RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
VPS26B-206ENST00000531741 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.58
VPS26B-206ENST00000531741 WDR97A6NE52 1622 aa24.89■■□□□ 1.58
VPS26B-206ENST00000531741 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
VPS26B-206ENST00000531741 CTTNBP2Q8WZ74 1663 aa24.84■■□□□ 1.57
VPS26B-206ENST00000531741 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
VPS26B-206ENST00000531741 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
VPS26B-206ENST00000531741 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.56
VPS26B-206ENST00000531741 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
VPS26B-206ENST00000531741 FYCO1Q9BQS8 1478 aa24.81■■□□□ 1.56
VPS26B-206ENST00000531741 ABCA5Q8WWZ7 1642 aa24.78■■□□□ 1.56
VPS26B-206ENST00000531741 CASKIN1Q8WXD9 1431 aa24.76■■□□□ 1.55
VPS26B-206ENST00000531741 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
VPS26B-206ENST00000531741 PHLDB1Q86UU1 1377 aa24.73■■□□□ 1.55
VPS26B-206ENST00000531741 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
VPS26B-206ENST00000531741 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
VPS26B-206ENST00000531741 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
VPS26B-206ENST00000531741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.68■■□□□ 1.54
VPS26B-206ENST00000531741 SETD5Q9C0A6 1442 aa24.66■■□□□ 1.54
VPS26B-206ENST00000531741 MIER1Q8N108 512 aa24.66■■□□□ 1.54
VPS26B-206ENST00000531741 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
VPS26B-206ENST00000531741 SAMD9Q5K651 1589 aa24.65■■□□□ 1.54
VPS26B-206ENST00000531741 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
VPS26B-206ENST00000531741 MAPKBP1O60336 1514 aa24.62■■□□□ 1.53
VPS26B-206ENST00000531741 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
VPS26B-206ENST00000531741 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
VPS26B-206ENST00000531741 ITGAEP38570 1179 aa24.6■■□□□ 1.53
VPS26B-206ENST00000531741 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
VPS26B-206ENST00000531741 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
VPS26B-206ENST00000531741 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
VPS26B-206ENST00000531741 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
VPS26B-206ENST00000531741 GTF3C3Q9Y5Q9 886 aa24.55■■□□□ 1.52
VPS26B-206ENST00000531741 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
VPS26B-206ENST00000531741 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
VPS26B-206ENST00000531741 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
VPS26B-206ENST00000531741 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
VPS26B-206ENST00000531741 LRRIQ1Q96JM4 1722 aa24.47■■□□□ 1.51
VPS26B-206ENST00000531741 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
VPS26B-206ENST00000531741 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
VPS26B-206ENST00000531741 TIMELESSQ9UNS1 1208 aa24.42■■□□□ 1.5
VPS26B-206ENST00000531741 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
VPS26B-206ENST00000531741 EHBP1L1Q8N3D4 1523 aa24.4■■□□□ 1.5
VPS26B-206ENST00000531741 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
VPS26B-206ENST00000531741 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
VPS26B-206ENST00000531741 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
VPS26B-206ENST00000531741 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
VPS26B-206ENST00000531741 CCDC18Q5T9S5 1454 aa24.36■■□□□ 1.49
VPS26B-206ENST00000531741 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
VPS26B-206ENST00000531741 NCOA2Q15596 1464 aa24.36■■□□□ 1.49
VPS26B-206ENST00000531741 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
VPS26B-206ENST00000531741 HFM1A2PYH4 1435 aa24.34■■□□□ 1.49
VPS26B-206ENST00000531741 IQGAP2Q13576 1575 aa24.33■■□□□ 1.49
VPS26B-206ENST00000531741 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
VPS26B-206ENST00000531741 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
VPS26B-206ENST00000531741 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
VPS26B-206ENST00000531741 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
VPS26B-206ENST00000531741 UACAQ9BZF9 1416 aa24.26■■□□□ 1.47
VPS26B-206ENST00000531741 SIN3AQ96ST3 1273 aa24.25■■□□□ 1.47
VPS26B-206ENST00000531741 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
VPS26B-206ENST00000531741 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
VPS26B-206ENST00000531741 TCOF1Q13428 1488 aaKnown RBP24.24■■□□□ 1.47
VPS26B-206ENST00000531741 WDR62O43379 1518 aa24.22■■□□□ 1.47
VPS26B-206ENST00000531741 NAIPQ13075 1403 aa24.22■■□□□ 1.47
VPS26B-206ENST00000531741 EPRSP07814 1512 aaKnown RBP24.2■■□□□ 1.46
VPS26B-206ENST00000531741 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
VPS26B-206ENST00000531741 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
VPS26B-206ENST00000531741 MIA2Q96PC5 1412 aa24.14■■□□□ 1.46
VPS26B-206ENST00000531741 GCC2Q8IWJ2 1684 aa24.13■■□□□ 1.45
VPS26B-206ENST00000531741 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
VPS26B-206ENST00000531741 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
VPS26B-206ENST00000531741 KIAA0556O60303 1618 aa24.08■■□□□ 1.44
VPS26B-206ENST00000531741 CDK13Q14004 1512 aaKnown RBP24.07■■□□□ 1.44
VPS26B-206ENST00000531741 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
VPS26B-206ENST00000531741 DISP1Q96F81 1524 aa24.05■■□□□ 1.44
VPS26B-206ENST00000531741 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
VPS26B-206ENST00000531741 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
VPS26B-206ENST00000531741 KDM5BQ9UGL1 1544 aa23.98■■□□□ 1.43
VPS26B-206ENST00000531741 RAPGEF6Q8TEU7 1601 aa23.97■■□□□ 1.43
VPS26B-206ENST00000531741 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
VPS26B-206ENST00000531741 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
VPS26B-206ENST00000531741 DDX10Q13206 875 aaKnown RBP23.95■■□□□ 1.42
VPS26B-206ENST00000531741 ROCK1Q13464 1354 aa23.94■■□□□ 1.42
VPS26B-206ENST00000531741 DENND4BO75064 1496 aaPredicted RBP23.93■■□□□ 1.42
VPS26B-206ENST00000531741 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
VPS26B-206ENST00000531741 DNMT1P26358 1616 aaKnown RBP23.91■■□□□ 1.42
VPS26B-206ENST00000531741 KDM6BO15054 1643 aa23.9■■□□□ 1.42
VPS26B-206ENST00000531741 DAPK1P53355 1430 aa23.88■■□□□ 1.41
VPS26B-206ENST00000531741 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
VPS26B-206ENST00000531741 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
VPS26B-206ENST00000531741 CHIC2Q9UKJ5 165 aa23.87■■□□□ 1.41
VPS26B-206ENST00000531741 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
VPS26B-206ENST00000531741 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
VPS26B-206ENST00000531741 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
VPS26B-206ENST00000531741 KCNH8Q96L42 1107 aa23.83■■□□□ 1.41
VPS26B-206ENST00000531741 ABCC5O15440 1437 aa23.83■■□□□ 1.41
VPS26B-206ENST00000531741 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
VPS26B-206ENST00000531741 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
VPS26B-206ENST00000531741 MPHOSPH9Q99550 1183 aa23.8■■□□□ 1.4
VPS26B-206ENST00000531741 NUP160Q12769 1436 aa23.8■■□□□ 1.4
VPS26B-206ENST00000531741 ITSN2Q9NZM3 1697 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms