RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
CAPRIN1-215ENST00000533657 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
CAPRIN1-215ENST00000533657 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
CAPRIN1-215ENST00000533657 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
CAPRIN1-215ENST00000533657 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
CAPRIN1-215ENST00000533657 SAMD9Q5K651 1589 aa16.65■□□□□ 0.26
CAPRIN1-215ENST00000533657 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
CAPRIN1-215ENST00000533657 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
CAPRIN1-215ENST00000533657 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
CAPRIN1-215ENST00000533657 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
CAPRIN1-215ENST00000533657 FBLN2P98095 1184 aa16.53■□□□□ 0.24
CAPRIN1-215ENST00000533657 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
CAPRIN1-215ENST00000533657 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.24
CAPRIN1-215ENST00000533657 CLIP1P30622 1438 aa16.52■□□□□ 0.23
CAPRIN1-215ENST00000533657 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
CAPRIN1-215ENST00000533657 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
CAPRIN1-215ENST00000533657 CARMIL2Q6F5E8 1435 aa16.47■□□□□ 0.23
CAPRIN1-215ENST00000533657 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
CAPRIN1-215ENST00000533657 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
CAPRIN1-215ENST00000533657 FMN1Q68DA7 1419 aa16.39■□□□□ 0.21
CAPRIN1-215ENST00000533657 ERCC6L2Q5T890 1561 aa16.39■□□□□ 0.21
CAPRIN1-215ENST00000533657 MYT1Q01538 1121 aa16.38■□□□□ 0.21
CAPRIN1-215ENST00000533657 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
CAPRIN1-215ENST00000533657 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
CAPRIN1-215ENST00000533657 ABCA8O94911 1581 aa16.36■□□□□ 0.21
CAPRIN1-215ENST00000533657 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
CAPRIN1-215ENST00000533657 FYCO1Q9BQS8 1478 aa16.36■□□□□ 0.21
CAPRIN1-215ENST00000533657 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
CAPRIN1-215ENST00000533657 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
CAPRIN1-215ENST00000533657 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
CAPRIN1-215ENST00000533657 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
CAPRIN1-215ENST00000533657 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
CAPRIN1-215ENST00000533657 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
CAPRIN1-215ENST00000533657 HECW1Q76N89 1606 aa16.33■□□□□ 0.21
CAPRIN1-215ENST00000533657 CASKIN1Q8WXD9 1431 aa16.33■□□□□ 0.21
CAPRIN1-215ENST00000533657 UHRF1BP1LA0JNW5 1464 aa16.32■□□□□ 0.2
CAPRIN1-215ENST00000533657 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
CAPRIN1-215ENST00000533657 CFAP43Q8NDM7 1665 aa16.31■□□□□ 0.2
CAPRIN1-215ENST00000533657 LRRIQ1Q96JM4 1722 aa16.28■□□□□ 0.2
CAPRIN1-215ENST00000533657 ABCC2Q92887 1545 aa16.28■□□□□ 0.2
CAPRIN1-215ENST00000533657 PTPRGP23470 1445 aa16.28■□□□□ 0.2
CAPRIN1-215ENST00000533657 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
CAPRIN1-215ENST00000533657 UACAQ9BZF9 1416 aa16.24■□□□□ 0.19
CAPRIN1-215ENST00000533657 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
CAPRIN1-215ENST00000533657 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
CAPRIN1-215ENST00000533657 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
CAPRIN1-215ENST00000533657 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
CAPRIN1-215ENST00000533657 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
CAPRIN1-215ENST00000533657 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
CAPRIN1-215ENST00000533657 EPRSP07814 1512 aaKnown RBP16.2■□□□□ 0.18
CAPRIN1-215ENST00000533657 KDM5BQ9UGL1 1544 aa16.2■□□□□ 0.18
CAPRIN1-215ENST00000533657 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
CAPRIN1-215ENST00000533657 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
CAPRIN1-215ENST00000533657 ATP10BO94823 1461 aa16.12■□□□□ 0.17
CAPRIN1-215ENST00000533657 CDK13Q14004 1512 aaKnown RBP16.1■□□□□ 0.17
CAPRIN1-215ENST00000533657 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
CAPRIN1-215ENST00000533657 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
CAPRIN1-215ENST00000533657 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
CAPRIN1-215ENST00000533657 MAGI3Q5TCQ9 1506 aa16.07■□□□□ 0.16
CAPRIN1-215ENST00000533657 SUPT6HQ7KZ85 1726 aaKnown RBP16.06■□□□□ 0.16
CAPRIN1-215ENST00000533657 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
CAPRIN1-215ENST00000533657 KIF14Q15058 1648 aa16.02■□□□□ 0.16
CAPRIN1-215ENST00000533657 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
CAPRIN1-215ENST00000533657 HRCP23327 699 aa16■□□□□ 0.15
CAPRIN1-215ENST00000533657 APLP2Q06481 763 aa16■□□□□ 0.15
CAPRIN1-215ENST00000533657 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
CAPRIN1-215ENST00000533657 GLI2P10070 1586 aa15.98■□□□□ 0.15
CAPRIN1-215ENST00000533657 ITSN2Q9NZM3 1697 aa15.98■□□□□ 0.15
CAPRIN1-215ENST00000533657 ABCA9Q8IUA7 1624 aa15.98■□□□□ 0.15
CAPRIN1-215ENST00000533657 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
CAPRIN1-215ENST00000533657 TTBK1Q5TCY1 1321 aaPredicted RBP15.97■□□□□ 0.15
CAPRIN1-215ENST00000533657 MTUS2Q5JR59 1369 aa15.96■□□□□ 0.15
CAPRIN1-215ENST00000533657 ASXL2Q76L83 1435 aa15.96■□□□□ 0.15
CAPRIN1-215ENST00000533657 ARAP3Q8WWN8 1544 aa15.95■□□□□ 0.14
CAPRIN1-215ENST00000533657 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
CAPRIN1-215ENST00000533657 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
CAPRIN1-215ENST00000533657 PREX2Q70Z35 1606 aa15.93■□□□□ 0.14
CAPRIN1-215ENST00000533657 CDC42BPAQ5VT25 1732 aa15.93■□□□□ 0.14
CAPRIN1-215ENST00000533657 MYO5CQ9NQX4 1742 aa15.93■□□□□ 0.14
CAPRIN1-215ENST00000533657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.93■□□□□ 0.14
CAPRIN1-215ENST00000533657 PLEKHD1A6NEE1 506 aa15.92■□□□□ 0.14
CAPRIN1-215ENST00000533657 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
CAPRIN1-215ENST00000533657 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
CAPRIN1-215ENST00000533657 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
CAPRIN1-215ENST00000533657 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
CAPRIN1-215ENST00000533657 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
CAPRIN1-215ENST00000533657 MAP3K4Q9Y6R4 1608 aa15.91■□□□□ 0.14
CAPRIN1-215ENST00000533657 MIA2Q96PC5 1412 aa15.88■□□□□ 0.13
CAPRIN1-215ENST00000533657 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
CAPRIN1-215ENST00000533657 KIF13AQ9H1H9 1805 aa15.88■□□□□ 0.13
CAPRIN1-215ENST00000533657 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
CAPRIN1-215ENST00000533657 CFAP74Q9C0B2 1584 aa15.87■□□□□ 0.13
CAPRIN1-215ENST00000533657 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
CAPRIN1-215ENST00000533657 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
CAPRIN1-215ENST00000533657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.85■□□□□ 0.13
CAPRIN1-215ENST00000533657 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
CAPRIN1-215ENST00000533657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
CAPRIN1-215ENST00000533657 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
CAPRIN1-215ENST00000533657 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
CAPRIN1-215ENST00000533657 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms