RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 JPH4Q96JJ6 628 aa27.1■■□□□ 1.93
PACSIN3-210ENST00000533686 SHROOM2Q13796 1616 aa27.06■■□□□ 1.92
PACSIN3-210ENST00000533686 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
PACSIN3-210ENST00000533686 IQGAP2Q13576 1575 aa27.01■■□□□ 1.92
PACSIN3-210ENST00000533686 GOLGA3Q08378 1498 aa27■■□□□ 1.91
PACSIN3-210ENST00000533686 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
PACSIN3-210ENST00000533686 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
PACSIN3-210ENST00000533686 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
PACSIN3-210ENST00000533686 PRG4Q92954 1404 aaPredicted RBP26.98■■□□□ 1.91
PACSIN3-210ENST00000533686 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
PACSIN3-210ENST00000533686 UGGT2Q9NYU1 1516 aa26.92■■□□□ 1.9
PACSIN3-210ENST00000533686 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
PACSIN3-210ENST00000533686 ERCC6L2Q5T890 1561 aa26.9■■□□□ 1.9
PACSIN3-210ENST00000533686 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
PACSIN3-210ENST00000533686 CARMIL2Q6F5E8 1435 aa26.88■■□□□ 1.89
PACSIN3-210ENST00000533686 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
PACSIN3-210ENST00000533686 DISP1Q96F81 1524 aa26.83■■□□□ 1.89
PACSIN3-210ENST00000533686 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
PACSIN3-210ENST00000533686 TNIKQ9UKE5 1360 aa26.77■■□□□ 1.88
PACSIN3-210ENST00000533686 KIAA0556O60303 1618 aa26.75■■□□□ 1.87
PACSIN3-210ENST00000533686 PTPRGP23470 1445 aa26.73■■□□□ 1.87
PACSIN3-210ENST00000533686 SAMD9Q5K651 1589 aa26.69■■□□□ 1.86
PACSIN3-210ENST00000533686 RANGAP1P46060 587 aaPredicted RBP26.68■■□□□ 1.86
PACSIN3-210ENST00000533686 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
PACSIN3-210ENST00000533686 EFCAB5A4FU69 1503 aa26.65■■□□□ 1.86
PACSIN3-210ENST00000533686 P3H3Q8IVL6 736 aa26.63■■□□□ 1.85
PACSIN3-210ENST00000533686 TTBK1Q5TCY1 1321 aaPredicted RBP26.61■■□□□ 1.85
PACSIN3-210ENST00000533686 ARHGAP35Q9NRY4 1499 aa26.57■■□□□ 1.84
PACSIN3-210ENST00000533686 FHOD3Q2V2M9 1422 aa26.56■■□□□ 1.84
PACSIN3-210ENST00000533686 UACAQ9BZF9 1416 aa26.55■■□□□ 1.84
PACSIN3-210ENST00000533686 CLIP1P30622 1438 aa26.53■■□□□ 1.84
PACSIN3-210ENST00000533686 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
PACSIN3-210ENST00000533686 ADCY10Q96PN6 1610 aa26.48■■□□□ 1.83
PACSIN3-210ENST00000533686 CEP162Q5TB80 1403 aa26.48■■□□□ 1.83
PACSIN3-210ENST00000533686 ABCC2Q92887 1545 aa26.47■■□□□ 1.83
PACSIN3-210ENST00000533686 PLB1Q6P1J6 1458 aa26.47■■□□□ 1.83
PACSIN3-210ENST00000533686 ABCA8O94911 1581 aa26.46■■□□□ 1.83
PACSIN3-210ENST00000533686 NPM1P06748 294 aaKnown RBP eCLIP26.45■■□□□ 1.82
PACSIN3-210ENST00000533686 FMN1Q68DA7 1419 aa26.44■■□□□ 1.82
PACSIN3-210ENST00000533686 KDM5BQ9UGL1 1544 aa26.38■■□□□ 1.81
PACSIN3-210ENST00000533686 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
PACSIN3-210ENST00000533686 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
PACSIN3-210ENST00000533686 NUP153P49790 1475 aaKnown RBP26.3■■□□□ 1.8
PACSIN3-210ENST00000533686 ATP10BO94823 1461 aa26.27■■□□□ 1.8
PACSIN3-210ENST00000533686 CASKIN1Q8WXD9 1431 aa26.26■■□□□ 1.79
PACSIN3-210ENST00000533686 ZCCHC11Q5TAX3 1644 aaKnown RBP26.25■■□□□ 1.79
PACSIN3-210ENST00000533686 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
PACSIN3-210ENST00000533686 HECW1Q76N89 1606 aa26.21■■□□□ 1.79
PACSIN3-210ENST00000533686 ARID3CA6NKF2 412 aa26.21■■□□□ 1.79
PACSIN3-210ENST00000533686 ATP1B4Q9UN42 357 aaPredicted RBP26.2■■□□□ 1.78
PACSIN3-210ENST00000533686 FYCO1Q9BQS8 1478 aa26.19■■□□□ 1.78
PACSIN3-210ENST00000533686 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
PACSIN3-210ENST00000533686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.17■■□□□ 1.78
PACSIN3-210ENST00000533686 HNRNPUL2Q1KMD3 747 aaKnown RBP26.17■■□□□ 1.78
PACSIN3-210ENST00000533686 EPRSP07814 1512 aaKnown RBP26.17■■□□□ 1.78
PACSIN3-210ENST00000533686 VPS8Q8N3P4 1428 aa26.15■■□□□ 1.78
PACSIN3-210ENST00000533686 ABCC10Q5T3U5 1492 aa26.15■■□□□ 1.78
PACSIN3-210ENST00000533686 TRHP20396 242 aaPredicted RBP26.14■■□□□ 1.78
PACSIN3-210ENST00000533686 WDR7Q9Y4E6 1490 aa26.14■■□□□ 1.78
PACSIN3-210ENST00000533686 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
PACSIN3-210ENST00000533686 PLEKHD1A6NEE1 506 aa26.11■■□□□ 1.77
PACSIN3-210ENST00000533686 CDK13Q14004 1512 aaKnown RBP26.1■■□□□ 1.77
PACSIN3-210ENST00000533686 CDK11AQ9UQ88 783 aaPredicted RBP26.09■■□□□ 1.77
PACSIN3-210ENST00000533686 FAM69CQ0P6D2 419 aa26.08■■□□□ 1.77
PACSIN3-210ENST00000533686 DIP2BQ9P265 1576 aa26.06■■□□□ 1.76
PACSIN3-210ENST00000533686 GLI2P10070 1586 aa26.03■■□□□ 1.76
PACSIN3-210ENST00000533686 KCNH8Q96L42 1107 aa26.03■■□□□ 1.76
PACSIN3-210ENST00000533686 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
PACSIN3-210ENST00000533686 KIF13AQ9H1H9 1805 aa25.99■■□□□ 1.75
PACSIN3-210ENST00000533686 TROQ12816 1431 aaPredicted RBP25.97■■□□□ 1.75
PACSIN3-210ENST00000533686 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
PACSIN3-210ENST00000533686 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.74
PACSIN3-210ENST00000533686 ABCA9Q8IUA7 1624 aa25.88■■□□□ 1.73
PACSIN3-210ENST00000533686 MAP3K4Q9Y6R4 1608 aa25.88■■□□□ 1.73
PACSIN3-210ENST00000533686 CD109Q6YHK3 1445 aa25.88■■□□□ 1.73
PACSIN3-210ENST00000533686 TIAM1Q13009 1591 aa25.87■■□□□ 1.73
PACSIN3-210ENST00000533686 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
PACSIN3-210ENST00000533686 APLP2Q06481 763 aa25.86■■□□□ 1.73
PACSIN3-210ENST00000533686 CFAP43Q8NDM7 1665 aa25.86■■□□□ 1.73
PACSIN3-210ENST00000533686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.84■■□□□ 1.73
PACSIN3-210ENST00000533686 KIF14Q15058 1648 aa25.83■■□□□ 1.73
PACSIN3-210ENST00000533686 EHBP1L1Q8N3D4 1523 aa25.81■■□□□ 1.72
PACSIN3-210ENST00000533686 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
PACSIN3-210ENST00000533686 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
PACSIN3-210ENST00000533686 TTC37Q6PGP7 1564 aa25.77■■□□□ 1.72
PACSIN3-210ENST00000533686 KANK4Q5T7N3 995 aaPredicted RBP25.76■■□□□ 1.71
PACSIN3-210ENST00000533686 PPRC1Q5VV67 1664 aaKnown RBP25.76■■□□□ 1.71
PACSIN3-210ENST00000533686 TSPOAP1O95153 1857 aa25.75■■□□□ 1.71
PACSIN3-210ENST00000533686 PLCH2O75038 1416 aa25.74■■□□□ 1.71
PACSIN3-210ENST00000533686 ARAP3Q8WWN8 1544 aa25.7■■□□□ 1.7
PACSIN3-210ENST00000533686 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
PACSIN3-210ENST00000533686 NEO1Q92859 1461 aa25.67■■□□□ 1.7
PACSIN3-210ENST00000533686 CCNB3Q8WWL7 1395 aa25.67■■□□□ 1.7
PACSIN3-210ENST00000533686 NCOA2Q15596 1464 aa25.66■■□□□ 1.7
PACSIN3-210ENST00000533686 SUPT6HQ7KZ85 1726 aaKnown RBP25.66■■□□□ 1.7
PACSIN3-210ENST00000533686 EFCAB2Q5VUJ9 269 aa25.66■■□□□ 1.7
PACSIN3-210ENST00000533686 GPATCH8Q9UKJ3 1502 aaKnown RBP25.65■■□□□ 1.7
PACSIN3-210ENST00000533686 MYO5CQ9NQX4 1742 aa25.65■■□□□ 1.7
PACSIN3-210ENST00000533686 FANCAO15360 1455 aa25.65■■□□□ 1.7
PACSIN3-210ENST00000533686 AKNAQ7Z591 1439 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms