RNA–Protein interactions for RNA: ENST00000533575.5

LINC01493-202, Transcript of long intergenic non-protein coding RNA 1493, humanhuman

TSL 4 BASIC

Gene LINC01493, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01493-202ENST00000533575 DIEXFQ68CQ4 756 aaKnown RBP11.04□□□□□ -0.64
LINC01493-202ENST00000533575 CECR2Q9BXF3 1484 aa11.04□□□□□ -0.64
LINC01493-202ENST00000533575 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC01493-202ENST00000533575 CCER1Q8TC90 406 aaPredicted RBP11.03□□□□□ -0.64
LINC01493-202ENST00000533575 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
LINC01493-202ENST00000533575 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
LINC01493-202ENST00000533575 SMARCA2P51531 1590 aa11□□□□□ -0.65
LINC01493-202ENST00000533575 FKBP8Q14318 412 aa11□□□□□ -0.65
LINC01493-202ENST00000533575 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
LINC01493-202ENST00000533575 KIF21BO75037 1637 aa10.99□□□□□ -0.65
LINC01493-202ENST00000533575 FAM9AQ8IZU1 332 aaPredicted RBP10.99□□□□□ -0.65
LINC01493-202ENST00000533575 PROM2Q8N271 834 aa10.99□□□□□ -0.65
LINC01493-202ENST00000533575 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
LINC01493-202ENST00000533575 CLSPNQ9HAW4 1339 aa10.96□□□□□ -0.65
LINC01493-202ENST00000533575 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
LINC01493-202ENST00000533575 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
LINC01493-202ENST00000533575 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
LINC01493-202ENST00000533575 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
LINC01493-202ENST00000533575 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
LINC01493-202ENST00000533575 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
LINC01493-202ENST00000533575 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
LINC01493-202ENST00000533575 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
LINC01493-202ENST00000533575 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
LINC01493-202ENST00000533575 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
LINC01493-202ENST00000533575 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
LINC01493-202ENST00000533575 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
LINC01493-202ENST00000533575 CREBZFQ9NS37 354 aa10.8□□□□□ -0.68
LINC01493-202ENST00000533575 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
LINC01493-202ENST00000533575 SOGA1O94964 1423 aa10.79□□□□□ -0.68
LINC01493-202ENST00000533575 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
LINC01493-202ENST00000533575 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
LINC01493-202ENST00000533575 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
LINC01493-202ENST00000533575 HAX1O00165 279 aa10.73□□□□□ -0.69
LINC01493-202ENST00000533575 ERICH3Q5RHP9 1530 aa10.73□□□□□ -0.69
LINC01493-202ENST00000533575 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
LINC01493-202ENST00000533575 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
LINC01493-202ENST00000533575 CUX2O14529 1486 aa10.71□□□□□ -0.69
LINC01493-202ENST00000533575 CLIP1P30622 1438 aa10.71□□□□□ -0.69
LINC01493-202ENST00000533575 EVX2Q03828 476 aa10.71□□□□□ -0.69
LINC01493-202ENST00000533575 MIER1Q8N108 512 aa10.71□□□□□ -0.69
LINC01493-202ENST00000533575 TOP2BQ02880 1626 aa10.68□□□□□ -0.7
LINC01493-202ENST00000533575 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
LINC01493-202ENST00000533575 YTHDC1Q96MU7 727 aaKnown RBP10.66□□□□□ -0.7
LINC01493-202ENST00000533575 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
LINC01493-202ENST00000533575 DHX57Q6P158 1386 aaKnown RBP10.63□□□□□ -0.71
LINC01493-202ENST00000533575 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
LINC01493-202ENST00000533575 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
LINC01493-202ENST00000533575 UBTFP17480 764 aaKnown RBP10.61□□□□□ -0.71
LINC01493-202ENST00000533575 SUPT16HQ9Y5B9 1047 aaKnown RBP10.61□□□□□ -0.71
LINC01493-202ENST00000533575 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
LINC01493-202ENST00000533575 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
LINC01493-202ENST00000533575 ARAP1Q96P48 1450 aa10.59□□□□□ -0.71
LINC01493-202ENST00000533575 RAPGEF2Q9Y4G8 1499 aa10.59□□□□□ -0.71
LINC01493-202ENST00000533575 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
LINC01493-202ENST00000533575 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
LINC01493-202ENST00000533575 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
LINC01493-202ENST00000533575 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
LINC01493-202ENST00000533575 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
LINC01493-202ENST00000533575 CFAP43Q8NDM7 1665 aa10.55□□□□□ -0.72
LINC01493-202ENST00000533575 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
LINC01493-202ENST00000533575 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01493-202ENST00000533575 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
LINC01493-202ENST00000533575 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
LINC01493-202ENST00000533575 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
LINC01493-202ENST00000533575 MAPKBP1O60336 1514 aa10.5□□□□□ -0.73
LINC01493-202ENST00000533575 TIAM1Q13009 1591 aa10.48□□□□□ -0.73
LINC01493-202ENST00000533575 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
LINC01493-202ENST00000533575 ATAD2BQ9ULI0 1458 aa10.47□□□□□ -0.73
LINC01493-202ENST00000533575 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
LINC01493-202ENST00000533575 CCNB3Q8WWL7 1395 aa10.43□□□□□ -0.74
LINC01493-202ENST00000533575 GABBR2O75899 941 aa10.43□□□□□ -0.74
LINC01493-202ENST00000533575 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
LINC01493-202ENST00000533575 BCL11AQ9H165 835 aa10.42□□□□□ -0.74
LINC01493-202ENST00000533575 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
LINC01493-202ENST00000533575 NUBP1P53384 320 aa10.41□□□□□ -0.74
LINC01493-202ENST00000533575 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
LINC01493-202ENST00000533575 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
LINC01493-202ENST00000533575 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
LINC01493-202ENST00000533575 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
LINC01493-202ENST00000533575 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
LINC01493-202ENST00000533575 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
LINC01493-202ENST00000533575 PHF12Q96QT6 1004 aa10.39□□□□□ -0.75
LINC01493-202ENST00000533575 CUX1P39880 1505 aa10.38□□□□□ -0.75
LINC01493-202ENST00000533575 KIF27Q86VH2 1401 aa10.37□□□□□ -0.75
LINC01493-202ENST00000533575 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
LINC01493-202ENST00000533575 CCDC61Q9Y6R9 512 aa10.36□□□□□ -0.75
LINC01493-202ENST00000533575 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
LINC01493-202ENST00000533575 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
LINC01493-202ENST00000533575 RAB3GAP2Q9H2M9 1393 aa10.35□□□□□ -0.75
LINC01493-202ENST00000533575 SETD5Q9C0A6 1442 aa10.34□□□□□ -0.75
LINC01493-202ENST00000533575 CCER2I3L3R5 266 aa10.34□□□□□ -0.75
LINC01493-202ENST00000533575 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
LINC01493-202ENST00000533575 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
LINC01493-202ENST00000533575 LRRC9Q6ZRR7 1453 aa10.33□□□□□ -0.76
LINC01493-202ENST00000533575 KIF21AQ7Z4S6 1674 aa10.32□□□□□ -0.76
LINC01493-202ENST00000533575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC01493-202ENST00000533575 NEFLP07196 543 aa10.32□□□□□ -0.76
LINC01493-202ENST00000533575 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
LINC01493-202ENST00000533575 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
LINC01493-202ENST00000533575 KANK4Q5T7N3 995 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms