RNA–Protein interactions for RNA: ENST00000532993.5

ARHGEF12-213, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF12, Length 8,753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-213ENST00000532993 NBR1Q14596 966 aa8.03□□□□□ -1.12
ARHGEF12-213ENST00000532993 BIVM-ERCC5R4GMW8 1640 aa8.02□□□□□ -1.13
ARHGEF12-213ENST00000532993 CEP164Q9UPV0 1460 aa8.02□□□□□ -1.13
ARHGEF12-213ENST00000532993 CSRNP3Q8WYN3 585 aa8.02□□□□□ -1.13
ARHGEF12-213ENST00000532993 PPM1GO15355 546 aaPredicted RBP8.01□□□□□ -1.13
ARHGEF12-213ENST00000532993 ZNF777Q9ULD5 760 aaPredicted RBP8.01□□□□□ -1.13
ARHGEF12-213ENST00000532993 TOP2BQ02880 1626 aa8.01□□□□□ -1.13
ARHGEF12-213ENST00000532993 PTMSP20962 102 aa8□□□□□ -1.13
ARHGEF12-213ENST00000532993 GOLGA3Q08378 1498 aa8□□□□□ -1.13
ARHGEF12-213ENST00000532993 VPS8Q8N3P4 1428 aa7.99□□□□□ -1.13
ARHGEF12-213ENST00000532993 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
ARHGEF12-213ENST00000532993 CEP162Q5TB80 1403 aa7.97□□□□□ -1.13
ARHGEF12-213ENST00000532993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.97□□□□□ -1.13
ARHGEF12-213ENST00000532993 DDX10Q13206 875 aaKnown RBP7.95□□□□□ -1.14
ARHGEF12-213ENST00000532993 FAM9BQ8IZU0 186 aa7.95□□□□□ -1.14
ARHGEF12-213ENST00000532993 IRX6P78412 446 aaPredicted RBP7.94□□□□□ -1.14
ARHGEF12-213ENST00000532993 SYNJ1O43426 1573 aa7.94□□□□□ -1.14
ARHGEF12-213ENST00000532993 USP35Q9P2H5 1018 aa7.94□□□□□ -1.14
ARHGEF12-213ENST00000532993 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
ARHGEF12-213ENST00000532993 ZBTB47Q9UFB7 747 aaPredicted RBP7.93□□□□□ -1.14
ARHGEF12-213ENST00000532993 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
ARHGEF12-213ENST00000532993 UPF2Q9HAU5 1272 aaKnown RBP7.93□□□□□ -1.14
ARHGEF12-213ENST00000532993 SOGA1O94964 1423 aa7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 MIER1Q8N108 512 aa7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 LAS1LQ9Y4W2 734 aaKnown RBP7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 SALL2Q9Y467 1007 aaPredicted RBP7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 CDK11BP21127 795 aaKnown RBP7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 RSPH6AQ9H0K4 717 aa7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 HIRIP3Q9BW71 556 aaPredicted RBP7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 UNC13AQ9UPW8 1703 aa7.92□□□□□ -1.14
ARHGEF12-213ENST00000532993 CHIC2Q9UKJ5 165 aa7.91□□□□□ -1.14
ARHGEF12-213ENST00000532993 TONSLQ96HA7 1378 aa7.91□□□□□ -1.14
ARHGEF12-213ENST00000532993 RTN4Q9NQC3 1192 aaKnown RBP7.9□□□□□ -1.14
ARHGEF12-213ENST00000532993 CLIP1P30622 1438 aa7.9□□□□□ -1.14
ARHGEF12-213ENST00000532993 NEFMP07197 916 aa7.89□□□□□ -1.15
ARHGEF12-213ENST00000532993 AQRO60306 1485 aaKnown RBP eCLIP7.88□□□□□ -1.159e-7■■■■□ 21.5
ARHGEF12-213ENST00000532993 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
ARHGEF12-213ENST00000532993 L1TD1Q5T7N2 865 aaKnown RBP7.87□□□□□ -1.15
ARHGEF12-213ENST00000532993 ARXQ96QS3 562 aa7.86□□□□□ -1.15
ARHGEF12-213ENST00000532993 CHGAP10645 457 aaKnown RBP7.85□□□□□ -1.15
ARHGEF12-213ENST00000532993 BECN1Q14457 450 aa7.85□□□□□ -1.15
ARHGEF12-213ENST00000532993 RUSC2Q8N2Y8 1516 aa7.84□□□□□ -1.15
ARHGEF12-213ENST00000532993 MTERF4Q7Z6M4 381 aaKnown RBP7.84□□□□□ -1.15
ARHGEF12-213ENST00000532993 ABCC8Q09428 1581 aa7.83□□□□□ -1.16
ARHGEF12-213ENST00000532993 DEKP35659 375 aaKnown RBP7.83□□□□□ -1.16
ARHGEF12-213ENST00000532993 MRS2Q9HD23 443 aa7.82□□□□□ -1.16
ARHGEF12-213ENST00000532993 PLPPR3Q6T4P5 718 aa7.82□□□□□ -1.16
ARHGEF12-213ENST00000532993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.82□□□□□ -1.161e-6■■□□□ 14.3
ARHGEF12-213ENST00000532993 CCDC136Q96JN2 1154 aa7.82□□□□□ -1.16
ARHGEF12-213ENST00000532993 MAP7D2Q96T17 732 aa7.82□□□□□ -1.16
ARHGEF12-213ENST00000532993 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.81□□□□□ -1.16
ARHGEF12-213ENST00000532993 AKNAQ7Z591 1439 aa7.81□□□□□ -1.16
ARHGEF12-213ENST00000532993 SENP3Q9H4L4 574 aaPredicted RBP7.81□□□□□ -1.16
ARHGEF12-213ENST00000532993 GOLGA6L22H0YM25 854 aa7.81□□□□□ -1.16
ARHGEF12-213ENST00000532993 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
ARHGEF12-213ENST00000532993 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
ARHGEF12-213ENST00000532993 CUX1P39880 1505 aa7.8□□□□□ -1.16
ARHGEF12-213ENST00000532993 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
ARHGEF12-213ENST00000532993 CALRP27797 417 aaKnown RBP7.8□□□□□ -1.16
ARHGEF12-213ENST00000532993 ARAP1Q96P48 1450 aa7.79□□□□□ -1.16
ARHGEF12-213ENST00000532993 HMGB1P09429 215 aaKnown RBP7.79□□□□□ -1.16
ARHGEF12-213ENST00000532993 TIMELESSQ9UNS1 1208 aa7.79□□□□□ -1.16
ARHGEF12-213ENST00000532993 ARHGEF11O15085 1522 aa7.79□□□□□ -1.16
ARHGEF12-213ENST00000532993 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.79□□□□□ -1.16
ARHGEF12-213ENST00000532993 CADPSQ9ULU8 1353 aa7.78□□□□□ -1.16
ARHGEF12-213ENST00000532993 HSP90AA1P07900 732 aaKnown RBP7.78□□□□□ -1.16
ARHGEF12-213ENST00000532993 RRP7BPQ9NSQ0 103 aa7.78□□□□□ -1.16
ARHGEF12-213ENST00000532993 IGF1RP08069 1367 aa7.78□□□□□ -1.16
ARHGEF12-213ENST00000532993 RAPGEF2Q9Y4G8 1499 aa7.77□□□□□ -1.17
ARHGEF12-213ENST00000532993 NAP1L5Q96NT1 182 aaPredicted RBP7.77□□□□□ -1.17
ARHGEF12-213ENST00000532993 A0A0U1RQG5 324 aaPredicted RBP7.77□□□□□ -1.17
ARHGEF12-213ENST00000532993 CFAP44Q96MT7 982 aa7.76□□□□□ -1.17
ARHGEF12-213ENST00000532993 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
ARHGEF12-213ENST00000532993 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
ARHGEF12-213ENST00000532993 WDR43Q15061 677 aaKnown RBP eCLIP7.75□□□□□ -1.17
ARHGEF12-213ENST00000532993 NOP58Q9Y2X3 529 aaKnown RBP7.75□□□□□ -1.17
ARHGEF12-213ENST00000532993 PNNQ9H307 717 aaKnown RBP7.75□□□□□ -1.17
ARHGEF12-213ENST00000532993 KIF27Q86VH2 1401 aa7.75□□□□□ -1.17
ARHGEF12-213ENST00000532993 THOC2Q8NI27 1593 aaKnown RBP7.74□□□□□ -1.17
ARHGEF12-213ENST00000532993 EFCAB5A4FU69 1503 aa7.74□□□□□ -1.17
ARHGEF12-213ENST00000532993 ARHGAP35Q9NRY4 1499 aa7.74□□□□□ -1.17
ARHGEF12-213ENST00000532993 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
ARHGEF12-213ENST00000532993 MTUS2Q5JR59 1369 aa7.73□□□□□ -1.17
ARHGEF12-213ENST00000532993 CHAF1AQ13111 956 aaPredicted RBP7.72□□□□□ -1.17
ARHGEF12-213ENST00000532993 NRDCO43847 1150 aa7.72□□□□□ -1.17
ARHGEF12-213ENST00000532993 TAF3Q5VWG9 929 aa7.72□□□□□ -1.17
ARHGEF12-213ENST00000532993 FANCIQ9NVI1 1328 aa7.72□□□□□ -1.17
ARHGEF12-213ENST00000532993 GOLGA6L3A6NEY3 463 aa7.72□□□□□ -1.17
ARHGEF12-213ENST00000532993 DHX57Q6P158 1386 aaKnown RBP7.71□□□□□ -1.18
ARHGEF12-213ENST00000532993 WDR97A6NE52 1622 aa7.71□□□□□ -1.18
ARHGEF12-213ENST00000532993 SIN3AQ96ST3 1273 aa7.71□□□□□ -1.18
ARHGEF12-213ENST00000532993 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
ARHGEF12-213ENST00000532993 ISY1Q9ULR0 285 aaKnown RBP7.69□□□□□ -1.18
ARHGEF12-213ENST00000532993 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
ARHGEF12-213ENST00000532993 EIF4G2P78344 907 aaKnown RBP eCLIP7.69□□□□□ -1.18
ARHGEF12-213ENST00000532993 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
ARHGEF12-213ENST00000532993 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
ARHGEF12-213ENST00000532993 PLEKHG5O94827 1062 aa7.68□□□□□ -1.18
ARHGEF12-213ENST00000532993 FGD5Q6ZNL6 1462 aa7.68□□□□□ -1.18
ARHGEF12-213ENST00000532993 CCER2I3L3R5 266 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms