RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 FBLN2P98095 1184 aa22.82■■□□□ 1.24
HIF3A-215ENST00000533145 NUP160Q12769 1436 aa22.81■■□□□ 1.24
HIF3A-215ENST00000533145 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
HIF3A-215ENST00000533145 KIAA0586Q9BVV6 1533 aa22.76■■□□□ 1.23
HIF3A-215ENST00000533145 IQGAP2Q13576 1575 aa22.7■■□□□ 1.22
HIF3A-215ENST00000533145 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
HIF3A-215ENST00000533145 CLASP1Q7Z460 1538 aa22.63■■□□□ 1.21
HIF3A-215ENST00000533145 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
HIF3A-215ENST00000533145 UGGT2Q9NYU1 1516 aa22.62■■□□□ 1.21
HIF3A-215ENST00000533145 CLIP1P30622 1438 aa22.59■■□□□ 1.21
HIF3A-215ENST00000533145 JPH4Q96JJ6 628 aa22.59■■□□□ 1.21
HIF3A-215ENST00000533145 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
HIF3A-215ENST00000533145 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
HIF3A-215ENST00000533145 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
HIF3A-215ENST00000533145 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
HIF3A-215ENST00000533145 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
HIF3A-215ENST00000533145 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
HIF3A-215ENST00000533145 CARMIL2Q6F5E8 1435 aa22.47■■□□□ 1.19
HIF3A-215ENST00000533145 KIAA0556O60303 1618 aa22.46■■□□□ 1.19
HIF3A-215ENST00000533145 PRG4Q92954 1404 aaPredicted RBP22.45■■□□□ 1.18
HIF3A-215ENST00000533145 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
HIF3A-215ENST00000533145 P3H3Q8IVL6 736 aa22.4■■□□□ 1.18
HIF3A-215ENST00000533145 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
HIF3A-215ENST00000533145 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
HIF3A-215ENST00000533145 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
HIF3A-215ENST00000533145 FMN1Q68DA7 1419 aa22.35■■□□□ 1.17
HIF3A-215ENST00000533145 PTPRGP23470 1445 aa22.28■■□□□ 1.16
HIF3A-215ENST00000533145 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
HIF3A-215ENST00000533145 ARHGEF11O15085 1522 aa22.24■■□□□ 1.15
HIF3A-215ENST00000533145 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
HIF3A-215ENST00000533145 ABCA8O94911 1581 aa22.21■■□□□ 1.15
HIF3A-215ENST00000533145 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
HIF3A-215ENST00000533145 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.14
HIF3A-215ENST00000533145 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
HIF3A-215ENST00000533145 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
HIF3A-215ENST00000533145 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
HIF3A-215ENST00000533145 PLB1Q6P1J6 1458 aa22.16■■□□□ 1.14
HIF3A-215ENST00000533145 HECW1Q76N89 1606 aa22.16■■□□□ 1.14
HIF3A-215ENST00000533145 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
HIF3A-215ENST00000533145 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
HIF3A-215ENST00000533145 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.14
HIF3A-215ENST00000533145 UHRF1BP1LA0JNW5 1464 aa22.14■■□□□ 1.13
HIF3A-215ENST00000533145 LRRIQ1Q96JM4 1722 aa22.12■■□□□ 1.13
HIF3A-215ENST00000533145 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
HIF3A-215ENST00000533145 ABCC2Q92887 1545 aa22.11■■□□□ 1.13
HIF3A-215ENST00000533145 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
HIF3A-215ENST00000533145 APLP2Q06481 763 aa22.08■■□□□ 1.13
HIF3A-215ENST00000533145 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
HIF3A-215ENST00000533145 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
HIF3A-215ENST00000533145 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
HIF3A-215ENST00000533145 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
HIF3A-215ENST00000533145 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
HIF3A-215ENST00000533145 TRHP20396 242 aaPredicted RBP22.04■■□□□ 1.12
HIF3A-215ENST00000533145 ADCY10Q96PN6 1610 aa22.03■■□□□ 1.12
HIF3A-215ENST00000533145 ATP10BO94823 1461 aa22.03■■□□□ 1.12
HIF3A-215ENST00000533145 KDM5BQ9UGL1 1544 aa22.01■■□□□ 1.11
HIF3A-215ENST00000533145 CDK13Q14004 1512 aaKnown RBP21.99■■□□□ 1.11
HIF3A-215ENST00000533145 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
HIF3A-215ENST00000533145 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
HIF3A-215ENST00000533145 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
HIF3A-215ENST00000533145 CDK11AQ9UQ88 783 aaPredicted RBP21.95■■□□□ 1.1
HIF3A-215ENST00000533145 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
HIF3A-215ENST00000533145 MAGI3Q5TCQ9 1506 aa21.9■■□□□ 1.1
HIF3A-215ENST00000533145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
HIF3A-215ENST00000533145 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
HIF3A-215ENST00000533145 PLEKHD1A6NEE1 506 aa21.89■■□□□ 1.09
HIF3A-215ENST00000533145 EHBP1L1Q8N3D4 1523 aa21.89■■□□□ 1.09
HIF3A-215ENST00000533145 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
HIF3A-215ENST00000533145 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
HIF3A-215ENST00000533145 TROQ12816 1431 aaPredicted RBP21.87■■□□□ 1.09
HIF3A-215ENST00000533145 PPARGC1BQ86YN6 1023 aaKnown RBP21.83■■□□□ 1.09
HIF3A-215ENST00000533145 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.08
HIF3A-215ENST00000533145 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
HIF3A-215ENST00000533145 MAPKBP1O60336 1514 aa21.8■■□□□ 1.08
HIF3A-215ENST00000533145 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
HIF3A-215ENST00000533145 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
HIF3A-215ENST00000533145 KIF14Q15058 1648 aa21.76■■□□□ 1.07
HIF3A-215ENST00000533145 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
HIF3A-215ENST00000533145 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
HIF3A-215ENST00000533145 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
HIF3A-215ENST00000533145 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
HIF3A-215ENST00000533145 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.68■■□□□ 1.06
HIF3A-215ENST00000533145 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
HIF3A-215ENST00000533145 ABCA9Q8IUA7 1624 aa21.66■■□□□ 1.06
HIF3A-215ENST00000533145 CDC42BPAQ5VT25 1732 aa21.65■■□□□ 1.06
HIF3A-215ENST00000533145 CCNB3Q8WWL7 1395 aa21.64■■□□□ 1.06
HIF3A-215ENST00000533145 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
HIF3A-215ENST00000533145 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
HIF3A-215ENST00000533145 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
HIF3A-215ENST00000533145 GLI2P10070 1586 aa21.63■■□□□ 1.05
HIF3A-215ENST00000533145 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
HIF3A-215ENST00000533145 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
HIF3A-215ENST00000533145 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
HIF3A-215ENST00000533145 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
HIF3A-215ENST00000533145 FGD6Q6ZV73 1430 aa21.6■■□□□ 1.05
HIF3A-215ENST00000533145 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
HIF3A-215ENST00000533145 ARAP3Q8WWN8 1544 aa21.59■■□□□ 1.05
HIF3A-215ENST00000533145 PREX2Q70Z35 1606 aa21.58■■□□□ 1.05
HIF3A-215ENST00000533145 PLCH2O75038 1416 aa21.58■■□□□ 1.05
HIF3A-215ENST00000533145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms