RNA–Protein interactions for RNA: ENST00000533332.1

SYT13-203, Transcript of synaptotagmin 13, humanhuman

TSL 1 (best)

Gene SYT13, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT13-203ENST00000533332 KIF21BO75037 1637 aa25.66■■□□□ 1.7
SYT13-203ENST00000533332 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
SYT13-203ENST00000533332 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
SYT13-203ENST00000533332 IQGAP2Q13576 1575 aa25.59■■□□□ 1.69
SYT13-203ENST00000533332 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
SYT13-203ENST00000533332 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
SYT13-203ENST00000533332 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
SYT13-203ENST00000533332 PRG4Q92954 1404 aaPredicted RBP25.56■■□□□ 1.68
SYT13-203ENST00000533332 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
SYT13-203ENST00000533332 CTTNBP2Q8WZ74 1663 aa25.53■■□□□ 1.68
SYT13-203ENST00000533332 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
SYT13-203ENST00000533332 UGGT2Q9NYU1 1516 aa25.49■■□□□ 1.67
SYT13-203ENST00000533332 CARMIL2Q6F5E8 1435 aa25.49■■□□□ 1.67
SYT13-203ENST00000533332 ERCC6L2Q5T890 1561 aa25.45■■□□□ 1.67
SYT13-203ENST00000533332 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
SYT13-203ENST00000533332 ARAP1Q96P48 1450 aa25.43■■□□□ 1.66
SYT13-203ENST00000533332 DISP1Q96F81 1524 aa25.4■■□□□ 1.66
SYT13-203ENST00000533332 EHMT2Q96KQ7 1210 aa25.4■■□□□ 1.66
SYT13-203ENST00000533332 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
SYT13-203ENST00000533332 PTPRGP23470 1445 aa25.32■■□□□ 1.64
SYT13-203ENST00000533332 KIAA0556O60303 1618 aa25.32■■□□□ 1.64
SYT13-203ENST00000533332 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
SYT13-203ENST00000533332 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
SYT13-203ENST00000533332 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
SYT13-203ENST00000533332 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
SYT13-203ENST00000533332 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
SYT13-203ENST00000533332 TTBK1Q5TCY1 1321 aaPredicted RBP25.19■■□□□ 1.62
SYT13-203ENST00000533332 UACAQ9BZF9 1416 aa25.16■■□□□ 1.62
SYT13-203ENST00000533332 ARHGAP35Q9NRY4 1499 aa25.14■■□□□ 1.62
SYT13-203ENST00000533332 UHRF1BP1LA0JNW5 1464 aa25.13■■□□□ 1.61
SYT13-203ENST00000533332 FHOD3Q2V2M9 1422 aa25.11■■□□□ 1.61
SYT13-203ENST00000533332 NPM1P06748 294 aaKnown RBP eCLIP25.11■■□□□ 1.61
SYT13-203ENST00000533332 CLIP1P30622 1438 aa25.1■■□□□ 1.61
SYT13-203ENST00000533332 ABCC2Q92887 1545 aa25.07■■□□□ 1.6
SYT13-203ENST00000533332 ADCY10Q96PN6 1610 aa25.07■■□□□ 1.6
SYT13-203ENST00000533332 PLB1Q6P1J6 1458 aa25.06■■□□□ 1.6
SYT13-203ENST00000533332 FMN1Q68DA7 1419 aa25.06■■□□□ 1.6
SYT13-203ENST00000533332 ABCA8O94911 1581 aa25.05■■□□□ 1.6
SYT13-203ENST00000533332 CEP162Q5TB80 1403 aa25.04■■□□□ 1.6
SYT13-203ENST00000533332 KDM5BQ9UGL1 1544 aa25■■□□□ 1.59
SYT13-203ENST00000533332 RAPGEF6Q8TEU7 1601 aa24.95■■□□□ 1.59
SYT13-203ENST00000533332 MAPKBP1O60336 1514 aa24.93■■□□□ 1.58
SYT13-203ENST00000533332 NUP153P49790 1475 aaKnown RBP24.89■■□□□ 1.58
SYT13-203ENST00000533332 ATP10BO94823 1461 aa24.89■■□□□ 1.57
SYT13-203ENST00000533332 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
SYT13-203ENST00000533332 ZCCHC11Q5TAX3 1644 aaKnown RBP24.86■■□□□ 1.57
SYT13-203ENST00000533332 ASXL2Q76L83 1435 aa24.84■■□□□ 1.57
SYT13-203ENST00000533332 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
SYT13-203ENST00000533332 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
SYT13-203ENST00000533332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
SYT13-203ENST00000533332 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
SYT13-203ENST00000533332 TRHP20396 242 aaPredicted RBP24.81■■□□□ 1.56
SYT13-203ENST00000533332 FYCO1Q9BQS8 1478 aa24.8■■□□□ 1.56
SYT13-203ENST00000533332 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
SYT13-203ENST00000533332 ABCC10Q5T3U5 1492 aa24.78■■□□□ 1.56
SYT13-203ENST00000533332 EPRSP07814 1512 aaKnown RBP24.78■■□□□ 1.56
SYT13-203ENST00000533332 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
SYT13-203ENST00000533332 CDK11AQ9UQ88 783 aaPredicted RBP24.77■■□□□ 1.56
SYT13-203ENST00000533332 WDR7Q9Y4E6 1490 aa24.76■■□□□ 1.55
SYT13-203ENST00000533332 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
SYT13-203ENST00000533332 PCF11O94913 1555 aaKnown RBP24.74■■□□□ 1.55
SYT13-203ENST00000533332 CCDC18Q5T9S5 1454 aa24.74■■□□□ 1.55
SYT13-203ENST00000533332 FAM69CQ0P6D2 419 aa24.73■■□□□ 1.55
SYT13-203ENST00000533332 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
SYT13-203ENST00000533332 CDK13Q14004 1512 aaKnown RBP24.69■■□□□ 1.54
SYT13-203ENST00000533332 DIP2BQ9P265 1576 aa24.68■■□□□ 1.54
SYT13-203ENST00000533332 KIF13AQ9H1H9 1805 aa24.68■■□□□ 1.54
SYT13-203ENST00000533332 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
SYT13-203ENST00000533332 GLI2P10070 1586 aa24.67■■□□□ 1.54
SYT13-203ENST00000533332 TROQ12816 1431 aaPredicted RBP24.59■■□□□ 1.53
SYT13-203ENST00000533332 MAP3K1Q13233 1512 aa24.56■■□□□ 1.52
SYT13-203ENST00000533332 APLP2Q06481 763 aa24.54■■□□□ 1.52
SYT13-203ENST00000533332 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
SYT13-203ENST00000533332 MAP3K4Q9Y6R4 1608 aa24.52■■□□□ 1.52
SYT13-203ENST00000533332 ABCA9Q8IUA7 1624 aa24.51■■□□□ 1.51
SYT13-203ENST00000533332 CFAP43Q8NDM7 1665 aa24.51■■□□□ 1.51
SYT13-203ENST00000533332 MTUS2Q5JR59 1369 aa24.5■■□□□ 1.51
SYT13-203ENST00000533332 TIAM1Q13009 1591 aa24.49■■□□□ 1.51
SYT13-203ENST00000533332 MAGI3Q5TCQ9 1506 aa24.48■■□□□ 1.51
SYT13-203ENST00000533332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.47■■□□□ 1.51
SYT13-203ENST00000533332 KIF14Q15058 1648 aa24.46■■□□□ 1.51
SYT13-203ENST00000533332 TEX14Q8IWB6 1497 aa24.46■■□□□ 1.51
SYT13-203ENST00000533332 TSPOAP1O95153 1857 aa24.43■■□□□ 1.5
SYT13-203ENST00000533332 PPRC1Q5VV67 1664 aaKnown RBP24.43■■□□□ 1.5
SYT13-203ENST00000533332 EHBP1L1Q8N3D4 1523 aa24.42■■□□□ 1.5
SYT13-203ENST00000533332 LRRC9Q6ZRR7 1453 aa24.42■■□□□ 1.5
SYT13-203ENST00000533332 PLCH2O75038 1416 aa24.4■■□□□ 1.5
SYT13-203ENST00000533332 PHLDB1Q86UU1 1377 aa24.4■■□□□ 1.5
SYT13-203ENST00000533332 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
SYT13-203ENST00000533332 TTC37Q6PGP7 1564 aa24.38■■□□□ 1.49
SYT13-203ENST00000533332 ARAP3Q8WWN8 1544 aa24.36■■□□□ 1.49
SYT13-203ENST00000533332 NEO1Q92859 1461 aa24.34■■□□□ 1.49
SYT13-203ENST00000533332 EFCAB2Q5VUJ9 269 aa24.33■■□□□ 1.49
SYT13-203ENST00000533332 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
SYT13-203ENST00000533332 FANCAO15360 1455 aa24.3■■□□□ 1.48
SYT13-203ENST00000533332 SUPT6HQ7KZ85 1726 aaKnown RBP24.3■■□□□ 1.48
SYT13-203ENST00000533332 MYO5CQ9NQX4 1742 aa24.29■■□□□ 1.48
SYT13-203ENST00000533332 GPATCH8Q9UKJ3 1502 aaKnown RBP24.29■■□□□ 1.48
SYT13-203ENST00000533332 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
SYT13-203ENST00000533332 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms