RNA–Protein interactions for RNA: ENST00000531010.1

CHID1-218, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-218ENST00000531010 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
CHID1-218ENST00000531010 KIAA0586Q9BVV6 1533 aa32.14■■■□□ 2.74
CHID1-218ENST00000531010 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
CHID1-218ENST00000531010 IQGAP2Q13576 1575 aa32.1■■■□□ 2.73
CHID1-218ENST00000531010 ERCC6L2Q5T890 1561 aa32.04■■■□□ 2.72
CHID1-218ENST00000531010 LOC105371045A0A1W2PR82 267 aa31.97■■■□□ 2.71
CHID1-218ENST00000531010 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
CHID1-218ENST00000531010 UBTFP17480 764 aaKnown RBP31.95■■■□□ 2.71
CHID1-218ENST00000531010 JPH4Q96JJ6 628 aa31.95■■■□□ 2.71
CHID1-218ENST00000531010 RIMBP3CA6NJZ7 1639 aa31.95■■■□□ 2.71
CHID1-218ENST00000531010 RIMBP3BA6NNM3 1639 aa31.95■■■□□ 2.71
CHID1-218ENST00000531010 RIMBP3Q9UFD9 1639 aa31.95■■■□□ 2.71
CHID1-218ENST00000531010 ARHGEF11O15085 1522 aa31.95■■■□□ 2.7
CHID1-218ENST00000531010 UGGT2Q9NYU1 1516 aa31.93■■■□□ 2.7
CHID1-218ENST00000531010 PRG4Q92954 1404 aaPredicted RBP31.91■■■□□ 2.7
CHID1-218ENST00000531010 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
CHID1-218ENST00000531010 KIAA0556O60303 1618 aa31.83■■■□□ 2.69
CHID1-218ENST00000531010 TNIKQ9UKE5 1360 aa31.82■■■□□ 2.69
CHID1-218ENST00000531010 SAMD9Q5K651 1589 aa31.81■■■□□ 2.68
CHID1-218ENST00000531010 RANGAP1P46060 587 aaPredicted RBP31.81■■■□□ 2.68
CHID1-218ENST00000531010 ARAP1Q96P48 1450 aa31.77■■■□□ 2.68
CHID1-218ENST00000531010 CARMIL2Q6F5E8 1435 aa31.68■■■□□ 2.66
CHID1-218ENST00000531010 ARHGAP35Q9NRY4 1499 aa31.68■■■□□ 2.66
CHID1-218ENST00000531010 P3H3Q8IVL6 736 aa31.67■■■□□ 2.66
CHID1-218ENST00000531010 EFCAB5A4FU69 1503 aa31.66■■■□□ 2.66
CHID1-218ENST00000531010 FHOD3Q2V2M9 1422 aa31.63■■■□□ 2.65
CHID1-218ENST00000531010 CEP162Q5TB80 1403 aa31.62■■■□□ 2.65
CHID1-218ENST00000531010 TTBK1Q5TCY1 1321 aaPredicted RBP31.59■■■□□ 2.65
CHID1-218ENST00000531010 CLIP1P30622 1438 aa31.58■■■□□ 2.65
CHID1-218ENST00000531010 PTPRGP23470 1445 aa31.54■■■□□ 2.64
CHID1-218ENST00000531010 CYB5RLQ6IPT4 315 aa31.53■■■□□ 2.64
CHID1-218ENST00000531010 ADCY10Q96PN6 1610 aa31.46■■■□□ 2.63
CHID1-218ENST00000531010 PLB1Q6P1J6 1458 aa31.46■■■□□ 2.63
CHID1-218ENST00000531010 ABCA8O94911 1581 aa31.44■■■□□ 2.62
CHID1-218ENST00000531010 UACAQ9BZF9 1416 aa31.37■■■□□ 2.61
CHID1-218ENST00000531010 RAPGEF6Q8TEU7 1601 aa31.37■■■□□ 2.61
CHID1-218ENST00000531010 ABCC2Q92887 1545 aa31.35■■■□□ 2.61
CHID1-218ENST00000531010 PCF11O94913 1555 aaKnown RBP31.33■■■□□ 2.61
CHID1-218ENST00000531010 UHRF1BP1LA0JNW5 1464 aa31.32■■■□□ 2.6
CHID1-218ENST00000531010 LRRIQ1Q96JM4 1722 aa31.29■■■□□ 2.6
CHID1-218ENST00000531010 FMN1Q68DA7 1419 aa31.29■■■□□ 2.6
CHID1-218ENST00000531010 NUP153P49790 1475 aaKnown RBP31.26■■■□□ 2.59
CHID1-218ENST00000531010 ZCCHC11Q5TAX3 1644 aaKnown RBP31.24■■■□□ 2.59
CHID1-218ENST00000531010 ARID3CA6NKF2 412 aa31.2■■■□□ 2.59
CHID1-218ENST00000531010 HECW1Q76N89 1606 aa31.2■■■□□ 2.58
CHID1-218ENST00000531010 KDM5BQ9UGL1 1544 aa31.19■■■□□ 2.58
CHID1-218ENST00000531010 CASKIN1Q8WXD9 1431 aa31.18■■■□□ 2.58
CHID1-218ENST00000531010 VPS8Q8N3P4 1428 aa31.16■■■□□ 2.58
CHID1-218ENST00000531010 ATP10BO94823 1461 aa31.15■■■□□ 2.58
CHID1-218ENST00000531010 CDK13Q14004 1512 aaKnown RBP31.15■■■□□ 2.58
CHID1-218ENST00000531010 FYCO1Q9BQS8 1478 aa31.14■■■□□ 2.58
CHID1-218ENST00000531010 EPRSP07814 1512 aaKnown RBP31.09■■■□□ 2.57
CHID1-218ENST00000531010 ATP1B4Q9UN42 357 aaPredicted RBP31.09■■■□□ 2.57
CHID1-218ENST00000531010 MAPKBP1O60336 1514 aa31.04■■■□□ 2.56
CHID1-218ENST00000531010 ASXL2Q76L83 1435 aa30.99■■■□□ 2.55
CHID1-218ENST00000531010 NPM1P06748 294 aaKnown RBP eCLIP30.99■■■□□ 2.55
CHID1-218ENST00000531010 CFAP43Q8NDM7 1665 aa30.98■■■□□ 2.55
CHID1-218ENST00000531010 MAGI3Q5TCQ9 1506 aa30.97■■■□□ 2.55
CHID1-218ENST00000531010 CCDC18Q5T9S5 1454 aa30.95■■■□□ 2.55
CHID1-218ENST00000531010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.92■■■□□ 2.54
CHID1-218ENST00000531010 HNRNPUL2Q1KMD3 747 aaKnown RBP30.92■■■□□ 2.54
CHID1-218ENST00000531010 WDR7Q9Y4E6 1490 aa30.91■■■□□ 2.54
CHID1-218ENST00000531010 TIAM1Q13009 1591 aa30.91■■■□□ 2.54
CHID1-218ENST00000531010 KIF13AQ9H1H9 1805 aa30.91■■■□□ 2.54
CHID1-218ENST00000531010 DIP2BQ9P265 1576 aa30.88■■■□□ 2.53
CHID1-218ENST00000531010 ABCC10Q5T3U5 1492 aa30.82■■■□□ 2.53
CHID1-218ENST00000531010 KIF14Q15058 1648 aa30.82■■■□□ 2.52
CHID1-218ENST00000531010 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
CHID1-218ENST00000531010 TROQ12816 1431 aaPredicted RBP30.78■■■□□ 2.52
CHID1-218ENST00000531010 KCNH8Q96L42 1107 aa30.77■■■□□ 2.52
CHID1-218ENST00000531010 PLEKHD1A6NEE1 506 aa30.76■■■□□ 2.51
CHID1-218ENST00000531010 GLI2P10070 1586 aa30.75■■■□□ 2.51
CHID1-218ENST00000531010 KANK4Q5T7N3 995 aaPredicted RBP30.74■■■□□ 2.51
CHID1-218ENST00000531010 TTC37Q6PGP7 1564 aa30.74■■■□□ 2.51
CHID1-218ENST00000531010 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
CHID1-218ENST00000531010 LRRC9Q6ZRR7 1453 aa30.72■■■□□ 2.51
CHID1-218ENST00000531010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.72■■■□□ 2.51
CHID1-218ENST00000531010 ABCA9Q8IUA7 1624 aa30.71■■■□□ 2.51
CHID1-218ENST00000531010 MAP3K4Q9Y6R4 1608 aa30.7■■■□□ 2.51
CHID1-218ENST00000531010 FAM69CQ0P6D2 419 aa30.69■■■□□ 2.5
CHID1-218ENST00000531010 CDK11AQ9UQ88 783 aaPredicted RBP30.69■■■□□ 2.5
CHID1-218ENST00000531010 MTUS2Q5JR59 1369 aa30.67■■■□□ 2.5
CHID1-218ENST00000531010 TSPOAP1O95153 1857 aa30.67■■■□□ 2.5
CHID1-218ENST00000531010 PPRC1Q5VV67 1664 aaKnown RBP30.66■■■□□ 2.5
CHID1-218ENST00000531010 TRHP20396 242 aaPredicted RBP30.66■■■□□ 2.5
CHID1-218ENST00000531010 SUPT6HQ7KZ85 1726 aaKnown RBP30.61■■■□□ 2.49
CHID1-218ENST00000531010 APLP2Q06481 763 aa30.6■■■□□ 2.49
CHID1-218ENST00000531010 PPARGC1BQ86YN6 1023 aaKnown RBP30.58■■■□□ 2.49
CHID1-218ENST00000531010 CDC42BPAQ5VT25 1732 aa30.58■■■□□ 2.49
CHID1-218ENST00000531010 MYO5CQ9NQX4 1742 aa30.57■■■□□ 2.48
CHID1-218ENST00000531010 NCOA2Q15596 1464 aa30.57■■■□□ 2.48
CHID1-218ENST00000531010 CDC42BPBQ9Y5S2 1711 aa30.54■■■□□ 2.48
CHID1-218ENST00000531010 CD109Q6YHK3 1445 aa30.54■■■□□ 2.48
CHID1-218ENST00000531010 PREX2Q70Z35 1606 aa30.51■■■□□ 2.48
CHID1-218ENST00000531010 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
CHID1-218ENST00000531010 PLCH2O75038 1416 aa30.44■■■□□ 2.46
CHID1-218ENST00000531010 ITSN2Q9NZM3 1697 aa30.42■■■□□ 2.46
CHID1-218ENST00000531010 PHLDB1Q86UU1 1377 aa30.41■■■□□ 2.46
CHID1-218ENST00000531010 CCNB3Q8WWL7 1395 aa30.41■■■□□ 2.46
CHID1-218ENST00000531010 ARAP3Q8WWN8 1544 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms