RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
IFT46-208ENST00000531201 CUL7Q14999 1698 aa14.28□□□□□ -0.12
IFT46-208ENST00000531201 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
IFT46-208ENST00000531201 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
IFT46-208ENST00000531201 TTBK1Q5TCY1 1321 aaPredicted RBP14.27□□□□□ -0.12
IFT46-208ENST00000531201 CARMIL1Q5VZK9 1371 aa14.25□□□□□ -0.13
IFT46-208ENST00000531201 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
IFT46-208ENST00000531201 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
IFT46-208ENST00000531201 EFCAB5A4FU69 1503 aa14.21□□□□□ -0.13
IFT46-208ENST00000531201 CTTNBP2Q8WZ74 1663 aa14.21□□□□□ -0.14
IFT46-208ENST00000531201 NESP48681 1621 aa14.2□□□□□ -0.14
IFT46-208ENST00000531201 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
IFT46-208ENST00000531201 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
IFT46-208ENST00000531201 ABCA5Q8WWZ7 1642 aa14.19□□□□□ -0.14
IFT46-208ENST00000531201 URB2Q14146 1524 aaKnown RBP14.17□□□□□ -0.14
IFT46-208ENST00000531201 FHAD1B1AJZ9 1412 aa14.16□□□□□ -0.14
IFT46-208ENST00000531201 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
IFT46-208ENST00000531201 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
IFT46-208ENST00000531201 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
IFT46-208ENST00000531201 CLSPNQ9HAW4 1339 aa14.14□□□□□ -0.15
IFT46-208ENST00000531201 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.15
IFT46-208ENST00000531201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
IFT46-208ENST00000531201 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
IFT46-208ENST00000531201 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
IFT46-208ENST00000531201 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
IFT46-208ENST00000531201 KANK4Q5T7N3 995 aaPredicted RBP14.11□□□□□ -0.15
IFT46-208ENST00000531201 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
IFT46-208ENST00000531201 POTEHQ6S545 545 aa14.1□□□□□ -0.15
IFT46-208ENST00000531201 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
IFT46-208ENST00000531201 LRRC9Q6ZRR7 1453 aa14.08□□□□□ -0.15
IFT46-208ENST00000531201 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
IFT46-208ENST00000531201 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
IFT46-208ENST00000531201 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
IFT46-208ENST00000531201 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
IFT46-208ENST00000531201 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
IFT46-208ENST00000531201 DHX57Q6P158 1386 aaKnown RBP14.03□□□□□ -0.16
IFT46-208ENST00000531201 PBRM1Q86U86 1689 aa14.02□□□□□ -0.17
IFT46-208ENST00000531201 FMN1Q68DA7 1419 aa14.01□□□□□ -0.17
IFT46-208ENST00000531201 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
IFT46-208ENST00000531201 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
IFT46-208ENST00000531201 FHOD3Q2V2M9 1422 aa14□□□□□ -0.17
IFT46-208ENST00000531201 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
IFT46-208ENST00000531201 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
IFT46-208ENST00000531201 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
IFT46-208ENST00000531201 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.97□□□□□ -0.17
IFT46-208ENST00000531201 ADAMTS12P58397 1594 aa13.96□□□□□ -0.17
IFT46-208ENST00000531201 PHLDB1Q86UU1 1377 aa13.94□□□□□ -0.18
IFT46-208ENST00000531201 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
IFT46-208ENST00000531201 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
IFT46-208ENST00000531201 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
IFT46-208ENST00000531201 WDR62O43379 1518 aa13.92□□□□□ -0.18
IFT46-208ENST00000531201 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
IFT46-208ENST00000531201 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
IFT46-208ENST00000531201 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
IFT46-208ENST00000531201 SETD5Q9C0A6 1442 aa13.88□□□□□ -0.19
IFT46-208ENST00000531201 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
IFT46-208ENST00000531201 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
IFT46-208ENST00000531201 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
IFT46-208ENST00000531201 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
IFT46-208ENST00000531201 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
IFT46-208ENST00000531201 FGD6Q6ZV73 1430 aa13.85□□□□□ -0.19
IFT46-208ENST00000531201 ARHGEF11O15085 1522 aa13.84□□□□□ -0.19
IFT46-208ENST00000531201 UGGT2Q9NYU1 1516 aa13.84□□□□□ -0.19
IFT46-208ENST00000531201 P3H3Q8IVL6 736 aa13.84□□□□□ -0.19
IFT46-208ENST00000531201 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
IFT46-208ENST00000531201 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
IFT46-208ENST00000531201 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
IFT46-208ENST00000531201 DSG3P32926 999 aa13.8□□□□□ -0.2
IFT46-208ENST00000531201 ACIN1Q9UKV3 1341 aaKnown RBP13.79□□□□□ -0.2
IFT46-208ENST00000531201 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
IFT46-208ENST00000531201 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
IFT46-208ENST00000531201 TCOF1Q13428 1488 aaKnown RBP13.76□□□□□ -0.21
IFT46-208ENST00000531201 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
IFT46-208ENST00000531201 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
IFT46-208ENST00000531201 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
IFT46-208ENST00000531201 ITGAEP38570 1179 aa13.75□□□□□ -0.21
IFT46-208ENST00000531201 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
IFT46-208ENST00000531201 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
IFT46-208ENST00000531201 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
IFT46-208ENST00000531201 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
IFT46-208ENST00000531201 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
IFT46-208ENST00000531201 GCC2Q8IWJ2 1684 aa13.74□□□□□ -0.21
IFT46-208ENST00000531201 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
IFT46-208ENST00000531201 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
IFT46-208ENST00000531201 TIMELESSQ9UNS1 1208 aa13.74□□□□□ -0.21
IFT46-208ENST00000531201 AKNAQ7Z591 1439 aa13.73□□□□□ -0.21
IFT46-208ENST00000531201 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
IFT46-208ENST00000531201 CAPN15O75808 1086 aa13.73□□□□□ -0.21
IFT46-208ENST00000531201 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
IFT46-208ENST00000531201 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
IFT46-208ENST00000531201 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
IFT46-208ENST00000531201 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
IFT46-208ENST00000531201 MIA2Q96PC5 1412 aa13.7□□□□□ -0.22
IFT46-208ENST00000531201 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
IFT46-208ENST00000531201 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
IFT46-208ENST00000531201 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
IFT46-208ENST00000531201 MIER1Q8N108 512 aa13.67□□□□□ -0.22
IFT46-208ENST00000531201 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
IFT46-208ENST00000531201 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
IFT46-208ENST00000531201 NAIPQ13075 1403 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms