RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
NXF1-210ENST00000531579 RAPGEF2Q9Y4G8 1499 aa25.01■■□□□ 1.59
NXF1-210ENST00000531579 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
NXF1-210ENST00000531579 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
NXF1-210ENST00000531579 EEA1Q15075 1411 aa24.95■■□□□ 1.59
NXF1-210ENST00000531579 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.58
NXF1-210ENST00000531579 PRXQ9BXM0 1461 aa24.9■■□□□ 1.58
NXF1-210ENST00000531579 ERCC6L2Q5T890 1561 aa24.87■■□□□ 1.57
NXF1-210ENST00000531579 FAM9AQ8IZU1 332 aaPredicted RBP24.8■■□□□ 1.56
NXF1-210ENST00000531579 IQGAP2Q13576 1575 aa24.8■■□□□ 1.56
NXF1-210ENST00000531579 CARMIL2Q6F5E8 1435 aa24.79■■□□□ 1.56
NXF1-210ENST00000531579 PTPRGP23470 1445 aa24.69■■□□□ 1.54
NXF1-210ENST00000531579 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
NXF1-210ENST00000531579 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
NXF1-210ENST00000531579 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
NXF1-210ENST00000531579 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
NXF1-210ENST00000531579 DISP1Q96F81 1524 aa24.64■■□□□ 1.53
NXF1-210ENST00000531579 CTTNBP2Q8WZ74 1663 aa24.63■■□□□ 1.53
NXF1-210ENST00000531579 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
NXF1-210ENST00000531579 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
NXF1-210ENST00000531579 KIF21BO75037 1637 aa24.57■■□□□ 1.52
NXF1-210ENST00000531579 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
NXF1-210ENST00000531579 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
NXF1-210ENST00000531579 UACAQ9BZF9 1416 aa24.51■■□□□ 1.51
NXF1-210ENST00000531579 ADCY10Q96PN6 1610 aa24.47■■□□□ 1.51
NXF1-210ENST00000531579 UHRF1BP1LA0JNW5 1464 aa24.47■■□□□ 1.51
NXF1-210ENST00000531579 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
NXF1-210ENST00000531579 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
NXF1-210ENST00000531579 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
NXF1-210ENST00000531579 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
NXF1-210ENST00000531579 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
NXF1-210ENST00000531579 SAMD9Q5K651 1589 aa24.37■■□□□ 1.49
NXF1-210ENST00000531579 KDM5BQ9UGL1 1544 aa24.34■■□□□ 1.49
NXF1-210ENST00000531579 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.49
NXF1-210ENST00000531579 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
NXF1-210ENST00000531579 ABCC10Q5T3U5 1492 aa24.32■■□□□ 1.48
NXF1-210ENST00000531579 EFCAB5A4FU69 1503 aa24.3■■□□□ 1.48
NXF1-210ENST00000531579 ABCA8O94911 1581 aa24.29■■□□□ 1.48
NXF1-210ENST00000531579 ASXL2Q76L83 1435 aa24.27■■□□□ 1.48
NXF1-210ENST00000531579 FHOD3Q2V2M9 1422 aa24.24■■□□□ 1.47
NXF1-210ENST00000531579 ZCCHC11Q5TAX3 1644 aaKnown RBP24.19■■□□□ 1.46
NXF1-210ENST00000531579 DIP2BQ9P265 1576 aa24.18■■□□□ 1.46
NXF1-210ENST00000531579 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
NXF1-210ENST00000531579 ATP10BO94823 1461 aa24.16■■□□□ 1.46
NXF1-210ENST00000531579 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
NXF1-210ENST00000531579 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
NXF1-210ENST00000531579 RAPGEF6Q8TEU7 1601 aa24.15■■□□□ 1.46
NXF1-210ENST00000531579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
NXF1-210ENST00000531579 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
NXF1-210ENST00000531579 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
NXF1-210ENST00000531579 GLI2P10070 1586 aa24.12■■□□□ 1.45
NXF1-210ENST00000531579 ARID3CA6NKF2 412 aa24.12■■□□□ 1.45
NXF1-210ENST00000531579 EPRSP07814 1512 aaKnown RBP24.11■■□□□ 1.45
NXF1-210ENST00000531579 KCNH8Q96L42 1107 aa24.1■■□□□ 1.45
NXF1-210ENST00000531579 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
NXF1-210ENST00000531579 PLEKHD1A6NEE1 506 aa24.07■■□□□ 1.44
NXF1-210ENST00000531579 CLIP1P30622 1438 aa24.05■■□□□ 1.44
NXF1-210ENST00000531579 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
NXF1-210ENST00000531579 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
NXF1-210ENST00000531579 CDK11AQ9UQ88 783 aaPredicted RBP23.99■■□□□ 1.43
NXF1-210ENST00000531579 CD109Q6YHK3 1445 aa23.96■■□□□ 1.43
NXF1-210ENST00000531579 MAP3K4Q9Y6R4 1608 aa23.95■■□□□ 1.42
NXF1-210ENST00000531579 TEX14Q8IWB6 1497 aa23.94■■□□□ 1.42
NXF1-210ENST00000531579 TSPOAP1O95153 1857 aa23.94■■□□□ 1.42
NXF1-210ENST00000531579 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
NXF1-210ENST00000531579 CASKIN1Q8WXD9 1431 aa23.93■■□□□ 1.42
NXF1-210ENST00000531579 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
NXF1-210ENST00000531579 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.42
NXF1-210ENST00000531579 CFAP43Q8NDM7 1665 aa23.89■■□□□ 1.41
NXF1-210ENST00000531579 CDK13Q14004 1512 aaKnown RBP23.86■■□□□ 1.41
NXF1-210ENST00000531579 PPRC1Q5VV67 1664 aaKnown RBP23.85■■□□□ 1.41
NXF1-210ENST00000531579 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
NXF1-210ENST00000531579 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.41
NXF1-210ENST00000531579 FYCO1Q9BQS8 1478 aa23.83■■□□□ 1.41
NXF1-210ENST00000531579 PHLDB1Q86UU1 1377 aa23.83■■□□□ 1.41
NXF1-210ENST00000531579 KDM6BO15054 1643 aa23.83■■□□□ 1.41
NXF1-210ENST00000531579 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
NXF1-210ENST00000531579 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
NXF1-210ENST00000531579 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
NXF1-210ENST00000531579 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
NXF1-210ENST00000531579 NEO1Q92859 1461 aa23.72■■□□□ 1.39
NXF1-210ENST00000531579 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
NXF1-210ENST00000531579 LRRIQ1Q96JM4 1722 aa23.7■■□□□ 1.38
NXF1-210ENST00000531579 PLCH2O75038 1416 aa23.69■■□□□ 1.38
NXF1-210ENST00000531579 EFCAB2Q5VUJ9 269 aa23.67■■□□□ 1.38
NXF1-210ENST00000531579 KIF14Q15058 1648 aa23.65■■□□□ 1.38
NXF1-210ENST00000531579 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
NXF1-210ENST00000531579 FANCAO15360 1455 aa23.64■■□□□ 1.38
NXF1-210ENST00000531579 TTC37Q6PGP7 1564 aa23.63■■□□□ 1.37
NXF1-210ENST00000531579 AKNAQ7Z591 1439 aa23.63■■□□□ 1.37
NXF1-210ENST00000531579 MTUS2Q5JR59 1369 aa23.62■■□□□ 1.37
NXF1-210ENST00000531579 RAPGEF3O95398 923 aa23.59■■□□□ 1.37
NXF1-210ENST00000531579 CFAP74Q9C0B2 1584 aa23.58■■□□□ 1.37
NXF1-210ENST00000531579 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
NXF1-210ENST00000531579 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
NXF1-210ENST00000531579 APLP2Q06481 763 aa23.52■■□□□ 1.36
NXF1-210ENST00000531579 SCAPERQ9BY12 1400 aa23.51■■□□□ 1.35
NXF1-210ENST00000531579 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
NXF1-210ENST00000531579 ADGRL1O94910 1474 aa23.5■■□□□ 1.35
NXF1-210ENST00000531579 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms