RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 FHOD3Q2V2M9 1422 aa17.85■□□□□ 0.45
BDNF-215ENST00000530861 NEFLP07196 543 aa17.84■□□□□ 0.45
BDNF-215ENST00000530861 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
BDNF-215ENST00000530861 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
BDNF-215ENST00000530861 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
BDNF-215ENST00000530861 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
BDNF-215ENST00000530861 IGF1RP08069 1367 aa17.79■□□□□ 0.44
BDNF-215ENST00000530861 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
BDNF-215ENST00000530861 ANP32CO43423 234 aa17.79■□□□□ 0.44
BDNF-215ENST00000530861 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
BDNF-215ENST00000530861 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.43
BDNF-215ENST00000530861 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
BDNF-215ENST00000530861 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
BDNF-215ENST00000530861 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
BDNF-215ENST00000530861 RAB3GAP2Q9H2M9 1393 aa17.71■□□□□ 0.43
BDNF-215ENST00000530861 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
BDNF-215ENST00000530861 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
BDNF-215ENST00000530861 FKBP8Q14318 412 aa17.68■□□□□ 0.42
BDNF-215ENST00000530861 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
BDNF-215ENST00000530861 HNRNPUQ00839 825 aaKnown RBP eCLIP17.66■□□□□ 0.42
BDNF-215ENST00000530861 CDK11AQ9UQ88 783 aaPredicted RBP17.66■□□□□ 0.42
BDNF-215ENST00000530861 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
BDNF-215ENST00000530861 CFDP1Q9UEE9 299 aaPredicted RBP17.64■□□□□ 0.41
BDNF-215ENST00000530861 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
BDNF-215ENST00000530861 KIF21BO75037 1637 aa17.62■□□□□ 0.41
BDNF-215ENST00000530861 CUX1P39880 1505 aa17.62■□□□□ 0.41
BDNF-215ENST00000530861 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
BDNF-215ENST00000530861 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
BDNF-215ENST00000530861 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
BDNF-215ENST00000530861 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.41
BDNF-215ENST00000530861 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
BDNF-215ENST00000530861 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
BDNF-215ENST00000530861 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
BDNF-215ENST00000530861 PLEKHD1A6NEE1 506 aa17.55■□□□□ 0.4
BDNF-215ENST00000530861 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
BDNF-215ENST00000530861 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
BDNF-215ENST00000530861 CFTRP13569 1480 aa17.54■□□□□ 0.4
BDNF-215ENST00000530861 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
BDNF-215ENST00000530861 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
BDNF-215ENST00000530861 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
BDNF-215ENST00000530861 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
BDNF-215ENST00000530861 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
BDNF-215ENST00000530861 HNRNPMP52272 730 aaKnown RBP eCLIP17.46■□□□□ 0.39
BDNF-215ENST00000530861 PRXQ9BXM0 1461 aa17.46■□□□□ 0.39
BDNF-215ENST00000530861 EIF4G2P78344 907 aaKnown RBP eCLIP17.44■□□□□ 0.38
BDNF-215ENST00000530861 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
BDNF-215ENST00000530861 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
BDNF-215ENST00000530861 PPP1R15AO75807 674 aaPredicted RBP17.42■□□□□ 0.38
BDNF-215ENST00000530861 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
BDNF-215ENST00000530861 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
BDNF-215ENST00000530861 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
BDNF-215ENST00000530861 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
BDNF-215ENST00000530861 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
BDNF-215ENST00000530861 PKD2Q13563 968 aa17.39■□□□□ 0.37
BDNF-215ENST00000530861 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
BDNF-215ENST00000530861 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
BDNF-215ENST00000530861 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
BDNF-215ENST00000530861 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
BDNF-215ENST00000530861 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
BDNF-215ENST00000530861 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
BDNF-215ENST00000530861 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
BDNF-215ENST00000530861 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
BDNF-215ENST00000530861 LRRC9Q6ZRR7 1453 aa17.27■□□□□ 0.36
BDNF-215ENST00000530861 CLSPNQ9HAW4 1339 aa17.25■□□□□ 0.35
BDNF-215ENST00000530861 NUTM2DQ5VT03 806 aaPredicted RBP17.25■□□□□ 0.35
BDNF-215ENST00000530861 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
BDNF-215ENST00000530861 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
BDNF-215ENST00000530861 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
BDNF-215ENST00000530861 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
BDNF-215ENST00000530861 NUP155O75694 1391 aa17.21■□□□□ 0.35
BDNF-215ENST00000530861 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
BDNF-215ENST00000530861 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
BDNF-215ENST00000530861 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
BDNF-215ENST00000530861 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
BDNF-215ENST00000530861 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
BDNF-215ENST00000530861 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
BDNF-215ENST00000530861 GGT6Q6P531 493 aa17.16■□□□□ 0.34
BDNF-215ENST00000530861 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
BDNF-215ENST00000530861 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
BDNF-215ENST00000530861 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
BDNF-215ENST00000530861 MLECQ14165 292 aa17.14■□□□□ 0.33
BDNF-215ENST00000530861 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
BDNF-215ENST00000530861 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
BDNF-215ENST00000530861 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
BDNF-215ENST00000530861 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
BDNF-215ENST00000530861 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
BDNF-215ENST00000530861 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
BDNF-215ENST00000530861 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
BDNF-215ENST00000530861 MYT1Q01538 1121 aa17.11■□□□□ 0.33
BDNF-215ENST00000530861 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
BDNF-215ENST00000530861 ST20-MTHFSA0A0A6YYL1 179 aa17.1■□□□□ 0.33
BDNF-215ENST00000530861 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
BDNF-215ENST00000530861 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
BDNF-215ENST00000530861 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
BDNF-215ENST00000530861 CASKIN1Q8WXD9 1431 aa17.06■□□□□ 0.32
BDNF-215ENST00000530861 KIF3BO15066 747 aa17.05■□□□□ 0.32
BDNF-215ENST00000530861 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
BDNF-215ENST00000530861 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
BDNF-215ENST00000530861 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
BDNF-215ENST00000530861 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms