RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-208	ENST00000532446	NUP160	Q12769	1436 aa		29.17	■■■□□ 2.26
PPP1CA-208	ENST00000532446	CTTNBP2	Q8WZ74	1663 aa		29.16	■■■□□ 2.26
PPP1CA-208	ENST00000532446	TNIK	Q9UKE5	1360 aa		29.15	■■■□□ 2.26
PPP1CA-208	ENST00000532446	CEP170	Q5SW79	1584 aa		29.15	■■■□□ 2.26
PPP1CA-208	ENST00000532446	KIAA0586	Q9BVV6	1533 aa		29.07	■■■□□ 2.24
PPP1CA-208	ENST00000532446	IQGAP2	Q13576	1575 aa		29.02	■■■□□ 2.24
PPP1CA-208	ENST00000532446	RIMBP3C	A6NJZ7	1639 aa		29.01	■■■□□ 2.24
PPP1CA-208	ENST00000532446	RIMBP3B	A6NNM3	1639 aa		29.01	■■■□□ 2.24
PPP1CA-208	ENST00000532446	RIMBP3	Q9UFD9	1639 aa		29.01	■■■□□ 2.24
PPP1CA-208	ENST00000532446	CLASP1	Q7Z460	1538 aa		28.98	■■■□□ 2.23
PPP1CA-208	ENST00000532446	ARHGEF11	O15085	1522 aa		28.96	■■■□□ 2.23
PPP1CA-208	ENST00000532446	CEP162	Q5TB80	1403 aa		28.93	■■■□□ 2.22
PPP1CA-208	ENST00000532446	UGGT2	Q9NYU1	1516 aa		28.89	■■■□□ 2.22
PPP1CA-208	ENST00000532446	SHROOM2	Q13796	1616 aa		28.87	■■■□□ 2.21
PPP1CA-208	ENST00000532446	RANGAP1	P46060	587 aa	Predicted RBP	28.86	■■■□□ 2.21
PPP1CA-208	ENST00000532446	JPH4	Q96JJ6	628 aa		28.86	■■■□□ 2.21
PPP1CA-208	ENST00000532446	CLIP1	P30622	1438 aa		28.86	■■■□□ 2.21
PPP1CA-208	ENST00000532446	SAMD9	Q5K651	1589 aa		28.82	■■■□□ 2.2
PPP1CA-208	ENST00000532446	EFCAB5	A4FU69	1503 aa		28.81	■■■□□ 2.2
PPP1CA-208	ENST00000532446	ARHGAP35	Q9NRY4	1499 aa		28.8	■■■□□ 2.2
PPP1CA-208	ENST00000532446	DISP1	Q96F81	1524 aa		28.77	■■■□□ 2.2
PPP1CA-208	ENST00000532446	PRG4	Q92954	1404 aa	Predicted RBP	28.74	■■■□□ 2.19
PPP1CA-208	ENST00000532446	KIAA0556	O60303	1618 aa		28.74	■■■□□ 2.19
PPP1CA-208	ENST00000532446	CARMIL2	Q6F5E8	1435 aa		28.71	■■■□□ 2.19
PPP1CA-208	ENST00000532446	CYB5RL	Q6IPT4	315 aa		28.71	■■■□□ 2.19
PPP1CA-208	ENST00000532446	ARAP1	Q96P48	1450 aa		28.69	■■■□□ 2.18
PPP1CA-208	ENST00000532446	P3H3	Q8IVL6	736 aa		28.68	■■■□□ 2.18
PPP1CA-208	ENST00000532446	ERCC6L2	Q5T890	1561 aa		28.66	■■■□□ 2.18
PPP1CA-208	ENST00000532446	FHOD3	Q2V2M9	1422 aa		28.66	■■■□□ 2.18
PPP1CA-208	ENST00000532446	FMN1	Q68DA7	1419 aa		28.52	■■■□□ 2.16
PPP1CA-208	ENST00000532446	VPS8	Q8N3P4	1428 aa		28.52	■■■□□ 2.16
PPP1CA-208	ENST00000532446	PTPRG	P23470	1445 aa		28.48	■■■□□ 2.15
PPP1CA-208	ENST00000532446	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.45	■■■□□ 2.14
PPP1CA-208	ENST00000532446	PCF11	O94913	1555 aa	Known RBP	28.42	■■■□□ 2.14
PPP1CA-208	ENST00000532446	CASKIN1	Q8WXD9	1431 aa		28.39	■■■□□ 2.14
PPP1CA-208	ENST00000532446	ABCA8	O94911	1581 aa		28.38	■■■□□ 2.13
PPP1CA-208	ENST00000532446	PLB1	Q6P1J6	1458 aa		28.38	■■■□□ 2.13
PPP1CA-208	ENST00000532446	RAPGEF6	Q8TEU7	1601 aa		28.38	■■■□□ 2.13
PPP1CA-208	ENST00000532446	FYCO1	Q9BQS8	1478 aa		28.37	■■■□□ 2.13
PPP1CA-208	ENST00000532446	UACA	Q9BZF9	1416 aa		28.33	■■■□□ 2.13
PPP1CA-208	ENST00000532446	HECW1	Q76N89	1606 aa		28.31	■■■□□ 2.12
PPP1CA-208	ENST00000532446	NUP153	P49790	1475 aa	Known RBP	28.28	■■■□□ 2.12
PPP1CA-208	ENST00000532446	ABCC2	Q92887	1545 aa		28.27	■■■□□ 2.12
PPP1CA-208	ENST00000532446	LRRIQ1	Q96JM4	1722 aa		28.27	■■■□□ 2.12
PPP1CA-208	ENST00000532446	UHRF1BP1L	A0JNW5	1464 aa		28.27	■■■□□ 2.12
PPP1CA-208	ENST00000532446	TRH	P20396	242 aa	Predicted RBP	28.27	■■■□□ 2.12
PPP1CA-208	ENST00000532446	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.26	■■■□□ 2.11
PPP1CA-208	ENST00000532446	ADCY10	Q96PN6	1610 aa		28.23	■■■□□ 2.11
PPP1CA-208	ENST00000532446	EPRS	P07814	1512 aa	Known RBP	28.21	■■■□□ 2.11
PPP1CA-208	ENST00000532446	CCDC18	Q5T9S5	1454 aa		28.19	■■■□□ 2.1
PPP1CA-208	ENST00000532446	MAP3K1	Q13233	1512 aa		28.19	■■■□□ 2.1
PPP1CA-208	ENST00000532446	CFAP43	Q8NDM7	1665 aa		28.17	■■■□□ 2.1
PPP1CA-208	ENST00000532446	TIAM1	Q13009	1591 aa		28.17	■■■□□ 2.1
PPP1CA-208	ENST00000532446	CDK13	Q14004	1512 aa	Known RBP	28.16	■■■□□ 2.1
PPP1CA-208	ENST00000532446	APLP2	Q06481	763 aa		28.15	■■■□□ 2.1
PPP1CA-208	ENST00000532446	ATP10B	O94823	1461 aa		28.15	■■■□□ 2.1
PPP1CA-208	ENST00000532446	KDM5B	Q9UGL1	1544 aa		28.13	■■■□□ 2.09
PPP1CA-208	ENST00000532446	ARID3C	A6NKF2	412 aa		28.13	■■■□□ 2.09
PPP1CA-208	ENST00000532446	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.1	■■■□□ 2.09
PPP1CA-208	ENST00000532446	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.04	■■■□□ 2.08
PPP1CA-208	ENST00000532446	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.04	■■■□□ 2.08
PPP1CA-208	ENST00000532446	LRRC9	Q6ZRR7	1453 aa		28.03	■■■□□ 2.08
PPP1CA-208	ENST00000532446	KANK4	Q5T7N3	995 aa	Predicted RBP	28.02	■■■□□ 2.08
PPP1CA-208	ENST00000532446	MAGI3	Q5TCQ9	1506 aa		28.01	■■■□□ 2.07
PPP1CA-208	ENST00000532446	CDK11A	Q9UQ88	783 aa	Predicted RBP	28	■■■□□ 2.07
PPP1CA-208	ENST00000532446	NPM1	P06748	294 aa	Known RBP eCLIP	27.98	■■■□□ 2.07
PPP1CA-208	ENST00000532446	MTUS2	Q5JR59	1369 aa		27.97	■■■□□ 2.07
PPP1CA-208	ENST00000532446	EHBP1L1	Q8N3D4	1523 aa		27.96	■■■□□ 2.07
PPP1CA-208	ENST00000532446	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.95	■■■□□ 2.07
PPP1CA-208	ENST00000532446	PLEKHD1	A6NEE1	506 aa		27.95	■■■□□ 2.06
PPP1CA-208	ENST00000532446	TRO	Q12816	1431 aa	Predicted RBP	27.94	■■■□□ 2.06
PPP1CA-208	ENST00000532446	ASXL2	Q76L83	1435 aa		27.89	■■■□□ 2.06
PPP1CA-208	ENST00000532446	MAPKBP1	O60336	1514 aa		27.88	■■■□□ 2.05
PPP1CA-208	ENST00000532446	WDR7	Q9Y4E6	1490 aa		27.87	■■■□□ 2.05
PPP1CA-208	ENST00000532446	SUPT6H	Q7KZ85	1726 aa	Known RBP	27.86	■■■□□ 2.05
PPP1CA-208	ENST00000532446	KIF14	Q15058	1648 aa		27.83	■■■□□ 2.05
PPP1CA-208	ENST00000532446	NCOA2	Q15596	1464 aa		27.8	■■■□□ 2.04
PPP1CA-208	ENST00000532446	KIF13A	Q9H1H9	1805 aa		27.8	■■■□□ 2.04
PPP1CA-208	ENST00000532446	KCNH8	Q96L42	1107 aa		27.76	■■■□□ 2.03
PPP1CA-208	ENST00000532446	ABCC10	Q5T3U5	1492 aa		27.74	■■■□□ 2.03
PPP1CA-208	ENST00000532446	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.73	■■■□□ 2.03
PPP1CA-208	ENST00000532446	PHLDB1	Q86UU1	1377 aa		27.72	■■■□□ 2.03
PPP1CA-208	ENST00000532446	TTC37	Q6PGP7	1564 aa		27.7	■■■□□ 2.03
PPP1CA-208	ENST00000532446	ABCA9	Q8IUA7	1624 aa		27.69	■■■□□ 2.02
PPP1CA-208	ENST00000532446	CCNB3	Q8WWL7	1395 aa		27.66	■■■□□ 2.02
PPP1CA-208	ENST00000532446	CDC42BPA	Q5VT25	1732 aa		27.66	■■■□□ 2.02
PPP1CA-208	ENST00000532446	FAM69C	Q0P6D2	419 aa		27.65	■■■□□ 2.02
PPP1CA-208	ENST00000532446	MYOM3	Q5VTT5	1437 aa		27.65	■■■□□ 2.02
PPP1CA-208	ENST00000532446	DIP2B	Q9P265	1576 aa		27.65	■■■□□ 2.02
PPP1CA-208	ENST00000532446	GLI2	P10070	1586 aa		27.64	■■■□□ 2.02
PPP1CA-208	ENST00000532446	GPATCH8	Q9UKJ3	1502 aa	Known RBP	27.64	■■■□□ 2.01
PPP1CA-208	ENST00000532446	ITSN2	Q9NZM3	1697 aa		27.64	■■■□□ 2.01
PPP1CA-208	ENST00000532446	MYO5C	Q9NQX4	1742 aa		27.62	■■■□□ 2.01
PPP1CA-208	ENST00000532446	PREX2	Q70Z35	1606 aa		27.6	■■■□□ 2.01
PPP1CA-208	ENST00000532446	CDC42BPB	Q9Y5S2	1711 aa		27.59	■■■□□ 2.01
PPP1CA-208	ENST00000532446	FGD6	Q6ZV73	1430 aa		27.58	■■■□□ 2.01
PPP1CA-208	ENST00000532446	MIA2	Q96PC5	1412 aa		27.56	■■■□□ 2
PPP1CA-208	ENST00000532446	RRBP1	Q9P2E9	1410 aa	Known RBP	27.56	■■■□□ 2
PPP1CA-208	ENST00000532446	PLCH2	O75038	1416 aa		27.56	■■■□□ 2
PPP1CA-208	ENST00000532446	MAP3K4	Q9Y6R4	1608 aa		27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms