RNA–Protein interactions for RNA: ENST00000532705.1

COMMD9-206, Transcript of COMM domain containing 9, humanhuman

TSL 2 BASIC

Gene COMMD9, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-206ENST00000532705 MSH5O43196 834 aa17.1■□□□□ 0.33
COMMD9-206ENST00000532705 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
COMMD9-206ENST00000532705 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
COMMD9-206ENST00000532705 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
COMMD9-206ENST00000532705 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
COMMD9-206ENST00000532705 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
COMMD9-206ENST00000532705 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
COMMD9-206ENST00000532705 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
COMMD9-206ENST00000532705 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
COMMD9-206ENST00000532705 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
COMMD9-206ENST00000532705 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
COMMD9-206ENST00000532705 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
COMMD9-206ENST00000532705 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
COMMD9-206ENST00000532705 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
COMMD9-206ENST00000532705 PRG4Q92954 1404 aaPredicted RBP16.94■□□□□ 0.3
COMMD9-206ENST00000532705 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
COMMD9-206ENST00000532705 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
COMMD9-206ENST00000532705 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
COMMD9-206ENST00000532705 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
COMMD9-206ENST00000532705 KIF21BO75037 1637 aa16.84■□□□□ 0.29
COMMD9-206ENST00000532705 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
COMMD9-206ENST00000532705 GOLGA3Q08378 1498 aa16.82■□□□□ 0.28
COMMD9-206ENST00000532705 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
COMMD9-206ENST00000532705 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
COMMD9-206ENST00000532705 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
COMMD9-206ENST00000532705 PTPRGP23470 1445 aa16.79■□□□□ 0.28
COMMD9-206ENST00000532705 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
COMMD9-206ENST00000532705 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
COMMD9-206ENST00000532705 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
COMMD9-206ENST00000532705 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
COMMD9-206ENST00000532705 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
COMMD9-206ENST00000532705 TTBK1Q5TCY1 1321 aaPredicted RBP16.66■□□□□ 0.26
COMMD9-206ENST00000532705 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
COMMD9-206ENST00000532705 UHRF1BP1LA0JNW5 1464 aa16.65■□□□□ 0.26
COMMD9-206ENST00000532705 EFCAB5A4FU69 1503 aa16.64■□□□□ 0.25
COMMD9-206ENST00000532705 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
COMMD9-206ENST00000532705 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
COMMD9-206ENST00000532705 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
COMMD9-206ENST00000532705 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
COMMD9-206ENST00000532705 ABCC2Q92887 1545 aa16.6■□□□□ 0.25
COMMD9-206ENST00000532705 ADCY10Q96PN6 1610 aa16.59■□□□□ 0.25
COMMD9-206ENST00000532705 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
COMMD9-206ENST00000532705 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
COMMD9-206ENST00000532705 PLB1Q6P1J6 1458 aa16.54■□□□□ 0.24
COMMD9-206ENST00000532705 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
COMMD9-206ENST00000532705 ABCA8O94911 1581 aa16.53■□□□□ 0.24
COMMD9-206ENST00000532705 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
COMMD9-206ENST00000532705 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
COMMD9-206ENST00000532705 CLIP1P30622 1438 aa16.48■□□□□ 0.23
COMMD9-206ENST00000532705 ABCC10Q5T3U5 1492 aa16.47■□□□□ 0.23
COMMD9-206ENST00000532705 ASXL2Q76L83 1435 aa16.46■□□□□ 0.23
COMMD9-206ENST00000532705 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
COMMD9-206ENST00000532705 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
COMMD9-206ENST00000532705 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
COMMD9-206ENST00000532705 ATP10BO94823 1461 aa16.43■□□□□ 0.22
COMMD9-206ENST00000532705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
COMMD9-206ENST00000532705 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
COMMD9-206ENST00000532705 ZCCHC11Q5TAX3 1644 aaKnown RBP16.43■□□□□ 0.22
COMMD9-206ENST00000532705 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
COMMD9-206ENST00000532705 PLEKHD1A6NEE1 506 aa16.41■□□□□ 0.22
COMMD9-206ENST00000532705 WDR7Q9Y4E6 1490 aa16.41■□□□□ 0.22
COMMD9-206ENST00000532705 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
COMMD9-206ENST00000532705 NUP153P49790 1475 aaKnown RBP16.4■□□□□ 0.22
COMMD9-206ENST00000532705 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
COMMD9-206ENST00000532705 GLI2P10070 1586 aa16.37■□□□□ 0.21
COMMD9-206ENST00000532705 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
COMMD9-206ENST00000532705 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
COMMD9-206ENST00000532705 EPRSP07814 1512 aaKnown RBP16.36■□□□□ 0.21
COMMD9-206ENST00000532705 HECW1Q76N89 1606 aa16.36■□□□□ 0.21
COMMD9-206ENST00000532705 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
COMMD9-206ENST00000532705 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
COMMD9-206ENST00000532705 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.21
COMMD9-206ENST00000532705 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
COMMD9-206ENST00000532705 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
COMMD9-206ENST00000532705 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
COMMD9-206ENST00000532705 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
COMMD9-206ENST00000532705 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
COMMD9-206ENST00000532705 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
COMMD9-206ENST00000532705 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
COMMD9-206ENST00000532705 PCF11O94913 1555 aaKnown RBP16.24■□□□□ 0.19
COMMD9-206ENST00000532705 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
COMMD9-206ENST00000532705 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
COMMD9-206ENST00000532705 TROQ12816 1431 aaPredicted RBP16.23■□□□□ 0.19
COMMD9-206ENST00000532705 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
COMMD9-206ENST00000532705 ABCA9Q8IUA7 1624 aa16.21■□□□□ 0.19
COMMD9-206ENST00000532705 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
COMMD9-206ENST00000532705 APLP2Q06481 763 aa16.18■□□□□ 0.18
COMMD9-206ENST00000532705 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
COMMD9-206ENST00000532705 KIF14Q15058 1648 aa16.15■□□□□ 0.18
COMMD9-206ENST00000532705 NEO1Q92859 1461 aa16.15■□□□□ 0.18
COMMD9-206ENST00000532705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.18
COMMD9-206ENST00000532705 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
COMMD9-206ENST00000532705 PLCH2O75038 1416 aa16.13■□□□□ 0.17
COMMD9-206ENST00000532705 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
COMMD9-206ENST00000532705 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
COMMD9-206ENST00000532705 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
COMMD9-206ENST00000532705 KDM6BO15054 1643 aa16.12■□□□□ 0.17
COMMD9-206ENST00000532705 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
COMMD9-206ENST00000532705 FANCAO15360 1455 aa16.09■□□□□ 0.17
COMMD9-206ENST00000532705 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms