RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 SHROOM2Q13796 1616 aa13.08□□□□□ -0.32
COMMD9-207ENST00000533308 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
COMMD9-207ENST00000533308 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
COMMD9-207ENST00000533308 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
COMMD9-207ENST00000533308 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
COMMD9-207ENST00000533308 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
COMMD9-207ENST00000533308 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
COMMD9-207ENST00000533308 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
COMMD9-207ENST00000533308 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
COMMD9-207ENST00000533308 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
COMMD9-207ENST00000533308 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
COMMD9-207ENST00000533308 KIAA0556O60303 1618 aa12.97□□□□□ -0.33
COMMD9-207ENST00000533308 DISP1Q96F81 1524 aa12.97□□□□□ -0.33
COMMD9-207ENST00000533308 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.33
COMMD9-207ENST00000533308 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
COMMD9-207ENST00000533308 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
COMMD9-207ENST00000533308 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
COMMD9-207ENST00000533308 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
COMMD9-207ENST00000533308 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
COMMD9-207ENST00000533308 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
COMMD9-207ENST00000533308 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
COMMD9-207ENST00000533308 ARHGAP35Q9NRY4 1499 aa12.88□□□□□ -0.35
COMMD9-207ENST00000533308 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
COMMD9-207ENST00000533308 FHOD3Q2V2M9 1422 aa12.87□□□□□ -0.35
COMMD9-207ENST00000533308 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
COMMD9-207ENST00000533308 CARMIL2Q6F5E8 1435 aa12.86□□□□□ -0.35
COMMD9-207ENST00000533308 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-207ENST00000533308 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
COMMD9-207ENST00000533308 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
COMMD9-207ENST00000533308 CLIP1P30622 1438 aa12.82□□□□□ -0.36
COMMD9-207ENST00000533308 CYB5RLQ6IPT4 315 aa12.81□□□□□ -0.36
COMMD9-207ENST00000533308 PTPRGP23470 1445 aa12.8□□□□□ -0.36
COMMD9-207ENST00000533308 ABCA8O94911 1581 aa12.8□□□□□ -0.36
COMMD9-207ENST00000533308 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
COMMD9-207ENST00000533308 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.36
COMMD9-207ENST00000533308 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.36
COMMD9-207ENST00000533308 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
COMMD9-207ENST00000533308 LRRIQ1Q96JM4 1722 aa12.76□□□□□ -0.37
COMMD9-207ENST00000533308 UACAQ9BZF9 1416 aa12.74□□□□□ -0.37
COMMD9-207ENST00000533308 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
COMMD9-207ENST00000533308 UHRF1BP1LA0JNW5 1464 aa12.72□□□□□ -0.37
COMMD9-207ENST00000533308 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
COMMD9-207ENST00000533308 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
COMMD9-207ENST00000533308 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
COMMD9-207ENST00000533308 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
COMMD9-207ENST00000533308 CDK13Q14004 1512 aaKnown RBP12.69□□□□□ -0.38
COMMD9-207ENST00000533308 KDM5BQ9UGL1 1544 aa12.68□□□□□ -0.38
COMMD9-207ENST00000533308 CASKIN1Q8WXD9 1431 aa12.66□□□□□ -0.38
COMMD9-207ENST00000533308 ATP10BO94823 1461 aa12.65□□□□□ -0.38
COMMD9-207ENST00000533308 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
COMMD9-207ENST00000533308 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
COMMD9-207ENST00000533308 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
COMMD9-207ENST00000533308 EPRSP07814 1512 aaKnown RBP12.63□□□□□ -0.39
COMMD9-207ENST00000533308 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
COMMD9-207ENST00000533308 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
COMMD9-207ENST00000533308 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
COMMD9-207ENST00000533308 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
COMMD9-207ENST00000533308 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
COMMD9-207ENST00000533308 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
COMMD9-207ENST00000533308 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
COMMD9-207ENST00000533308 WDR7Q9Y4E6 1490 aa12.58□□□□□ -0.4
COMMD9-207ENST00000533308 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
COMMD9-207ENST00000533308 KIF14Q15058 1648 aa12.57□□□□□ -0.4
COMMD9-207ENST00000533308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
COMMD9-207ENST00000533308 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
COMMD9-207ENST00000533308 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
COMMD9-207ENST00000533308 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
COMMD9-207ENST00000533308 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
COMMD9-207ENST00000533308 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
COMMD9-207ENST00000533308 PPRC1Q5VV67 1664 aaKnown RBP12.51□□□□□ -0.41
COMMD9-207ENST00000533308 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
COMMD9-207ENST00000533308 TROQ12816 1431 aaPredicted RBP12.51□□□□□ -0.41
COMMD9-207ENST00000533308 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
COMMD9-207ENST00000533308 GLI2P10070 1586 aa12.51□□□□□ -0.41
COMMD9-207ENST00000533308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.41
COMMD9-207ENST00000533308 ABCA9Q8IUA7 1624 aa12.5□□□□□ -0.41
COMMD9-207ENST00000533308 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
COMMD9-207ENST00000533308 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
COMMD9-207ENST00000533308 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
COMMD9-207ENST00000533308 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
COMMD9-207ENST00000533308 FAM69CQ0P6D2 419 aa12.46□□□□□ -0.41
COMMD9-207ENST00000533308 KANK4Q5T7N3 995 aaPredicted RBP12.46□□□□□ -0.41
COMMD9-207ENST00000533308 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
COMMD9-207ENST00000533308 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
COMMD9-207ENST00000533308 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
COMMD9-207ENST00000533308 PLEKHD1A6NEE1 506 aa12.45□□□□□ -0.42
COMMD9-207ENST00000533308 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
COMMD9-207ENST00000533308 PREX2Q70Z35 1606 aa12.44□□□□□ -0.42
COMMD9-207ENST00000533308 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
COMMD9-207ENST00000533308 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
COMMD9-207ENST00000533308 CD109Q6YHK3 1445 aa12.41□□□□□ -0.42
COMMD9-207ENST00000533308 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
COMMD9-207ENST00000533308 CDK11AQ9UQ88 783 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-207ENST00000533308 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
COMMD9-207ENST00000533308 APLP2Q06481 763 aa12.38□□□□□ -0.43
COMMD9-207ENST00000533308 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
COMMD9-207ENST00000533308 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
COMMD9-207ENST00000533308 SAMD9LQ8IVG5 1584 aa12.36□□□□□ -0.43
COMMD9-207ENST00000533308 PLCH2O75038 1416 aa12.36□□□□□ -0.43
COMMD9-207ENST00000533308 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms