RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
UBASH3B-207ENST00000530917 CHD1O14646 1710 aa19.3■□□□□ 0.68
UBASH3B-207ENST00000530917 FBLN2P98095 1184 aa19.27■□□□□ 0.68
UBASH3B-207ENST00000530917 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
UBASH3B-207ENST00000530917 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
UBASH3B-207ENST00000530917 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
UBASH3B-207ENST00000530917 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
UBASH3B-207ENST00000530917 NUP160Q12769 1436 aa19.22■□□□□ 0.67
UBASH3B-207ENST00000530917 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
UBASH3B-207ENST00000530917 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
UBASH3B-207ENST00000530917 CLIP1P30622 1438 aa19.19■□□□□ 0.66
UBASH3B-207ENST00000530917 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
UBASH3B-207ENST00000530917 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
UBASH3B-207ENST00000530917 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
UBASH3B-207ENST00000530917 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
UBASH3B-207ENST00000530917 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
UBASH3B-207ENST00000530917 ARHGAP35Q9NRY4 1499 aa19.1■□□□□ 0.65
UBASH3B-207ENST00000530917 SAMD9Q5K651 1589 aa19.09■□□□□ 0.65
UBASH3B-207ENST00000530917 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
UBASH3B-207ENST00000530917 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
UBASH3B-207ENST00000530917 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
UBASH3B-207ENST00000530917 ARAP1Q96P48 1450 aa19.04■□□□□ 0.64
UBASH3B-207ENST00000530917 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
UBASH3B-207ENST00000530917 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
UBASH3B-207ENST00000530917 P3H3Q8IVL6 736 aa19■□□□□ 0.63
UBASH3B-207ENST00000530917 DISP1Q96F81 1524 aa19■□□□□ 0.63
UBASH3B-207ENST00000530917 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
UBASH3B-207ENST00000530917 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
UBASH3B-207ENST00000530917 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
UBASH3B-207ENST00000530917 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
UBASH3B-207ENST00000530917 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
UBASH3B-207ENST00000530917 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
UBASH3B-207ENST00000530917 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
UBASH3B-207ENST00000530917 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
UBASH3B-207ENST00000530917 PCF11O94913 1555 aaKnown RBP18.83■□□□□ 0.6
UBASH3B-207ENST00000530917 FYCO1Q9BQS8 1478 aa18.83■□□□□ 0.6
UBASH3B-207ENST00000530917 PTPRGP23470 1445 aa18.8■□□□□ 0.6
UBASH3B-207ENST00000530917 APLP2Q06481 763 aa18.79■□□□□ 0.6
UBASH3B-207ENST00000530917 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
UBASH3B-207ENST00000530917 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
UBASH3B-207ENST00000530917 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
UBASH3B-207ENST00000530917 LRRIQ1Q96JM4 1722 aa18.77■□□□□ 0.59
UBASH3B-207ENST00000530917 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
UBASH3B-207ENST00000530917 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
UBASH3B-207ENST00000530917 ABCA8O94911 1581 aa18.75■□□□□ 0.59
UBASH3B-207ENST00000530917 PLB1Q6P1J6 1458 aa18.73■□□□□ 0.59
UBASH3B-207ENST00000530917 CFAP43Q8NDM7 1665 aa18.73■□□□□ 0.59
UBASH3B-207ENST00000530917 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
UBASH3B-207ENST00000530917 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
UBASH3B-207ENST00000530917 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
UBASH3B-207ENST00000530917 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
UBASH3B-207ENST00000530917 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
UBASH3B-207ENST00000530917 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
UBASH3B-207ENST00000530917 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
UBASH3B-207ENST00000530917 ABCC2Q92887 1545 aa18.64■□□□□ 0.58
UBASH3B-207ENST00000530917 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
UBASH3B-207ENST00000530917 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
UBASH3B-207ENST00000530917 CDK13Q14004 1512 aaKnown RBP18.62■□□□□ 0.57
UBASH3B-207ENST00000530917 ATP10BO94823 1461 aa18.61■□□□□ 0.57
UBASH3B-207ENST00000530917 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
UBASH3B-207ENST00000530917 ADCY10Q96PN6 1610 aa18.58■□□□□ 0.56
UBASH3B-207ENST00000530917 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
UBASH3B-207ENST00000530917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
UBASH3B-207ENST00000530917 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
UBASH3B-207ENST00000530917 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
UBASH3B-207ENST00000530917 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
UBASH3B-207ENST00000530917 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
UBASH3B-207ENST00000530917 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
UBASH3B-207ENST00000530917 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
UBASH3B-207ENST00000530917 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.56
UBASH3B-207ENST00000530917 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
UBASH3B-207ENST00000530917 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
UBASH3B-207ENST00000530917 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
UBASH3B-207ENST00000530917 NPM1P06748 294 aaKnown RBP eCLIP18.46■□□□□ 0.55
UBASH3B-207ENST00000530917 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
UBASH3B-207ENST00000530917 KIF14Q15058 1648 aa18.41■□□□□ 0.54
UBASH3B-207ENST00000530917 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
UBASH3B-207ENST00000530917 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
UBASH3B-207ENST00000530917 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
UBASH3B-207ENST00000530917 ABCC10Q5T3U5 1492 aa18.36■□□□□ 0.53
UBASH3B-207ENST00000530917 MYOM3Q5VTT5 1437 aa18.36■□□□□ 0.53
UBASH3B-207ENST00000530917 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
UBASH3B-207ENST00000530917 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
UBASH3B-207ENST00000530917 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
UBASH3B-207ENST00000530917 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
UBASH3B-207ENST00000530917 ILDR1Q86SU0 546 aaPredicted RBP18.33■□□□□ 0.52
UBASH3B-207ENST00000530917 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
UBASH3B-207ENST00000530917 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.52
UBASH3B-207ENST00000530917 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
UBASH3B-207ENST00000530917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.32■□□□□ 0.52
UBASH3B-207ENST00000530917 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
UBASH3B-207ENST00000530917 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
UBASH3B-207ENST00000530917 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
UBASH3B-207ENST00000530917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
UBASH3B-207ENST00000530917 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
UBASH3B-207ENST00000530917 TTC37Q6PGP7 1564 aa18.29■□□□□ 0.52
UBASH3B-207ENST00000530917 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
UBASH3B-207ENST00000530917 PTPN23Q9H3S7 1636 aa18.28■□□□□ 0.52
UBASH3B-207ENST00000530917 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.52
UBASH3B-207ENST00000530917 PREX2Q70Z35 1606 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms