RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
SOX9-AS1-212ENST00000533232 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
SOX9-AS1-212ENST00000533232 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
SOX9-AS1-212ENST00000533232 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
SOX9-AS1-212ENST00000533232 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
SOX9-AS1-212ENST00000533232 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
SOX9-AS1-212ENST00000533232 ABCC8Q09428 1581 aa12.13□□□□□ -0.47
SOX9-AS1-212ENST00000533232 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
SOX9-AS1-212ENST00000533232 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
SOX9-AS1-212ENST00000533232 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
SOX9-AS1-212ENST00000533232 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
SOX9-AS1-212ENST00000533232 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
SOX9-AS1-212ENST00000533232 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
SOX9-AS1-212ENST00000533232 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
SOX9-AS1-212ENST00000533232 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
SOX9-AS1-212ENST00000533232 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
SOX9-AS1-212ENST00000533232 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
SOX9-AS1-212ENST00000533232 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
SOX9-AS1-212ENST00000533232 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
SOX9-AS1-212ENST00000533232 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
SOX9-AS1-212ENST00000533232 GOLGA3Q08378 1498 aa12.02□□□□□ -0.48
SOX9-AS1-212ENST00000533232 SOGA1O94964 1423 aa12.02□□□□□ -0.49
SOX9-AS1-212ENST00000533232 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
SOX9-AS1-212ENST00000533232 KIF21BO75037 1637 aa11.97□□□□□ -0.49
SOX9-AS1-212ENST00000533232 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
SOX9-AS1-212ENST00000533232 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
SOX9-AS1-212ENST00000533232 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
SOX9-AS1-212ENST00000533232 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
SOX9-AS1-212ENST00000533232 POTEMA6NI47 508 aa11.92□□□□□ -0.5
SOX9-AS1-212ENST00000533232 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
SOX9-AS1-212ENST00000533232 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
SOX9-AS1-212ENST00000533232 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
SOX9-AS1-212ENST00000533232 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
SOX9-AS1-212ENST00000533232 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
SOX9-AS1-212ENST00000533232 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
SOX9-AS1-212ENST00000533232 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
SOX9-AS1-212ENST00000533232 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
SOX9-AS1-212ENST00000533232 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
SOX9-AS1-212ENST00000533232 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
SOX9-AS1-212ENST00000533232 CLIP1P30622 1438 aa11.84□□□□□ -0.51
SOX9-AS1-212ENST00000533232 ZBTB22O15209 634 aa11.82□□□□□ -0.52
SOX9-AS1-212ENST00000533232 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
SOX9-AS1-212ENST00000533232 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
SOX9-AS1-212ENST00000533232 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
SOX9-AS1-212ENST00000533232 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
SOX9-AS1-212ENST00000533232 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
SOX9-AS1-212ENST00000533232 CFTRP13569 1480 aa11.74□□□□□ -0.53
SOX9-AS1-212ENST00000533232 PRDM2Q13029 1718 aa11.73□□□□□ -0.53
SOX9-AS1-212ENST00000533232 PRXQ9BXM0 1461 aa11.73□□□□□ -0.53
SOX9-AS1-212ENST00000533232 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
SOX9-AS1-212ENST00000533232 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
SOX9-AS1-212ENST00000533232 TTBK1Q5TCY1 1321 aaPredicted RBP11.71□□□□□ -0.54
SOX9-AS1-212ENST00000533232 CUX1P39880 1505 aa11.69□□□□□ -0.54
SOX9-AS1-212ENST00000533232 DIEXFQ68CQ4 756 aaKnown RBP11.66□□□□□ -0.54
SOX9-AS1-212ENST00000533232 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
SOX9-AS1-212ENST00000533232 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
SOX9-AS1-212ENST00000533232 CENPBP07199 599 aaPredicted RBP11.62□□□□□ -0.55
SOX9-AS1-212ENST00000533232 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
SOX9-AS1-212ENST00000533232 MAMSTRQ6ZN01 415 aa11.61□□□□□ -0.55
SOX9-AS1-212ENST00000533232 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
SOX9-AS1-212ENST00000533232 ARAP1Q96P48 1450 aa11.6□□□□□ -0.55
SOX9-AS1-212ENST00000533232 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
SOX9-AS1-212ENST00000533232 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
SOX9-AS1-212ENST00000533232 RANGAP1P46060 587 aaPredicted RBP11.55□□□□□ -0.56
SOX9-AS1-212ENST00000533232 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
SOX9-AS1-212ENST00000533232 CUX2O14529 1486 aa11.55□□□□□ -0.56
SOX9-AS1-212ENST00000533232 MAP3K1Q13233 1512 aa11.54□□□□□ -0.56
SOX9-AS1-212ENST00000533232 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-212ENST00000533232 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
SOX9-AS1-212ENST00000533232 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
SOX9-AS1-212ENST00000533232 C7P10643 843 aa11.52□□□□□ -0.56
SOX9-AS1-212ENST00000533232 IGF1RP08069 1367 aa11.52□□□□□ -0.57
SOX9-AS1-212ENST00000533232 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
SOX9-AS1-212ENST00000533232 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
SOX9-AS1-212ENST00000533232 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
SOX9-AS1-212ENST00000533232 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
SOX9-AS1-212ENST00000533232 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
SOX9-AS1-212ENST00000533232 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
SOX9-AS1-212ENST00000533232 FAM163AQ96GL9 167 aaPredicted RBP11.49□□□□□ -0.57
SOX9-AS1-212ENST00000533232 FHAD1B1AJZ9 1412 aa11.49□□□□□ -0.57
SOX9-AS1-212ENST00000533232 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
SOX9-AS1-212ENST00000533232 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
SOX9-AS1-212ENST00000533232 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
SOX9-AS1-212ENST00000533232 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
SOX9-AS1-212ENST00000533232 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
SOX9-AS1-212ENST00000533232 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
SOX9-AS1-212ENST00000533232 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.58
SOX9-AS1-212ENST00000533232 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
SOX9-AS1-212ENST00000533232 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
SOX9-AS1-212ENST00000533232 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
SOX9-AS1-212ENST00000533232 CUL7Q14999 1698 aa11.44□□□□□ -0.58
SOX9-AS1-212ENST00000533232 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
SOX9-AS1-212ENST00000533232 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
SOX9-AS1-212ENST00000533232 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
SOX9-AS1-212ENST00000533232 EFCAB5A4FU69 1503 aa11.43□□□□□ -0.58
SOX9-AS1-212ENST00000533232 ATMINO43313 823 aaPredicted RBP11.42□□□□□ -0.58
SOX9-AS1-212ENST00000533232 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
SOX9-AS1-212ENST00000533232 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
SOX9-AS1-212ENST00000533232 CFAP43Q8NDM7 1665 aa11.39□□□□□ -0.59
SOX9-AS1-212ENST00000533232 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms