RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 ARHGAP35Q9NRY4 1499 aa28.44■■■□□ 2.14
ALKBH3-210ENST00000532962 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
ALKBH3-210ENST00000532962 SYNJ2O15056 1496 aa28.41■■■□□ 2.14
ALKBH3-210ENST00000532962 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
ALKBH3-210ENST00000532962 GRIN2AQ12879 1464 aa28.39■■■□□ 2.14
ALKBH3-210ENST00000532962 EFCAB5A4FU69 1503 aa28.37■■■□□ 2.13
ALKBH3-210ENST00000532962 FBLN2P98095 1184 aa28.34■■■□□ 2.13
ALKBH3-210ENST00000532962 IQGAP2Q13576 1575 aa28.31■■■□□ 2.12
ALKBH3-210ENST00000532962 APLP2Q06481 763 aa28.3■■■□□ 2.12
ALKBH3-210ENST00000532962 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
ALKBH3-210ENST00000532962 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
ALKBH3-210ENST00000532962 KIAA0586Q9BVV6 1533 aa28.27■■■□□ 2.12
ALKBH3-210ENST00000532962 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.12
ALKBH3-210ENST00000532962 SAMD9Q5K651 1589 aa28.22■■■□□ 2.11
ALKBH3-210ENST00000532962 FHOD3Q2V2M9 1422 aa28.2■■■□□ 2.1
ALKBH3-210ENST00000532962 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
ALKBH3-210ENST00000532962 PCGF6Q9BYE7 350 aa28.19■■■□□ 2.1
ALKBH3-210ENST00000532962 NUP160Q12769 1436 aa28.18■■■□□ 2.1
ALKBH3-210ENST00000532962 UGGT2Q9NYU1 1516 aa28.17■■■□□ 2.1
ALKBH3-210ENST00000532962 CHD1O14646 1710 aa28.13■■■□□ 2.09
ALKBH3-210ENST00000532962 FMN1Q68DA7 1419 aa28.13■■■□□ 2.09
ALKBH3-210ENST00000532962 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
ALKBH3-210ENST00000532962 PCF11O94913 1555 aaKnown RBP28.04■■■□□ 2.08
ALKBH3-210ENST00000532962 CASKIN1Q8WXD9 1431 aa28.03■■■□□ 2.08
ALKBH3-210ENST00000532962 FYCO1Q9BQS8 1478 aa28.03■■■□□ 2.08
ALKBH3-210ENST00000532962 ATP1B4Q9UN42 357 aaPredicted RBP28.02■■■□□ 2.08
ALKBH3-210ENST00000532962 JPH4Q96JJ6 628 aa28.01■■■□□ 2.07
ALKBH3-210ENST00000532962 KIAA0556O60303 1618 aa28■■■□□ 2.07
ALKBH3-210ENST00000532962 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
ALKBH3-210ENST00000532962 DISP1Q96F81 1524 aa27.99■■■□□ 2.07
ALKBH3-210ENST00000532962 CARMIL2Q6F5E8 1435 aa27.97■■■□□ 2.07
ALKBH3-210ENST00000532962 TIAM1Q13009 1591 aa27.94■■■□□ 2.06
ALKBH3-210ENST00000532962 OSCARQ8IYS5 282 aa27.92■■■□□ 2.06
ALKBH3-210ENST00000532962 KANK4Q5T7N3 995 aaPredicted RBP27.91■■■□□ 2.06
ALKBH3-210ENST00000532962 CFAP43Q8NDM7 1665 aa27.89■■■□□ 2.05
ALKBH3-210ENST00000532962 HECW1Q76N89 1606 aa27.83■■■□□ 2.05
ALKBH3-210ENST00000532962 PRG4Q92954 1404 aaPredicted RBP27.83■■■□□ 2.05
ALKBH3-210ENST00000532962 LRRC9Q6ZRR7 1453 aa27.81■■■□□ 2.04
ALKBH3-210ENST00000532962 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
ALKBH3-210ENST00000532962 CLASP1Q7Z460 1538 aa27.78■■■□□ 2.04
ALKBH3-210ENST00000532962 CCDC18Q5T9S5 1454 aa27.77■■■□□ 2.04
ALKBH3-210ENST00000532962 LRRIQ1Q96JM4 1722 aa27.76■■■□□ 2.03
ALKBH3-210ENST00000532962 RAPGEF6Q8TEU7 1601 aa27.74■■■□□ 2.03
ALKBH3-210ENST00000532962 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
ALKBH3-210ENST00000532962 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
ALKBH3-210ENST00000532962 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
ALKBH3-210ENST00000532962 EPRSP07814 1512 aaKnown RBP27.7■■■□□ 2.02
ALKBH3-210ENST00000532962 MTUS2Q5JR59 1369 aa27.69■■■□□ 2.02
ALKBH3-210ENST00000532962 PTPRGP23470 1445 aa27.67■■■□□ 2.02
ALKBH3-210ENST00000532962 PLB1Q6P1J6 1458 aa27.64■■■□□ 2.01
ALKBH3-210ENST00000532962 NUP153P49790 1475 aaKnown RBP27.63■■■□□ 2.01
ALKBH3-210ENST00000532962 CDK13Q14004 1512 aaKnown RBP27.61■■■□□ 2.01
ALKBH3-210ENST00000532962 EHBP1L1Q8N3D4 1523 aa27.61■■■□□ 2.01
ALKBH3-210ENST00000532962 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
ALKBH3-210ENST00000532962 ABCA8O94911 1581 aa27.6■■■□□ 2.01
ALKBH3-210ENST00000532962 ERCC6L2Q5T890 1561 aa27.58■■■□□ 2.01
ALKBH3-210ENST00000532962 RRBP1Q9P2E9 1410 aaKnown RBP27.58■■■□□ 2.01
ALKBH3-210ENST00000532962 CDK11AQ9UQ88 783 aaPredicted RBP27.58■■■□□ 2.01
ALKBH3-210ENST00000532962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.57■■■□□ 2
ALKBH3-210ENST00000532962 HNRNPUL2Q1KMD3 747 aaKnown RBP27.57■■■□□ 2
ALKBH3-210ENST00000532962 ARHGEF11O15085 1522 aa27.55■■■□□ 2
ALKBH3-210ENST00000532962 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
ALKBH3-210ENST00000532962 PHLDB1Q86UU1 1377 aa27.53■■■□□ 2
ALKBH3-210ENST00000532962 CCNB3Q8WWL7 1395 aa27.53■■■□□ 2
ALKBH3-210ENST00000532962 MAGI3Q5TCQ9 1506 aa27.52■■■□□ 2
ALKBH3-210ENST00000532962 UACAQ9BZF9 1416 aa27.5■■□□□ 1.99
ALKBH3-210ENST00000532962 NCOA2Q15596 1464 aa27.48■■□□□ 1.99
ALKBH3-210ENST00000532962 ATP10BO94823 1461 aa27.44■■□□□ 1.98
ALKBH3-210ENST00000532962 CYB5RLQ6IPT4 315 aa27.42■■□□□ 1.98
ALKBH3-210ENST00000532962 TROQ12816 1431 aaPredicted RBP27.4■■□□□ 1.98
ALKBH3-210ENST00000532962 PLEKHD1A6NEE1 506 aa27.39■■□□□ 1.98
ALKBH3-210ENST00000532962 ABCC2Q92887 1545 aa27.39■■□□□ 1.98
ALKBH3-210ENST00000532962 MYOM3Q5VTT5 1437 aa27.39■■□□□ 1.97
ALKBH3-210ENST00000532962 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
ALKBH3-210ENST00000532962 FGD6Q6ZV73 1430 aa27.37■■□□□ 1.97
ALKBH3-210ENST00000532962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.97
ALKBH3-210ENST00000532962 UHRF1BP1LA0JNW5 1464 aa27.34■■□□□ 1.97
ALKBH3-210ENST00000532962 ADCY10Q96PN6 1610 aa27.31■■□□□ 1.96
ALKBH3-210ENST00000532962 HRCP23327 699 aa27.3■■□□□ 1.96
ALKBH3-210ENST00000532962 ITGAEP38570 1179 aa27.3■■□□□ 1.96
ALKBH3-210ENST00000532962 MIA2Q96PC5 1412 aa27.25■■□□□ 1.95
ALKBH3-210ENST00000532962 PTPN23Q9H3S7 1636 aa27.25■■□□□ 1.95
ALKBH3-210ENST00000532962 KIF14Q15058 1648 aa27.25■■□□□ 1.95
ALKBH3-210ENST00000532962 KDM5BQ9UGL1 1544 aa27.21■■□□□ 1.95
ALKBH3-210ENST00000532962 ZCCHC11Q5TAX3 1644 aaKnown RBP27.21■■□□□ 1.95
ALKBH3-210ENST00000532962 TCOF1Q13428 1488 aaKnown RBP27.2■■□□□ 1.94
ALKBH3-210ENST00000532962 ITSN2Q9NZM3 1697 aa27.19■■□□□ 1.94
ALKBH3-210ENST00000532962 CCER1Q8TC90 406 aaPredicted RBP27.18■■□□□ 1.94
ALKBH3-210ENST00000532962 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
ALKBH3-210ENST00000532962 ZEB1P37275 1124 aaPredicted RBP27.14■■□□□ 1.94
ALKBH3-210ENST00000532962 GPATCH8Q9UKJ3 1502 aaKnown RBP27.13■■□□□ 1.93
ALKBH3-210ENST00000532962 ABCC10Q5T3U5 1492 aa27.12■■□□□ 1.93
ALKBH3-210ENST00000532962 CFDP1Q9UEE9 299 aaPredicted RBP27.12■■□□□ 1.93
ALKBH3-210ENST00000532962 CDC42BPAQ5VT25 1732 aa27.08■■□□□ 1.93
ALKBH3-210ENST00000532962 NPM1P06748 294 aaKnown RBP eCLIP27.08■■□□□ 1.93
ALKBH3-210ENST00000532962 KCNH8Q96L42 1107 aa27.05■■□□□ 1.92
ALKBH3-210ENST00000532962 SETD5Q9C0A6 1442 aa27.05■■□□□ 1.92
ALKBH3-210ENST00000532962 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
ALKBH3-210ENST00000532962 CAMSAP2Q08AD1 1489 aa27.01■■□□□ 1.91
ALKBH3-210ENST00000532962 ZNF644Q9H582 1327 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms