RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	KIAA0586	Q9BVV6	1533 aa		34.99	■■■■□ 3.19
PABPC4-225	ENST00000531243	CTTNBP2	Q8WZ74	1663 aa		34.97	■■■■□ 3.19
PABPC4-225	ENST00000531243	IQGAP2	Q13576	1575 aa		34.89	■■■■□ 3.18
PABPC4-225	ENST00000531243	GOLGA3	Q08378	1498 aa		34.88	■■■■□ 3.17
PABPC4-225	ENST00000531243	SHROOM2	Q13796	1616 aa		34.88	■■■■□ 3.17
PABPC4-225	ENST00000531243	JPH4	Q96JJ6	628 aa		34.83	■■■■□ 3.17
PABPC4-225	ENST00000531243	ARHGEF11	O15085	1522 aa		34.8	■■■■□ 3.16
PABPC4-225	ENST00000531243	RIMBP3C	A6NJZ7	1639 aa		34.77	■■■■□ 3.16
PABPC4-225	ENST00000531243	RIMBP3B	A6NNM3	1639 aa		34.77	■■■■□ 3.16
PABPC4-225	ENST00000531243	RIMBP3	Q9UFD9	1639 aa		34.77	■■■■□ 3.16
PABPC4-225	ENST00000531243	UBTF	P17480	764 aa	Known RBP	34.76	■■■■□ 3.16
PABPC4-225	ENST00000531243	PRG4	Q92954	1404 aa	Predicted RBP	34.72	■■■■□ 3.15
PABPC4-225	ENST00000531243	EHMT2	Q96KQ7	1210 aa		34.72	■■■■□ 3.15
PABPC4-225	ENST00000531243	UGGT2	Q9NYU1	1516 aa		34.68	■■■■□ 3.14
PABPC4-225	ENST00000531243	CARMIL2	Q6F5E8	1435 aa		34.67	■■■■□ 3.14
PABPC4-225	ENST00000531243	ERCC6L2	Q5T890	1561 aa		34.59	■■■■□ 3.13
PABPC4-225	ENST00000531243	KIAA0556	O60303	1618 aa		34.53	■■■■□ 3.12
PABPC4-225	ENST00000531243	DISP1	Q96F81	1524 aa		34.52	■■■■□ 3.12
PABPC4-225	ENST00000531243	ARAP1	Q96P48	1450 aa		34.51	■■■■□ 3.11
PABPC4-225	ENST00000531243	TNIK	Q9UKE5	1360 aa		34.49	■■■■□ 3.11
PABPC4-225	ENST00000531243	RANGAP1	P46060	587 aa	Predicted RBP	34.45	■■■■□ 3.11
PABPC4-225	ENST00000531243	CYB5RL	Q6IPT4	315 aa		34.45	■■■■□ 3.11
PABPC4-225	ENST00000531243	EFCAB5	A4FU69	1503 aa		34.45	■■■■□ 3.1
PABPC4-225	ENST00000531243	SAMD9	Q5K651	1589 aa		34.45	■■■■□ 3.1
PABPC4-225	ENST00000531243	PTPRG	P23470	1445 aa		34.39	■■■■□ 3.1
PABPC4-225	ENST00000531243	LOC105371045	A0A1W2PR82	267 aa		34.36	■■■■□ 3.09
PABPC4-225	ENST00000531243	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.31	■■■■□ 3.08
PABPC4-225	ENST00000531243	P3H3	Q8IVL6	736 aa		34.31	■■■■□ 3.08
PABPC4-225	ENST00000531243	ARHGAP35	Q9NRY4	1499 aa		34.24	■■■■□ 3.07
PABPC4-225	ENST00000531243	CLIP1	P30622	1438 aa		34.23	■■■■□ 3.07
PABPC4-225	ENST00000531243	FHOD3	Q2V2M9	1422 aa		34.21	■■■■□ 3.07
PABPC4-225	ENST00000531243	UACA	Q9BZF9	1416 aa		34.18	■■■■□ 3.06
PABPC4-225	ENST00000531243	CEP162	Q5TB80	1403 aa		34.17	■■■■□ 3.06
PABPC4-225	ENST00000531243	UHRF1BP1L	A0JNW5	1464 aa		34.13	■■■■□ 3.05
PABPC4-225	ENST00000531243	FMN1	Q68DA7	1419 aa		34.13	■■■■□ 3.05
PABPC4-225	ENST00000531243	ADCY10	Q96PN6	1610 aa		34.12	■■■■□ 3.05
PABPC4-225	ENST00000531243	ABCC2	Q92887	1545 aa		34.11	■■■■□ 3.05
PABPC4-225	ENST00000531243	NPM1	P06748	294 aa	Known RBP eCLIP	34.11	■■■■□ 3.05
PABPC4-225	ENST00000531243	ABCA8	O94911	1581 aa		34.09	■■■■□ 3.05
PABPC4-225	ENST00000531243	PLB1	Q6P1J6	1458 aa		34.07	■■■■□ 3.05
PABPC4-225	ENST00000531243	RAPGEF6	Q8TEU7	1601 aa		34.07	■■■■□ 3.04
PABPC4-225	ENST00000531243	KDM5B	Q9UGL1	1544 aa		33.94	■■■■□ 3.02
PABPC4-225	ENST00000531243	HECW1	Q76N89	1606 aa		33.93	■■■■□ 3.02
PABPC4-225	ENST00000531243	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.91	■■■■□ 3.02
PABPC4-225	ENST00000531243	MAPKBP1	O60336	1514 aa		33.86	■■■■□ 3.01
PABPC4-225	ENST00000531243	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.86	■■■■□ 3.01
PABPC4-225	ENST00000531243	NUP153	P49790	1475 aa	Known RBP	33.85	■■■■□ 3.01
PABPC4-225	ENST00000531243	CASKIN1	Q8WXD9	1431 aa		33.85	■■■■□ 3.01
PABPC4-225	ENST00000531243	PCF11	O94913	1555 aa	Known RBP	33.83	■■■■□ 3.01
PABPC4-225	ENST00000531243	FYCO1	Q9BQS8	1478 aa		33.82	■■■■□ 3
PABPC4-225	ENST00000531243	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.81	■■■■□ 3
PABPC4-225	ENST00000531243	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.81	■■■■□ 3
PABPC4-225	ENST00000531243	ATP10B	O94823	1461 aa		33.79	■■■■□ 3
PABPC4-225	ENST00000531243	ARID3C	A6NKF2	412 aa		33.76	■■■□□ 2.99
PABPC4-225	ENST00000531243	VPS8	Q8N3P4	1428 aa		33.76	■■■□□ 2.99
PABPC4-225	ENST00000531243	CCDC18	Q5T9S5	1454 aa		33.74	■■■□□ 2.99
PABPC4-225	ENST00000531243	EPRS	P07814	1512 aa	Known RBP	33.74	■■■□□ 2.99
PABPC4-225	ENST00000531243	ASXL2	Q76L83	1435 aa		33.73	■■■□□ 2.99
PABPC4-225	ENST00000531243	LRRIQ1	Q96JM4	1722 aa		33.69	■■■□□ 2.98
PABPC4-225	ENST00000531243	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.68	■■■□□ 2.98
PABPC4-225	ENST00000531243	WDR7	Q9Y4E6	1490 aa		33.67	■■■□□ 2.98
PABPC4-225	ENST00000531243	PLEKHD1	A6NEE1	506 aa		33.66	■■■□□ 2.98
PABPC4-225	ENST00000531243	CDK13	Q14004	1512 aa	Known RBP	33.66	■■■□□ 2.98
PABPC4-225	ENST00000531243	TRH	P20396	242 aa	Predicted RBP	33.65	■■■□□ 2.98
PABPC4-225	ENST00000531243	ABCC10	Q5T3U5	1492 aa		33.62	■■■□□ 2.97
PABPC4-225	ENST00000531243	DIP2B	Q9P265	1576 aa		33.59	■■■□□ 2.97
PABPC4-225	ENST00000531243	KIF13A	Q9H1H9	1805 aa		33.58	■■■□□ 2.97
PABPC4-225	ENST00000531243	FAM69C	Q0P6D2	419 aa		33.54	■■■□□ 2.96
PABPC4-225	ENST00000531243	GLI2	P10070	1586 aa		33.53	■■■□□ 2.96
PABPC4-225	ENST00000531243	APLP2	Q06481	763 aa		33.53	■■■□□ 2.96
PABPC4-225	ENST00000531243	KCNH8	Q96L42	1107 aa		33.52	■■■□□ 2.96
PABPC4-225	ENST00000531243	CFAP43	Q8NDM7	1665 aa		33.5	■■■□□ 2.95
PABPC4-225	ENST00000531243	TRO	Q12816	1431 aa	Predicted RBP	33.45	■■■□□ 2.95
PABPC4-225	ENST00000531243	MAP3K1	Q13233	1512 aa		33.45	■■■□□ 2.95
PABPC4-225	ENST00000531243	TIAM1	Q13009	1591 aa		33.45	■■■□□ 2.95
PABPC4-225	ENST00000531243	KIF14	Q15058	1648 aa		33.42	■■■□□ 2.94
PABPC4-225	ENST00000531243	MTUS2	Q5JR59	1369 aa		33.41	■■■□□ 2.94
PABPC4-225	ENST00000531243	ABCA9	Q8IUA7	1624 aa		33.39	■■■□□ 2.94
PABPC4-225	ENST00000531243	MAP3K4	Q9Y6R4	1608 aa		33.39	■■■□□ 2.93
PABPC4-225	ENST00000531243	TSPOAP1	O95153	1857 aa		33.37	■■■□□ 2.93
PABPC4-225	ENST00000531243	EHBP1L1	Q8N3D4	1523 aa		33.37	■■■□□ 2.93
PABPC4-225	ENST00000531243	MAGI3	Q5TCQ9	1506 aa		33.34	■■■□□ 2.93
PABPC4-225	ENST00000531243	CD109	Q6YHK3	1445 aa		33.32	■■■□□ 2.92
PABPC4-225	ENST00000531243	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	33.31	■■■□□ 2.92	1e-9	■■■□□ 16.1
PABPC4-225	ENST00000531243	LRRC9	Q6ZRR7	1453 aa		33.28	■■■□□ 2.92
PABPC4-225	ENST00000531243	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.27	■■■□□ 2.92
PABPC4-225	ENST00000531243	TEX14	Q8IWB6	1497 aa		33.26	■■■□□ 2.92
PABPC4-225	ENST00000531243	TTC37	Q6PGP7	1564 aa		33.26	■■■□□ 2.91
PABPC4-225	ENST00000531243	MYO5C	Q9NQX4	1742 aa		33.25	■■■□□ 2.91
PABPC4-225	ENST00000531243	PPRC1	Q5VV67	1664 aa	Known RBP	33.2	■■■□□ 2.91
PABPC4-225	ENST00000531243	CFAP74	Q9C0B2	1584 aa		33.16	■■■□□ 2.9
PABPC4-225	ENST00000531243	KANK4	Q5T7N3	995 aa	Predicted RBP	33.15	■■■□□ 2.9
PABPC4-225	ENST00000531243	ARAP3	Q8WWN8	1544 aa		33.13	■■■□□ 2.89
PABPC4-225	ENST00000531243	PLCH2	O75038	1416 aa		33.13	■■■□□ 2.89
PABPC4-225	ENST00000531243	CDC42BPA	Q5VT25	1732 aa		33.13	■■■□□ 2.89
PABPC4-225	ENST00000531243	CCNB3	Q8WWL7	1395 aa		33.12	■■■□□ 2.89
PABPC4-225	ENST00000531243	ITSN2	Q9NZM3	1697 aa		33.12	■■■□□ 2.89
PABPC4-225	ENST00000531243	PREX2	Q70Z35	1606 aa		33.11	■■■□□ 2.89
PABPC4-225	ENST00000531243	NCOA2	Q15596	1464 aa		33.11	■■■□□ 2.89
PABPC4-225	ENST00000531243	PHLDB1	Q86UU1	1377 aa		33.09	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms