RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
SF3B2-214ENST00000533595 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
SF3B2-214ENST00000533595 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
SF3B2-214ENST00000533595 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
SF3B2-214ENST00000533595 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
SF3B2-214ENST00000533595 KIF21BO75037 1637 aa24.05■■□□□ 1.44
SF3B2-214ENST00000533595 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
SF3B2-214ENST00000533595 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
SF3B2-214ENST00000533595 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
SF3B2-214ENST00000533595 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
SF3B2-214ENST00000533595 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
SF3B2-214ENST00000533595 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SF3B2-214ENST00000533595 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
SF3B2-214ENST00000533595 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
SF3B2-214ENST00000533595 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
SF3B2-214ENST00000533595 CARMIL2Q6F5E8 1435 aa23.89■■□□□ 1.41
SF3B2-214ENST00000533595 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
SF3B2-214ENST00000533595 DISP1Q96F81 1524 aa23.84■■□□□ 1.41
SF3B2-214ENST00000533595 KIAA0556O60303 1618 aa23.79■■□□□ 1.4
SF3B2-214ENST00000533595 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
SF3B2-214ENST00000533595 PTPRGP23470 1445 aa23.76■■□□□ 1.39
SF3B2-214ENST00000533595 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
SF3B2-214ENST00000533595 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
SF3B2-214ENST00000533595 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
SF3B2-214ENST00000533595 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
SF3B2-214ENST00000533595 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
SF3B2-214ENST00000533595 LOC105371045A0A1W2PR82 267 aa23.62■■□□□ 1.37
SF3B2-214ENST00000533595 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
SF3B2-214ENST00000533595 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
SF3B2-214ENST00000533595 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
SF3B2-214ENST00000533595 ARHGAP35Q9NRY4 1499 aa23.57■■□□□ 1.36
SF3B2-214ENST00000533595 UHRF1BP1LA0JNW5 1464 aa23.56■■□□□ 1.36
SF3B2-214ENST00000533595 PLB1Q6P1J6 1458 aa23.55■■□□□ 1.36
SF3B2-214ENST00000533595 ABCC2Q92887 1545 aa23.54■■□□□ 1.36
SF3B2-214ENST00000533595 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
SF3B2-214ENST00000533595 CLIP1P30622 1438 aa23.52■■□□□ 1.36
SF3B2-214ENST00000533595 ABCA8O94911 1581 aa23.52■■□□□ 1.36
SF3B2-214ENST00000533595 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
SF3B2-214ENST00000533595 FMN1Q68DA7 1419 aa23.45■■□□□ 1.34
SF3B2-214ENST00000533595 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
SF3B2-214ENST00000533595 KDM5BQ9UGL1 1544 aa23.44■■□□□ 1.34
SF3B2-214ENST00000533595 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
SF3B2-214ENST00000533595 ZCCHC11Q5TAX3 1644 aaKnown RBP23.38■■□□□ 1.33
SF3B2-214ENST00000533595 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
SF3B2-214ENST00000533595 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
SF3B2-214ENST00000533595 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
SF3B2-214ENST00000533595 ASXL2Q76L83 1435 aa23.33■■□□□ 1.33
SF3B2-214ENST00000533595 ATP10BO94823 1461 aa23.33■■□□□ 1.33
SF3B2-214ENST00000533595 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
SF3B2-214ENST00000533595 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
SF3B2-214ENST00000533595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
SF3B2-214ENST00000533595 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
SF3B2-214ENST00000533595 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
SF3B2-214ENST00000533595 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
SF3B2-214ENST00000533595 PCF11O94913 1555 aaKnown RBP23.27■■□□□ 1.32
SF3B2-214ENST00000533595 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
SF3B2-214ENST00000533595 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
SF3B2-214ENST00000533595 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
SF3B2-214ENST00000533595 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
SF3B2-214ENST00000533595 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
SF3B2-214ENST00000533595 CDK13Q14004 1512 aaKnown RBP23.22■■□□□ 1.31
SF3B2-214ENST00000533595 KIF13AQ9H1H9 1805 aa23.21■■□□□ 1.31
SF3B2-214ENST00000533595 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
SF3B2-214ENST00000533595 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
SF3B2-214ENST00000533595 KCNH8Q96L42 1107 aa23.17■■□□□ 1.3
SF3B2-214ENST00000533595 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
SF3B2-214ENST00000533595 LRRIQ1Q96JM4 1722 aa23.16■■□□□ 1.3
SF3B2-214ENST00000533595 GLI2P10070 1586 aa23.15■■□□□ 1.3
SF3B2-214ENST00000533595 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
SF3B2-214ENST00000533595 MAP3K4Q9Y6R4 1608 aa23.05■■□□□ 1.28
SF3B2-214ENST00000533595 TROQ12816 1431 aaPredicted RBP23.05■■□□□ 1.28
SF3B2-214ENST00000533595 TSPOAP1O95153 1857 aa23.03■■□□□ 1.28
SF3B2-214ENST00000533595 CFAP43Q8NDM7 1665 aa23.03■■□□□ 1.28
SF3B2-214ENST00000533595 CD109Q6YHK3 1445 aa23.02■■□□□ 1.28
SF3B2-214ENST00000533595 ABCA9Q8IUA7 1624 aa23.02■■□□□ 1.28
SF3B2-214ENST00000533595 MAGI3Q5TCQ9 1506 aa23■■□□□ 1.27
SF3B2-214ENST00000533595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
SF3B2-214ENST00000533595 KIF14Q15058 1648 aa22.97■■□□□ 1.27
SF3B2-214ENST00000533595 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
SF3B2-214ENST00000533595 PPRC1Q5VV67 1664 aaKnown RBP22.97■■□□□ 1.27
SF3B2-214ENST00000533595 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
SF3B2-214ENST00000533595 TEX14Q8IWB6 1497 aa22.95■■□□□ 1.26
SF3B2-214ENST00000533595 TTC37Q6PGP7 1564 aa22.94■■□□□ 1.26
SF3B2-214ENST00000533595 MAP3K1Q13233 1512 aa22.93■■□□□ 1.26
SF3B2-214ENST00000533595 APLP2Q06481 763 aa22.93■■□□□ 1.26
SF3B2-214ENST00000533595 EHBP1L1Q8N3D4 1523 aa22.91■■□□□ 1.26
SF3B2-214ENST00000533595 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
SF3B2-214ENST00000533595 PLCH2O75038 1416 aa22.85■■□□□ 1.25
SF3B2-214ENST00000533595 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
SF3B2-214ENST00000533595 KANK4Q5T7N3 995 aaPredicted RBP22.84■■□□□ 1.25
SF3B2-214ENST00000533595 NEO1Q92859 1461 aa22.82■■□□□ 1.24
SF3B2-214ENST00000533595 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
SF3B2-214ENST00000533595 ARAP3Q8WWN8 1544 aa22.82■■□□□ 1.24
SF3B2-214ENST00000533595 FANCAO15360 1455 aa22.81■■□□□ 1.24
SF3B2-214ENST00000533595 KDM6BO15054 1643 aa22.81■■□□□ 1.24
SF3B2-214ENST00000533595 SUPT6HQ7KZ85 1726 aaKnown RBP22.8■■□□□ 1.24
SF3B2-214ENST00000533595 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
SF3B2-214ENST00000533595 EFCAB2Q5VUJ9 269 aa22.79■■□□□ 1.24
SF3B2-214ENST00000533595 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
SF3B2-214ENST00000533595 ARHGAP5Q13017 1502 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms