RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 KIAA0586Q9BVV6 1533 aa35■■■■□ 3.19
VPS51-211ENST00000533487 PRXQ9BXM0 1461 aa34.99■■■■□ 3.19
VPS51-211ENST00000533487 CSRNP3Q8WYN3 585 aa34.97■■■■□ 3.19
VPS51-211ENST00000533487 JPH4Q96JJ6 628 aa34.86■■■■□ 3.17
VPS51-211ENST00000533487 IQGAP2Q13576 1575 aa34.82■■■■□ 3.16
VPS51-211ENST00000533487 CTTNBP2Q8WZ74 1663 aa34.79■■■■□ 3.16
VPS51-211ENST00000533487 ARAP1Q96P48 1450 aa34.79■■■■□ 3.16
VPS51-211ENST00000533487 PRG4Q92954 1404 aaPredicted RBP34.76■■■■□ 3.16
VPS51-211ENST00000533487 KIF21BO75037 1637 aa34.75■■■■□ 3.15
VPS51-211ENST00000533487 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
VPS51-211ENST00000533487 FAM9AQ8IZU1 332 aaPredicted RBP34.68■■■■□ 3.14
VPS51-211ENST00000533487 CYB5RLQ6IPT4 315 aa34.67■■■■□ 3.14
VPS51-211ENST00000533487 UGGT2Q9NYU1 1516 aa34.65■■■■□ 3.14
VPS51-211ENST00000533487 CARMIL2Q6F5E8 1435 aa34.64■■■■□ 3.14
VPS51-211ENST00000533487 GOLGA3Q08378 1498 aa34.52■■■■□ 3.12
VPS51-211ENST00000533487 DISP1Q96F81 1524 aa34.5■■■■□ 3.11
VPS51-211ENST00000533487 TNIKQ9UKE5 1360 aa34.47■■■■□ 3.11
VPS51-211ENST00000533487 KIAA0556O60303 1618 aa34.46■■■■□ 3.11
VPS51-211ENST00000533487 PTPRGP23470 1445 aa34.4■■■■□ 3.1
VPS51-211ENST00000533487 SAMD9Q5K651 1589 aa34.32■■■■□ 3.09
VPS51-211ENST00000533487 UBTFP17480 764 aaKnown RBP34.31■■■■□ 3.08
VPS51-211ENST00000533487 EFCAB5A4FU69 1503 aa34.27■■■■□ 3.08
VPS51-211ENST00000533487 UHRF1BP1LA0JNW5 1464 aa34.23■■■■□ 3.07
VPS51-211ENST00000533487 ADCY10Q96PN6 1610 aa34.22■■■■□ 3.07
VPS51-211ENST00000533487 UACAQ9BZF9 1416 aa34.2■■■■□ 3.06
VPS51-211ENST00000533487 ABCC2Q92887 1545 aa34.16■■■■□ 3.06
VPS51-211ENST00000533487 NPM1P06748 294 aaKnown RBP eCLIP34.16■■■■□ 3.06
VPS51-211ENST00000533487 TTBK1Q5TCY1 1321 aaPredicted RBP34.09■■■■□ 3.05
VPS51-211ENST00000533487 ABCA8O94911 1581 aa34.08■■■■□ 3.05
VPS51-211ENST00000533487 EHMT2Q96KQ7 1210 aa34.08■■■■□ 3.05
VPS51-211ENST00000533487 MAPKBP1O60336 1514 aa34.08■■■■□ 3.05
VPS51-211ENST00000533487 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
VPS51-211ENST00000533487 P3H3Q8IVL6 736 aa34.02■■■■□ 3.04
VPS51-211ENST00000533487 PLB1Q6P1J6 1458 aa34.01■■■■□ 3.04
VPS51-211ENST00000533487 RANGAP1P46060 587 aaPredicted RBP33.99■■■■□ 3.03
VPS51-211ENST00000533487 FHOD3Q2V2M9 1422 aa33.98■■■■□ 3.03
VPS51-211ENST00000533487 ARHGAP35Q9NRY4 1499 aa33.98■■■■□ 3.03
VPS51-211ENST00000533487 RAPGEF6Q8TEU7 1601 aa33.95■■■■□ 3.03
VPS51-211ENST00000533487 FMN1Q68DA7 1419 aa33.93■■■■□ 3.02
VPS51-211ENST00000533487 ZCCHC11Q5TAX3 1644 aaKnown RBP33.92■■■■□ 3.02
VPS51-211ENST00000533487 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
VPS51-211ENST00000533487 CLIP1P30622 1438 aa33.86■■■■□ 3.01
VPS51-211ENST00000533487 ABCC10Q5T3U5 1492 aa33.84■■■■□ 3.01
VPS51-211ENST00000533487 ASXL2Q76L83 1435 aa33.81■■■■□ 3
VPS51-211ENST00000533487 KIF13AQ9H1H9 1805 aa33.81■■■■□ 3
VPS51-211ENST00000533487 DIP2BQ9P265 1576 aa33.78■■■■□ 3
VPS51-211ENST00000533487 NUP153P49790 1475 aaKnown RBP33.76■■■■□ 3
VPS51-211ENST00000533487 ATP10BO94823 1461 aa33.76■■■□□ 2.99
VPS51-211ENST00000533487 HECW1Q76N89 1606 aa33.72■■■□□ 2.99
VPS51-211ENST00000533487 CEP162Q5TB80 1403 aa33.72■■■□□ 2.99
VPS51-211ENST00000533487 WDR7Q9Y4E6 1490 aa33.72■■■□□ 2.99
VPS51-211ENST00000533487 GLI2P10070 1586 aa33.72■■■□□ 2.99
VPS51-211ENST00000533487 LOC105371045A0A1W2PR82 267 aa33.69■■■□□ 2.98
VPS51-211ENST00000533487 FAM69CQ0P6D2 419 aa33.67■■■□□ 2.98
VPS51-211ENST00000533487 EPRSP07814 1512 aaKnown RBP33.64■■■□□ 2.98
VPS51-211ENST00000533487 CASKIN1Q8WXD9 1431 aa33.63■■■□□ 2.97
VPS51-211ENST00000533487 FYCO1Q9BQS8 1478 aa33.59■■■□□ 2.97
VPS51-211ENST00000533487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.56■■■□□ 2.96
VPS51-211ENST00000533487 HNRNPUL2Q1KMD3 747 aaKnown RBP33.56■■■□□ 2.96
VPS51-211ENST00000533487 PCF11O94913 1555 aaKnown RBP33.55■■■□□ 2.96
VPS51-211ENST00000533487 CCDC18Q5T9S5 1454 aa33.55■■■□□ 2.96
VPS51-211ENST00000533487 MAP3K4Q9Y6R4 1608 aa33.53■■■□□ 2.96
VPS51-211ENST00000533487 PLEKHD1A6NEE1 506 aa33.52■■■□□ 2.96
VPS51-211ENST00000533487 ARID3CA6NKF2 412 aa33.52■■■□□ 2.96
VPS51-211ENST00000533487 CFAP43Q8NDM7 1665 aa33.52■■■□□ 2.96
VPS51-211ENST00000533487 CDK11AQ9UQ88 783 aaPredicted RBP33.51■■■□□ 2.95
VPS51-211ENST00000533487 ATP1B4Q9UN42 357 aaPredicted RBP33.48■■■□□ 2.95
VPS51-211ENST00000533487 CDK13Q14004 1512 aaKnown RBP33.48■■■□□ 2.95
VPS51-211ENST00000533487 LRRIQ1Q96JM4 1722 aa33.46■■■□□ 2.95
VPS51-211ENST00000533487 ABCA9Q8IUA7 1624 aa33.43■■■□□ 2.94
VPS51-211ENST00000533487 KCNH8Q96L42 1107 aa33.43■■■□□ 2.94
VPS51-211ENST00000533487 TSPOAP1O95153 1857 aa33.43■■■□□ 2.94
VPS51-211ENST00000533487 TEX14Q8IWB6 1497 aa33.41■■■□□ 2.94
VPS51-211ENST00000533487 PPRC1Q5VV67 1664 aaKnown RBP33.38■■■□□ 2.93
VPS51-211ENST00000533487 CD109Q6YHK3 1445 aa33.37■■■□□ 2.93
VPS51-211ENST00000533487 MAGI3Q5TCQ9 1506 aa33.37■■■□□ 2.93
VPS51-211ENST00000533487 VPS8Q8N3P4 1428 aa33.36■■■□□ 2.93
VPS51-211ENST00000533487 TROQ12816 1431 aaPredicted RBP33.34■■■□□ 2.93
VPS51-211ENST00000533487 KIF14Q15058 1648 aa33.28■■■□□ 2.92
VPS51-211ENST00000533487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.26■■■□□ 2.91
VPS51-211ENST00000533487 PHLDB1Q86UU1 1377 aa33.24■■■□□ 2.91
VPS51-211ENST00000533487 KDM6BO15054 1643 aa33.2■■■□□ 2.91
VPS51-211ENST00000533487 MAP3K1Q13233 1512 aa33.18■■■□□ 2.9
VPS51-211ENST00000533487 TTC37Q6PGP7 1564 aa33.18■■■□□ 2.9
VPS51-211ENST00000533487 ARAP3Q8WWN8 1544 aa33.18■■■□□ 2.9
VPS51-211ENST00000533487 NEO1Q92859 1461 aa33.17■■■□□ 2.9
VPS51-211ENST00000533487 CFAP74Q9C0B2 1584 aa33.17■■■□□ 2.9
VPS51-211ENST00000533487 MYO5CQ9NQX4 1742 aa33.15■■■□□ 2.9
VPS51-211ENST00000533487 TIAM1Q13009 1591 aa33.13■■■□□ 2.89
VPS51-211ENST00000533487 EHBP1L1Q8N3D4 1523 aa33.12■■■□□ 2.89
VPS51-211ENST00000533487 MTUS2Q5JR59 1369 aa33.12■■■□□ 2.89
VPS51-211ENST00000533487 PLCH2O75038 1416 aa33.11■■■□□ 2.89
VPS51-211ENST00000533487 FANCAO15360 1455 aa33.05■■■□□ 2.88
VPS51-211ENST00000533487 PREX2Q70Z35 1606 aa33■■■□□ 2.87
VPS51-211ENST00000533487 APLP2Q06481 763 aa33■■■□□ 2.87
VPS51-211ENST00000533487 EFCAB2Q5VUJ9 269 aa32.98■■■□□ 2.87
VPS51-211ENST00000533487 SUPT6HQ7KZ85 1726 aaKnown RBP32.98■■■□□ 2.87
VPS51-211ENST00000533487 CDC42BPAQ5VT25 1732 aa32.97■■■□□ 2.87
VPS51-211ENST00000533487 AKNAQ7Z591 1439 aa32.97■■■□□ 2.87
VPS51-211ENST00000533487 COL17A1Q9UMD9 1497 aaPredicted RBP32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms