98□□□□□ -1.29
RCN1-211ENST00000533898 DMRT2Q9Y5R5 561 aa6.97□□□□□ -1.29
RCN1-211ENST00000533898 RGL2O15211 777 aa6.96□□□□□ -1.3
RCN1-211ENST00000533898 MKRN4PQ13434 485 aaPredicted RBP6.96□□□□□ -1.3
RCN1-211ENST00000533898 TRIM41Q8WV44 630 aa6.96□□□□□ -1.3
RCN1-211ENST00000533898 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.96□□□□□ -1.3
RCN1-211ENST00000533898 GRIN2BQ13224 1484 aa6.95□□□□□ -1.3
RCN1-211ENST00000533898 TMEM132AQ24JP5 1023 aa6.95□□□□□ -1.3
RCN1-211ENST00000533898 BBXQ8WY36 941 aaPredicted RBP6.95□□□□□ -1.3
RCN1-211ENST00000533898 ADAMTS12P58397 1594 aa6.94□□□□□ -1.3
RCN1-211ENST00000533898 IGF1RP08069 1367 aa6.93□□□□□ -1.3
RCN1-211ENST00000533898 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
RCN1-211ENST00000533898 ECM2O94769 699 aaPredicted RBP6.91□□□□□ -1.3
RCN1-211ENST00000533898 PROM2Q8N271 834 aa6.91□□□□□ -1.3
RCN1-211ENST00000533898 SYNJ2O15056 1496 aa6.91□□□□□ -1.3
RCN1-211ENST00000533898 MAGI1Q96QZ7 1491 aaPredicted RBP6.91□□□□□ -1.3
RCN1-211ENST00000533898 HOMEZQ8IX15 550 aa6.91□□□□□ -1.3
RCN1-211ENST00000533898 CEP170Q5SW79 1584 aa6.91□□□□□ -1.3
RCN1-211ENST00000533898 KIF27Q86VH2 1401 aa6.9□□□□□ -1.3
RCN1-211ENST00000533898 GRIN2AQ12879 1464 aa6.9□□□□□ -1.31
RCN1-211ENST00000533898 CHMP7Q8WUX9 453 aaPredicted RBP6.9□□□□□ -1.31
RCN1-211ENST00000533898 ERICH3Q5RHP9 1530 aa6.9□□□□□ -1.31
RCN1-211ENST00000533898 ERCC6L2Q5T890 1561 aa6.9□□□□□ -1.31
RCN1-211ENST00000533898 NBR1Q14596 966 aa6.89□□□□□ -1.31
RCN1-211ENST00000533898 OSCARQ8IYS5 282 aa6.89□□□□□ -1.31
RCN1-211ENST00000533898 C14orf37Q86TY3 774 aa6.88□□□□□ -1.31
RCN1-211ENST00000533898 CLASP1Q7Z460 1538 aa6.88□□□□□ -1.31
RCN1-211ENST00000533898 FHAD1B1AJZ9 1412 aa6.88□□□□□ -1.31
RCN1-211ENST00000533898 SPRYD3Q8NCJ5 442 aa6.88□□□□□ -1.31
RCN1-211ENST00000533898 U3KPZ7 1027 aaPredicted RBP6.88□□□□□ -1.31
RCN1-211ENST00000533898 ZNF219Q9P2Y4 722 aaPredicted RBP6.87□□□□□ -1.31
RCN1-211ENST00000533898 CARMIL1Q5VZK9 1371 aa6.86□□□□□ -1.31
RCN1-211ENST00000533898 RIMBP3CA6NJZ7 1639 aa6.86□□□□□ -1.31
RCN1-211ENST00000533898 RIMBP3BA6NNM3 1639 aa6.86□□□□□ -1.31
RCN1-211ENST00000533898 RIMBP3Q9UFD9 1639 aa6.86□□□□□ -1.31
RCN1-211ENST00000533898 NUP160Q12769 1436 aa6.85□□□□□ -1.31
RCN1-211ENST00000533898 ARHGEF11O15085 1522 aa6.85□□□□□ -1.31
RCN1-211ENST00000533898 RAPGEF2Q9Y4G8 1499 aa6.84□□□□□ -1.31
RCN1-211ENST00000533898 CUL7Q14999 1698 aa6.84□□□□□ -1.32
RCN1-211ENST00000533898 CHGAP10645 457 aaKnown RBP6.84□□□□□ -1.32
RCN1-211ENST00000533898 PODXL2Q9NZ53 605 aa6.84□□□□□ -1.32
RCN1-211ENST00000533898 ARAP1Q96P48 1450 aa6.83□□□□□ -1.32
RCN1-211ENST00000533898 PRXQ9BXM0 1461 aa6.83□□□□□ -1.32
RCN1-211ENST00000533898 DCAF8L1A6NGE4 600 aa6.82□□□□□ -1.32
RCN1-211ENST00000533898 TRHP20396 242 aaPredicted RBP6.82□□□□□ -1.32
RCN1-211ENST00000533898 RANGAP1P46060 587 aaPredicted RBP6.8□□□□□ -1.32
RCN1-211ENST00000533898 TTBK1Q5TCY1 1321 aaPredicted RBP6.8□□□□□ -1.32
RCN1-211ENST00000533898 CYB5RLQ6IPT4 315 aa6.8□□□□□ -1.32
RCN1-211ENST00000533898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.8□□□□□ -1.32
RCN1-211ENST00000533898 SHROOM2Q13796 1616 aa6.79□□□□□ -1.32
RCN1-211ENST00000533898 KLHL34Q8N239 644 aa6.79□□□□□ -1.32
RCN1-211ENST00000533898 PRG4Q92954 1404 aaPredicted RBP6.78□□□□□ -1.32
RCN1-211ENST00000533898 JPH4Q96JJ6 628 aa6.78□□□□□ -1.32
RCN1-211ENST00000533898 KIAA0586Q9BVV6 1533 aa6.77□□□□□ -1.33
RCN1-211ENST00000533898 IQGAP2Q13576 1575 aa6.77□□□□□ -1.33
RCN1-211ENST00000533898 DISP1Q96F81 1524 aa6.77□□□□□ -1.33
RCN1-211ENST00000533898 UBTFP17480 764 aaKnown RBP6.76□□□□□ -1.33
RCN1-211ENST00000533898 SAMD1Q6SPF0 538 aaPredicted RBP6.76□□□□□ -1.33
RCN1-211ENST00000533898 P3H3Q8IVL6 736 aa6.76□□□□□ -1.33
RCN1-211ENST00000533898 LOC105371045A0A1W2PR82 267 aa6.75□□□□□ -1.33
RCN1-211ENST00000533898 CTTNBP2Q8WZ74 1663 aa6.75□□□□□ -1.33
RCN1-211ENST00000533898 KIF21BO75037 1637 aa6.74□□□□□ -1.33
RCN1-211ENST00000533898 SPOCK2Q92563 424 aa6.74□□□□□ -1.33
RCN1-211ENST00000533898 EEA1Q15075 1411 aa6.74□□□□□ -1.33
RCN1-211ENST00000533898 NKX1-1Q15270 411 aaPredicted RBP6.72□□□□□ -1.33
RCN1-211ENST00000533898 KIAA0556O60303 1618 aa6.72□□□□□ -1.33
RCN1-211ENST00000533898 ARID3CA6NKF2 412 aa6.72□□□□□ -1.33
RCN1-211ENST00000533898 UGGT2Q9NYU1 1516 aa6.72□□□□□ -1.33
RCN1-211ENST00000533898 ADCY10Q96PN6 1610 aa6.71□□□□□ -1.33
RCN1-211ENST00000533898 FHOD3Q2V2M9 1422 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms