RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
NXF1-214ENST00000533048 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
NXF1-214ENST00000533048 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
NXF1-214ENST00000533048 IQGAP2Q13576 1575 aa23.86■■□□□ 1.41
NXF1-214ENST00000533048 FBLN2P98095 1184 aa23.84■■□□□ 1.41
NXF1-214ENST00000533048 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
NXF1-214ENST00000533048 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
NXF1-214ENST00000533048 CLIP1P30622 1438 aa23.77■■□□□ 1.4
NXF1-214ENST00000533048 EFCAB5A4FU69 1503 aa23.77■■□□□ 1.4
NXF1-214ENST00000533048 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
NXF1-214ENST00000533048 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
NXF1-214ENST00000533048 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
NXF1-214ENST00000533048 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
NXF1-214ENST00000533048 DISP1Q96F81 1524 aa23.64■■□□□ 1.37
NXF1-214ENST00000533048 KIAA0556O60303 1618 aa23.63■■□□□ 1.37
NXF1-214ENST00000533048 JPH4Q96JJ6 628 aa23.61■■□□□ 1.37
NXF1-214ENST00000533048 OSCARQ8IYS5 282 aa23.6■■□□□ 1.37
NXF1-214ENST00000533048 RANGAP1P46060 587 aaPredicted RBP23.57■■□□□ 1.36
NXF1-214ENST00000533048 CARMIL2Q6F5E8 1435 aa23.55■■□□□ 1.36
NXF1-214ENST00000533048 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
NXF1-214ENST00000533048 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
NXF1-214ENST00000533048 PRG4Q92954 1404 aaPredicted RBP23.53■■□□□ 1.36
NXF1-214ENST00000533048 FMN1Q68DA7 1419 aa23.49■■□□□ 1.35
NXF1-214ENST00000533048 ERCC6L2Q5T890 1561 aa23.45■■□□□ 1.34
NXF1-214ENST00000533048 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
NXF1-214ENST00000533048 PCF11O94913 1555 aaKnown RBP23.42■■□□□ 1.34
NXF1-214ENST00000533048 FYCO1Q9BQS8 1478 aa23.4■■□□□ 1.34
NXF1-214ENST00000533048 CASKIN1Q8WXD9 1431 aa23.4■■□□□ 1.34
NXF1-214ENST00000533048 PTPRGP23470 1445 aa23.33■■□□□ 1.33
NXF1-214ENST00000533048 ABCA8O94911 1581 aa23.33■■□□□ 1.33
NXF1-214ENST00000533048 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.32
NXF1-214ENST00000533048 HECW1Q76N89 1606 aa23.32■■□□□ 1.32
NXF1-214ENST00000533048 ARHGEF11O15085 1522 aa23.31■■□□□ 1.32
NXF1-214ENST00000533048 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
NXF1-214ENST00000533048 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
NXF1-214ENST00000533048 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
NXF1-214ENST00000533048 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
NXF1-214ENST00000533048 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
NXF1-214ENST00000533048 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
NXF1-214ENST00000533048 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
NXF1-214ENST00000533048 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
NXF1-214ENST00000533048 UHRF1BP1LA0JNW5 1464 aa23.23■■□□□ 1.31
NXF1-214ENST00000533048 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
NXF1-214ENST00000533048 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
NXF1-214ENST00000533048 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
NXF1-214ENST00000533048 ABCC2Q92887 1545 aa23.22■■□□□ 1.31
NXF1-214ENST00000533048 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
NXF1-214ENST00000533048 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
NXF1-214ENST00000533048 ADCY10Q96PN6 1610 aa23.14■■□□□ 1.29
NXF1-214ENST00000533048 APLP2Q06481 763 aa23.13■■□□□ 1.29
NXF1-214ENST00000533048 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
NXF1-214ENST00000533048 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
NXF1-214ENST00000533048 KDM5BQ9UGL1 1544 aa23.1■■□□□ 1.29
NXF1-214ENST00000533048 ATP10BO94823 1461 aa23.1■■□□□ 1.29
NXF1-214ENST00000533048 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
NXF1-214ENST00000533048 EHBP1L1Q8N3D4 1523 aa23.06■■□□□ 1.28
NXF1-214ENST00000533048 ZCCHC11Q5TAX3 1644 aaKnown RBP23.05■■□□□ 1.28
NXF1-214ENST00000533048 MAGI3Q5TCQ9 1506 aa23.05■■□□□ 1.28
NXF1-214ENST00000533048 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
NXF1-214ENST00000533048 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
NXF1-214ENST00000533048 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
NXF1-214ENST00000533048 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
NXF1-214ENST00000533048 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
NXF1-214ENST00000533048 SUPT6HQ7KZ85 1726 aaKnown RBP22.95■■□□□ 1.26
NXF1-214ENST00000533048 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
NXF1-214ENST00000533048 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
NXF1-214ENST00000533048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
NXF1-214ENST00000533048 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
NXF1-214ENST00000533048 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
NXF1-214ENST00000533048 NCOA2Q15596 1464 aa22.89■■□□□ 1.25
NXF1-214ENST00000533048 KIF14Q15058 1648 aa22.89■■□□□ 1.25
NXF1-214ENST00000533048 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
NXF1-214ENST00000533048 MAPKBP1O60336 1514 aa22.87■■□□□ 1.25
NXF1-214ENST00000533048 WDR7Q9Y4E6 1490 aa22.87■■□□□ 1.25
NXF1-214ENST00000533048 ASXL2Q76L83 1435 aa22.84■■□□□ 1.25
NXF1-214ENST00000533048 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
NXF1-214ENST00000533048 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.25
NXF1-214ENST00000533048 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
NXF1-214ENST00000533048 MYOM3Q5VTT5 1437 aa22.79■■□□□ 1.24
NXF1-214ENST00000533048 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
NXF1-214ENST00000533048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.77■■□□□ 1.24
NXF1-214ENST00000533048 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
NXF1-214ENST00000533048 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
NXF1-214ENST00000533048 ABCA9Q8IUA7 1624 aa22.75■■□□□ 1.23
NXF1-214ENST00000533048 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
NXF1-214ENST00000533048 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
NXF1-214ENST00000533048 MIA2Q96PC5 1412 aa22.73■■□□□ 1.23
NXF1-214ENST00000533048 GPATCH8Q9UKJ3 1502 aaKnown RBP22.72■■□□□ 1.23
NXF1-214ENST00000533048 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
NXF1-214ENST00000533048 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
NXF1-214ENST00000533048 CCNB3Q8WWL7 1395 aa22.72■■□□□ 1.23
NXF1-214ENST00000533048 MYO5CQ9NQX4 1742 aa22.7■■□□□ 1.22
NXF1-214ENST00000533048 ARAP3Q8WWN8 1544 aa22.69■■□□□ 1.22
NXF1-214ENST00000533048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.69■■□□□ 1.22
NXF1-214ENST00000533048 GLI2P10070 1586 aa22.68■■□□□ 1.22
NXF1-214ENST00000533048 TCOF1Q13428 1488 aaKnown RBP22.68■■□□□ 1.22
NXF1-214ENST00000533048 CDC42BPBQ9Y5S2 1711 aa22.66■■□□□ 1.22
NXF1-214ENST00000533048 PTPN23Q9H3S7 1636 aa22.66■■□□□ 1.22
NXF1-214ENST00000533048 DIP2BQ9P265 1576 aa22.65■■□□□ 1.22
NXF1-214ENST00000533048 KCNH8Q96L42 1107 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms