RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 SNAPC4Q5SXM2 1469 aa6.66□□□□□ -1.34
CTSC-208ENST00000533897 ARHGEF11O15085 1522 aa6.65□□□□□ -1.35
CTSC-208ENST00000533897 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.35
CTSC-208ENST00000533897 MIER1Q8N108 512 aa6.64□□□□□ -1.35
CTSC-208ENST00000533897 GTF3C3Q9Y5Q9 886 aa6.64□□□□□ -1.35
CTSC-208ENST00000533897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTSC-208ENST00000533897 FYCO1Q9BQS8 1478 aa6.64□□□□□ -1.35
CTSC-208ENST00000533897 CCNB3Q8WWL7 1395 aa6.63□□□□□ -1.35
CTSC-208ENST00000533897 THOC2Q8NI27 1593 aaKnown RBP6.63□□□□□ -1.35
CTSC-208ENST00000533897 TOPBP1Q92547 1522 aa6.62□□□□□ -1.35
CTSC-208ENST00000533897 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
CTSC-208ENST00000533897 POLA1P09884 1462 aaPredicted RBP6.61□□□□□ -1.35
CTSC-208ENST00000533897 PHLDB1Q86UU1 1377 aa6.61□□□□□ -1.35
CTSC-208ENST00000533897 TTBK1Q5TCY1 1321 aaPredicted RBP6.61□□□□□ -1.35
CTSC-208ENST00000533897 GCC2Q8IWJ2 1684 aa6.61□□□□□ -1.35
CTSC-208ENST00000533897 LAMC3Q9Y6N6 1575 aa6.6□□□□□ -1.35
CTSC-208ENST00000533897 FANCD2Q9BXW9 1451 aa6.6□□□□□ -1.35
CTSC-208ENST00000533897 CASKIN1Q8WXD9 1431 aa6.6□□□□□ -1.35
CTSC-208ENST00000533897 HNRNPUL2Q1KMD3 747 aaKnown RBP6.59□□□□□ -1.35
CTSC-208ENST00000533897 GRIN2BQ13224 1484 aa6.59□□□□□ -1.35
CTSC-208ENST00000533897 CENPBP07199 599 aaPredicted RBP6.59□□□□□ -1.35
CTSC-208ENST00000533897 URB2Q14146 1524 aaKnown RBP6.59□□□□□ -1.36
CTSC-208ENST00000533897 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.36
CTSC-208ENST00000533897 DENND4BO75064 1496 aaPredicted RBP6.58□□□□□ -1.36
CTSC-208ENST00000533897 PBRM1Q86U86 1689 aa6.58□□□□□ -1.36
CTSC-208ENST00000533897 PTPN23Q9H3S7 1636 aa6.58□□□□□ -1.36
CTSC-208ENST00000533897 CARMIL1Q5VZK9 1371 aa6.58□□□□□ -1.36
CTSC-208ENST00000533897 POLR1AO95602 1720 aaPredicted RBP6.58□□□□□ -1.36
CTSC-208ENST00000533897 MAGI3Q5TCQ9 1506 aa6.58□□□□□ -1.36
CTSC-208ENST00000533897 HECW1Q76N89 1606 aa6.57□□□□□ -1.36
CTSC-208ENST00000533897 FHAD1B1AJZ9 1412 aa6.57□□□□□ -1.36
CTSC-208ENST00000533897 SETD5Q9C0A6 1442 aa6.56□□□□□ -1.36
CTSC-208ENST00000533897 RAD54L2Q9Y4B4 1467 aa6.56□□□□□ -1.36
CTSC-208ENST00000533897 UGGT2Q9NYU1 1516 aa6.56□□□□□ -1.36
CTSC-208ENST00000533897 PTPRKQ15262 1439 aa6.55□□□□□ -1.36
CTSC-208ENST00000533897 TCOF1Q13428 1488 aaKnown RBP6.55□□□□□ -1.36
CTSC-208ENST00000533897 SUPT6HQ7KZ85 1726 aaKnown RBP6.54□□□□□ -1.36
CTSC-208ENST00000533897 NESP48681 1621 aa6.54□□□□□ -1.36
CTSC-208ENST00000533897 KDM6BO15054 1643 aa6.53□□□□□ -1.36
CTSC-208ENST00000533897 HFM1A2PYH4 1435 aa6.53□□□□□ -1.36
CTSC-208ENST00000533897 EHBP1L1Q8N3D4 1523 aa6.52□□□□□ -1.37
CTSC-208ENST00000533897 FGD6Q6ZV73 1430 aa6.52□□□□□ -1.37
CTSC-208ENST00000533897 FHOD3Q2V2M9 1422 aa6.52□□□□□ -1.37
CTSC-208ENST00000533897 ADAMTS12P58397 1594 aa6.52□□□□□ -1.37
CTSC-208ENST00000533897 AKNAQ7Z591 1439 aa6.5□□□□□ -1.37
CTSC-208ENST00000533897 PPP1R15AO75807 674 aaPredicted RBP6.5□□□□□ -1.37
CTSC-208ENST00000533897 WDR62O43379 1518 aa6.5□□□□□ -1.37
CTSC-208ENST00000533897 NAIPQ13075 1403 aa6.49□□□□□ -1.37
CTSC-208ENST00000533897 CROCC2H7BZ55 1655 aa6.49□□□□□ -1.37
CTSC-208ENST00000533897 TIMELESSQ9UNS1 1208 aa6.49□□□□□ -1.37
CTSC-208ENST00000533897 FMN1Q68DA7 1419 aa6.49□□□□□ -1.37
CTSC-208ENST00000533897 UACAQ9BZF9 1416 aa6.48□□□□□ -1.37
CTSC-208ENST00000533897 NCOA2Q15596 1464 aa6.48□□□□□ -1.37
CTSC-208ENST00000533897 ADCY10Q96PN6 1610 aa6.48□□□□□ -1.37
CTSC-208ENST00000533897 CCDC18Q5T9S5 1454 aa6.48□□□□□ -1.37
CTSC-208ENST00000533897 APLP2Q06481 763 aa6.48□□□□□ -1.37
CTSC-208ENST00000533897 SUPT16HQ9Y5B9 1047 aaKnown RBP6.48□□□□□ -1.37
CTSC-208ENST00000533897 MYOM3Q5VTT5 1437 aa6.47□□□□□ -1.37
CTSC-208ENST00000533897 DNMT1P26358 1616 aaKnown RBP6.46□□□□□ -1.37
CTSC-208ENST00000533897 GAPVD1Q14C86 1478 aa6.46□□□□□ -1.37
CTSC-208ENST00000533897 IQGAP2Q13576 1575 aa6.46□□□□□ -1.38
CTSC-208ENST00000533897 KCNH8Q96L42 1107 aa6.45□□□□□ -1.38
CTSC-208ENST00000533897 ADGBQ8N7X0 1667 aa6.45□□□□□ -1.38
CTSC-208ENST00000533897 KIAA0556O60303 1618 aa6.44□□□□□ -1.38
CTSC-208ENST00000533897 YTHDC1Q96MU7 727 aaKnown RBP6.43□□□□□ -1.38
CTSC-208ENST00000533897 EPRSP07814 1512 aaKnown RBP6.43□□□□□ -1.38
CTSC-208ENST00000533897 MBD5Q9P267 1494 aa6.43□□□□□ -1.38
CTSC-208ENST00000533897 DISP1Q96F81 1524 aa6.43□□□□□ -1.38
CTSC-208ENST00000533897 TEX14Q8IWB6 1497 aa6.43□□□□□ -1.38
CTSC-208ENST00000533897 RANGAP1P46060 587 aaPredicted RBP6.43□□□□□ -1.38
CTSC-208ENST00000533897 MIA2Q96PC5 1412 aa6.41□□□□□ -1.38
CTSC-208ENST00000533897 SIN3AQ96ST3 1273 aa6.41□□□□□ -1.38
CTSC-208ENST00000533897 CDC42BPAQ5VT25 1732 aa6.41□□□□□ -1.38
CTSC-208ENST00000533897 E9PCH4 1651 aa6.41□□□□□ -1.38
CTSC-208ENST00000533897 SPATA31E1Q6ZUB1 1445 aa6.4□□□□□ -1.38
CTSC-208ENST00000533897 RAPGEF6Q8TEU7 1601 aa6.4□□□□□ -1.38
CTSC-208ENST00000533897 TSHZ2Q9NRE2 1034 aa6.4□□□□□ -1.39
CTSC-208ENST00000533897 CDK13Q14004 1512 aaKnown RBP6.4□□□□□ -1.39
CTSC-208ENST00000533897 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
CTSC-208ENST00000533897 BCORL1Q5H9F3 1711 aa6.39□□□□□ -1.39
CTSC-208ENST00000533897 ITSN2Q9NZM3 1697 aa6.39□□□□□ -1.39
CTSC-208ENST00000533897 EIF4G3O43432 1585 aaKnown RBP6.39□□□□□ -1.39
CTSC-208ENST00000533897 NUP153P49790 1475 aaKnown RBP6.38□□□□□ -1.39
CTSC-208ENST00000533897 ROCK1Q13464 1354 aa6.38□□□□□ -1.39
CTSC-208ENST00000533897 PDS5BQ9NTI5 1447 aa6.38□□□□□ -1.39
CTSC-208ENST00000533897 MYT1Q01538 1121 aa6.38□□□□□ -1.39
CTSC-208ENST00000533897 ADGRL2O95490 1459 aa6.38□□□□□ -1.39
CTSC-208ENST00000533897 RPRD2Q5VT52 1461 aaKnown RBP6.38□□□□□ -1.39
CTSC-208ENST00000533897 KDM5DQ9BY66 1539 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 NCOA1Q15788 1441 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 CEP170Q5SW79 1584 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 TDRD9Q8NDG6 1382 aaKnown RBP6.37□□□□□ -1.39
CTSC-208ENST00000533897 KIF14Q15058 1648 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 KDM5CP41229 1560 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 PZPP20742 1482 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 MRC2Q9UBG0 1479 aa6.37□□□□□ -1.39
CTSC-208ENST00000533897 DAPK1P53355 1430 aa6.36□□□□□ -1.39
CTSC-208ENST00000533897 ABCC5O15440 1437 aa6.35□□□□□ -1.39
CTSC-208ENST00000533897 ABCA8O94911 1581 aa6.35□□□□□ -1.39
CTSC-208ENST00000533897 ANKRD30BQ9BXX2 1392 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms