RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-215	ENST00000533408	CLASP1	Q7Z460	1538 aa		34.21	■■■■□ 3.07
PTP4A2-215	ENST00000533408	EHMT2	Q96KQ7	1210 aa		34.21	■■■■□ 3.07
PTP4A2-215	ENST00000533408	JPH4	Q96JJ6	628 aa		34.18	■■■■□ 3.06
PTP4A2-215	ENST00000533408	IQGAP2	Q13576	1575 aa		34.15	■■■■□ 3.06
PTP4A2-215	ENST00000533408	CTTNBP2	Q8WZ74	1663 aa		34.14	■■■■□ 3.06
PTP4A2-215	ENST00000533408	TNIK	Q9UKE5	1360 aa		34.11	■■■■□ 3.05
PTP4A2-215	ENST00000533408	LOC105371045	A0A1W2PR82	267 aa		34.05	■■■■□ 3.04
PTP4A2-215	ENST00000533408	CARMIL2	Q6F5E8	1435 aa		34.04	■■■■□ 3.04
PTP4A2-215	ENST00000533408	SHROOM2	Q13796	1616 aa		34.01	■■■■□ 3.03
PTP4A2-215	ENST00000533408	UGGT2	Q9NYU1	1516 aa		34	■■■■□ 3.03
PTP4A2-215	ENST00000533408	PRG4	Q92954	1404 aa	Predicted RBP	33.99	■■■■□ 3.03
PTP4A2-215	ENST00000533408	DNAJC5	Q9H3Z4	198 aa		33.99	■■■■□ 3.03
PTP4A2-215	ENST00000533408	RANGAP1	P46060	587 aa	Predicted RBP	33.89	■■■■□ 3.02
PTP4A2-215	ENST00000533408	EFCAB5	A4FU69	1503 aa		33.86	■■■■□ 3.01
PTP4A2-215	ENST00000533408	ARHGEF11	O15085	1522 aa		33.84	■■■■□ 3.01
PTP4A2-215	ENST00000533408	DISP1	Q96F81	1524 aa		33.82	■■■■□ 3
PTP4A2-215	ENST00000533408	CLIP1	P30622	1438 aa		33.79	■■■■□ 3
PTP4A2-215	ENST00000533408	KIAA0556	O60303	1618 aa		33.77	■■■■□ 3
PTP4A2-215	ENST00000533408	CEP162	Q5TB80	1403 aa		33.76	■■■□□ 2.99
PTP4A2-215	ENST00000533408	SAMD9	Q5K651	1589 aa		33.76	■■■□□ 2.99
PTP4A2-215	ENST00000533408	PTPRG	P23470	1445 aa		33.73	■■■□□ 2.99
PTP4A2-215	ENST00000533408	P3H3	Q8IVL6	736 aa		33.73	■■■□□ 2.99
PTP4A2-215	ENST00000533408	RIMBP3C	A6NJZ7	1639 aa		33.71	■■■□□ 2.99
PTP4A2-215	ENST00000533408	RIMBP3B	A6NNM3	1639 aa		33.71	■■■□□ 2.99
PTP4A2-215	ENST00000533408	RIMBP3	Q9UFD9	1639 aa		33.71	■■■□□ 2.99
PTP4A2-215	ENST00000533408	ERCC6L2	Q5T890	1561 aa		33.69	■■■□□ 2.98
PTP4A2-215	ENST00000533408	ARHGAP35	Q9NRY4	1499 aa		33.69	■■■□□ 2.98
PTP4A2-215	ENST00000533408	FMN1	Q68DA7	1419 aa		33.61	■■■□□ 2.97
PTP4A2-215	ENST00000533408	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.6	■■■□□ 2.97
PTP4A2-215	ENST00000533408	CYB5RL	Q6IPT4	315 aa		33.6	■■■□□ 2.97
PTP4A2-215	ENST00000533408	FHOD3	Q2V2M9	1422 aa		33.6	■■■□□ 2.97
PTP4A2-215	ENST00000533408	ARAP1	Q96P48	1450 aa		33.57	■■■□□ 2.97
PTP4A2-215	ENST00000533408	UACA	Q9BZF9	1416 aa		33.5	■■■□□ 2.95
PTP4A2-215	ENST00000533408	NPM1	P06748	294 aa	Known RBP eCLIP	33.43	■■■□□ 2.94
PTP4A2-215	ENST00000533408	UHRF1BP1L	A0JNW5	1464 aa		33.43	■■■□□ 2.94
PTP4A2-215	ENST00000533408	PLB1	Q6P1J6	1458 aa		33.38	■■■□□ 2.93
PTP4A2-215	ENST00000533408	ABCA8	O94911	1581 aa		33.37	■■■□□ 2.93
PTP4A2-215	ENST00000533408	ABCC2	Q92887	1545 aa		33.37	■■■□□ 2.93
PTP4A2-215	ENST00000533408	VPS8	Q8N3P4	1428 aa		33.35	■■■□□ 2.93
PTP4A2-215	ENST00000533408	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.34	■■■□□ 2.93
PTP4A2-215	ENST00000533408	RAPGEF6	Q8TEU7	1601 aa		33.34	■■■□□ 2.93
PTP4A2-215	ENST00000533408	CASKIN1	Q8WXD9	1431 aa		33.34	■■■□□ 2.93
PTP4A2-215	ENST00000533408	FYCO1	Q9BQS8	1478 aa		33.29	■■■□□ 2.92
PTP4A2-215	ENST00000533408	HECW1	Q76N89	1606 aa		33.25	■■■□□ 2.91
PTP4A2-215	ENST00000533408	ADCY10	Q96PN6	1610 aa		33.25	■■■□□ 2.91
PTP4A2-215	ENST00000533408	KDM5B	Q9UGL1	1544 aa		33.23	■■■□□ 2.91
PTP4A2-215	ENST00000533408	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.22	■■■□□ 2.91
PTP4A2-215	ENST00000533408	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.22	■■■□□ 2.91
PTP4A2-215	ENST00000533408	NUP153	P49790	1475 aa	Known RBP	33.21	■■■□□ 2.91
PTP4A2-215	ENST00000533408	APLP2	Q06481	763 aa		33.21	■■■□□ 2.91
PTP4A2-215	ENST00000533408	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.21	■■■□□ 2.91
PTP4A2-215	ENST00000533408	CCDC18	Q5T9S5	1454 aa		33.18	■■■□□ 2.9
PTP4A2-215	ENST00000533408	PCF11	O94913	1555 aa	Known RBP	33.18	■■■□□ 2.9
PTP4A2-215	ENST00000533408	ATP10B	O94823	1461 aa		33.15	■■■□□ 2.9
PTP4A2-215	ENST00000533408	EPRS	P07814	1512 aa	Known RBP	33.13	■■■□□ 2.89
PTP4A2-215	ENST00000533408	PLEKHD1	A6NEE1	506 aa		33.11	■■■□□ 2.89
PTP4A2-215	ENST00000533408	ARID3C	A6NKF2	412 aa		33.11	■■■□□ 2.89
PTP4A2-215	ENST00000533408	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.06	■■■□□ 2.88
PTP4A2-215	ENST00000533408	MAPKBP1	O60336	1514 aa		33.03	■■■□□ 2.88
PTP4A2-215	ENST00000533408	MAP3K1	Q13233	1512 aa		33.02	■■■□□ 2.88
PTP4A2-215	ENST00000533408	ASXL2	Q76L83	1435 aa		32.99	■■■□□ 2.87
PTP4A2-215	ENST00000533408	CDK13	Q14004	1512 aa	Known RBP	32.98	■■■□□ 2.87
PTP4A2-215	ENST00000533408	WDR7	Q9Y4E6	1490 aa		32.95	■■■□□ 2.87
PTP4A2-215	ENST00000533408	MTUS2	Q5JR59	1369 aa		32.92	■■■□□ 2.86
PTP4A2-215	ENST00000533408	TIAM1	Q13009	1591 aa		32.9	■■■□□ 2.86
PTP4A2-215	ENST00000533408	TRO	Q12816	1431 aa	Predicted RBP	32.89	■■■□□ 2.86
PTP4A2-215	ENST00000533408	KCNH8	Q96L42	1107 aa		32.87	■■■□□ 2.85
PTP4A2-215	ENST00000533408	LRRIQ1	Q96JM4	1722 aa		32.87	■■■□□ 2.85
PTP4A2-215	ENST00000533408	CFAP43	Q8NDM7	1665 aa		32.85	■■■□□ 2.85
PTP4A2-215	ENST00000533408	ABCC10	Q5T3U5	1492 aa		32.8	■■■□□ 2.84
PTP4A2-215	ENST00000533408	LRRC9	Q6ZRR7	1453 aa		32.8	■■■□□ 2.84
PTP4A2-215	ENST00000533408	EHBP1L1	Q8N3D4	1523 aa		32.79	■■■□□ 2.84
PTP4A2-215	ENST00000533408	FAM69C	Q0P6D2	419 aa		32.77	■■■□□ 2.84
PTP4A2-215	ENST00000533408	TRH	P20396	242 aa	Predicted RBP	32.75	■■■□□ 2.83
PTP4A2-215	ENST00000533408	KIF14	Q15058	1648 aa		32.73	■■■□□ 2.83
PTP4A2-215	ENST00000533408	KANK4	Q5T7N3	995 aa	Predicted RBP	32.73	■■■□□ 2.83
PTP4A2-215	ENST00000533408	GLI2	P10070	1586 aa		32.72	■■■□□ 2.83
PTP4A2-215	ENST00000533408	MAGI3	Q5TCQ9	1506 aa		32.7	■■■□□ 2.83
PTP4A2-215	ENST00000533408	DIP2B	Q9P265	1576 aa		32.67	■■■□□ 2.82
PTP4A2-215	ENST00000533408	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.63	■■■□□ 2.81
PTP4A2-215	ENST00000533408	CD109	Q6YHK3	1445 aa		32.62	■■■□□ 2.81
PTP4A2-215	ENST00000533408	ABCA9	Q8IUA7	1624 aa		32.62	■■■□□ 2.81
PTP4A2-215	ENST00000533408	CCNB3	Q8WWL7	1395 aa		32.61	■■■□□ 2.81
PTP4A2-215	ENST00000533408	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.61	■■■□□ 2.81	2e-21	■■□□□ 13.8
PTP4A2-215	ENST00000533408	NCOA2	Q15596	1464 aa		32.58	■■■□□ 2.81
PTP4A2-215	ENST00000533408	PLCH2	O75038	1416 aa		32.53	■■■□□ 2.8
PTP4A2-215	ENST00000533408	EFCAB2	Q5VUJ9	269 aa		32.52	■■■□□ 2.8
PTP4A2-215	ENST00000533408	MAP3K4	Q9Y6R4	1608 aa		32.51	■■■□□ 2.8
PTP4A2-215	ENST00000533408	KIF13A	Q9H1H9	1805 aa		32.51	■■■□□ 2.79
PTP4A2-215	ENST00000533408	TEX14	Q8IWB6	1497 aa		32.5	■■■□□ 2.79
PTP4A2-215	ENST00000533408	ARAP3	Q8WWN8	1544 aa		32.5	■■■□□ 2.79
PTP4A2-215	ENST00000533408	TTC37	Q6PGP7	1564 aa		32.49	■■■□□ 2.79
PTP4A2-215	ENST00000533408	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.49	■■■□□ 2.79
PTP4A2-215	ENST00000533408	PHLDB1	Q86UU1	1377 aa		32.48	■■■□□ 2.79
PTP4A2-215	ENST00000533408	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.48	■■■□□ 2.79
PTP4A2-215	ENST00000533408	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.46	■■■□□ 2.79
PTP4A2-215	ENST00000533408	MYO5C	Q9NQX4	1742 aa		32.44	■■■□□ 2.78
PTP4A2-215	ENST00000533408	MYOM3	Q5VTT5	1437 aa		32.43	■■■□□ 2.78
PTP4A2-215	ENST00000533408	ITSN2	Q9NZM3	1697 aa		32.42	■■■□□ 2.78
PTP4A2-215	ENST00000533408	MIA2	Q96PC5	1412 aa		32.42	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms